RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 Q6AWC8 147 aa18.28■□□□□ 0.52
PABPN1-202ENST00000397276 CLEC2AQ6UVW9 174 aa18.28■□□□□ 0.52
PABPN1-202ENST00000397276 SMIM15Q7Z3B0 74 aa18.28■□□□□ 0.52
PABPN1-202ENST00000397276 CACNA1AO00555 2505 aa18.28■□□□□ 0.52
PABPN1-202ENST00000397276 TRBV7-1A0A0A6YYK4 115 aa18.28■□□□□ 0.52
PABPN1-202ENST00000397276 TRGV3P03979 118 aa18.28■□□□□ 0.52
PABPN1-202ENST00000397276 PRSS57Q6UWY2 283 aa18.28■□□□□ 0.52
PABPN1-202ENST00000397276 METTL26Q96S19 204 aa18.27■□□□□ 0.52
PABPN1-202ENST00000397276 D6R8Y8 96 aa18.27■□□□□ 0.51
PABPN1-202ENST00000397276 TWIST1Q15672 202 aa18.27■□□□□ 0.51
PABPN1-202ENST00000397276 OR10AG1Q8NH19 301 aa18.27■□□□□ 0.51
PABPN1-202ENST00000397276 RAB37Q96AX2 223 aa18.27■□□□□ 0.51
PABPN1-202ENST00000397276 H3BUT2 72 aa18.26■□□□□ 0.51
PABPN1-202ENST00000397276 IL17RELQ6ZVW7 336 aa18.26■□□□□ 0.51
PABPN1-202ENST00000397276 PPIFP30405 207 aaKnown RBP18.26■□□□□ 0.51
PABPN1-202ENST00000397276 ACACBO00763 2458 aa18.26■□□□□ 0.51
PABPN1-202ENST00000397276 TRBV12-3P01733 135 aa18.25■□□□□ 0.51
PABPN1-202ENST00000397276 BMI1P35226 326 aa18.25■□□□□ 0.51
PABPN1-202ENST00000397276 WFDC3Q8IUB2 231 aa18.25■□□□□ 0.51
PABPN1-202ENST00000397276 H3BUX3 64 aa18.25■□□□□ 0.51
PABPN1-202ENST00000397276 K7ERU9 68 aa18.25■□□□□ 0.51
PABPN1-202ENST00000397276 FER1L6-AS1Q8NA97 138 aa18.25■□□□□ 0.51
PABPN1-202ENST00000397276 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.25■□□□□ 0.511e-12■■■■□ 19.6
PABPN1-202ENST00000397276 SIGLEC8Q9NYZ4 499 aa18.25■□□□□ 0.51
PABPN1-202ENST00000397276 A0A1B0GW15 77 aa18.24■□□□□ 0.51
PABPN1-202ENST00000397276 IGHV3-11P01762 117 aa18.24■□□□□ 0.51
PABPN1-202ENST00000397276 RAB9AP51151 201 aa18.24■□□□□ 0.51
PABPN1-202ENST00000397276 CACNG7P62955 275 aa18.24■□□□□ 0.51
PABPN1-202ENST00000397276 KLK9Q2XQG4 91 aa18.24■□□□□ 0.51
PABPN1-202ENST00000397276 ZNF575Q86XF7 245 aa18.24■□□□□ 0.51
PABPN1-202ENST00000397276 MSRB1Q9NZV6 116 aa18.24■□□□□ 0.51
PABPN1-202ENST00000397276 KLK9Q9UKQ9 250 aa18.24■□□□□ 0.51
PABPN1-202ENST00000397276 SMKR1H3BMG3 65 aa18.24■□□□□ 0.51
PABPN1-202ENST00000397276 LCNL1Q6ZST4 164 aa18.24■□□□□ 0.51
PABPN1-202ENST00000397276 BLCAPP62952 87 aa18.23■□□□□ 0.51
PABPN1-202ENST00000397276 Q6ZS46 218 aa18.23■□□□□ 0.51
PABPN1-202ENST00000397276 UFSP1Q6NVU6 142 aa18.23■□□□□ 0.51
PABPN1-202ENST00000397276 ZNF493Q6ZR52 646 aa18.23■□□□□ 0.51
PABPN1-202ENST00000397276 COX8CQ7Z4L0 72 aa18.23■□□□□ 0.51
PABPN1-202ENST00000397276 FAM104BQ5XKR9 115 aa18.22■□□□□ 0.51
PABPN1-202ENST00000397276 C8orf86Q6ZUL3 223 aa18.22■□□□□ 0.51
PABPN1-202ENST00000397276 AGPAT4-IT1Q9H0P7 198 aa18.22■□□□□ 0.51
PABPN1-202ENST00000397276 MYO18BQ8IUG5 2567 aa18.22■□□□□ 0.51
PABPN1-202ENST00000397276 DOPEY1Q5JWR5 2465 aa18.22■□□□□ 0.51
PABPN1-202ENST00000397276 TRAV8-2A0A0B4J237 113 aa18.22■□□□□ 0.51
PABPN1-202ENST00000397276 FABP5P3A8MUU1 101 aa18.22■□□□□ 0.51
PABPN1-202ENST00000397276 ARL3P36405 182 aa18.22■□□□□ 0.51
PABPN1-202ENST00000397276 TM4SF20Q53R12 229 aa18.22■□□□□ 0.51
PABPN1-202ENST00000397276 PCP2Q8IVA1 136 aa18.22■□□□□ 0.51
PABPN1-202ENST00000397276 GATD1Q8NB37 220 aa18.22■□□□□ 0.51
PABPN1-202ENST00000397276 SEC11AP67812 179 aa18.21■□□□□ 0.51
PABPN1-202ENST00000397276 UNQ9165/PRO28630Q6UXU0 137 aa18.21■□□□□ 0.51
PABPN1-202ENST00000397276 KIR3DS1Q14943 382 aa18.21■□□□□ 0.51
PABPN1-202ENST00000397276 MRPL51Q4U2R6 128 aaKnown RBP18.21■□□□□ 0.51
PABPN1-202ENST00000397276 PRELID3AQ96N28 172 aa18.21■□□□□ 0.51
PABPN1-202ENST00000397276 SLC50A1Q9BRV3 221 aa18.21■□□□□ 0.51
PABPN1-202ENST00000397276 KLK15Q9H2R5 256 aa18.2■□□□□ 0.5
PABPN1-202ENST00000397276 FBLL1A6NHQ2 334 aaKnown RBP18.2■□□□□ 0.5
PABPN1-202ENST00000397276 C9orf118A6NHY6 69 aa18.2■□□□□ 0.5
PABPN1-202ENST00000397276 AVPP01185 164 aa18.19■□□□□ 0.5
PABPN1-202ENST00000397276 Q6ZQT7 251 aa18.19■□□□□ 0.5
PABPN1-202ENST00000397276 AP1S3Q96PC3 154 aa18.19■□□□□ 0.5
PABPN1-202ENST00000397276 HIF1ANQ9NWT6 349 aa18.19■□□□□ 0.5
PABPN1-202ENST00000397276 MSMBP08118 114 aa18.19■□□□□ 0.5
PABPN1-202ENST00000397276 C19orf54Q5BKX5 351 aa18.19■□□□□ 0.5
PABPN1-202ENST00000397276 C16orf92Q96LL3 132 aa18.19■□□□□ 0.5
PABPN1-202ENST00000397276 ZFYVE26Q68DK2 2539 aa18.18■□□□□ 0.5
PABPN1-202ENST00000397276 CSPG4Q6UVK1 2322 aa18.18■□□□□ 0.5
PABPN1-202ENST00000397276 IGLC6P0CF74 106 aa18.18■□□□□ 0.5
PABPN1-202ENST00000397276 NMUP48645 174 aa18.18■□□□□ 0.5
PABPN1-202ENST00000397276 BOD1L2Q8IYS8 172 aa18.18■□□□□ 0.5
PABPN1-202ENST00000397276 ORMDL3Q8N138 153 aa18.18■□□□□ 0.5
PABPN1-202ENST00000397276 FAM223BA6NKX1 122 aa18.18■□□□□ 0.5
PABPN1-202ENST00000397276 NDUFS8O00217 210 aa18.18■□□□□ 0.5
PABPN1-202ENST00000397276 SMAD7O15105 426 aaKnown RBP18.18■□□□□ 0.5
PABPN1-202ENST00000397276 FAM223AQ8IWN6 122 aa18.18■□□□□ 0.5
PABPN1-202ENST00000397276 IGKV3-7A0A075B6H7 116 aa18.17■□□□□ 0.5
PABPN1-202ENST00000397276 J3KRW8 73 aa18.17■□□□□ 0.5
PABPN1-202ENST00000397276 PRB1P04280 392 aa18.17■□□□□ 0.5
PABPN1-202ENST00000397276 PF4V1P10720 104 aa18.17■□□□□ 0.5
PABPN1-202ENST00000397276 CKS2P33552 79 aa18.17■□□□□ 0.5
PABPN1-202ENST00000397276 TMEM78Q5T7P6 136 aa18.17■□□□□ 0.5
PABPN1-202ENST00000397276 A0A0G2JLM5 398 aa18.17■□□□□ 0.5
PABPN1-202ENST00000397276 H3BRM9 83 aa18.17■□□□□ 0.5
PABPN1-202ENST00000397276 TTTY13Q9BZ97 58 aa18.17■□□□□ 0.5
PABPN1-202ENST00000397276 C11orf21Q9P2W6 132 aa18.16■□□□□ 0.5
PABPN1-202ENST00000397276 DKK2Q9UBU2 259 aa18.16■□□□□ 0.5
PABPN1-202ENST00000397276 ADAMTSL5Q6ZMM2 481 aa18.16■□□□□ 0.5
PABPN1-202ENST00000397276 U3KQE9 123 aa18.16■□□□□ 0.5
PABPN1-202ENST00000397276 A1L4Q6 167 aa18.15■□□□□ 0.5
PABPN1-202ENST00000397276 GAS8-AS1O95177 125 aa18.15■□□□□ 0.5
PABPN1-202ENST00000397276 DEFB1P60022 68 aa18.15■□□□□ 0.5
PABPN1-202ENST00000397276 RPL11P62913 178 aaKnown RBP18.15■□□□□ 0.5
PABPN1-202ENST00000397276 C18orf15Q96N68 181 aa18.15■□□□□ 0.5
PABPN1-202ENST00000397276 IGKV3D-20A0A0C4DH25 116 aa18.14■□□□□ 0.5
PABPN1-202ENST00000397276 NPYP01303 97 aa18.14■□□□□ 0.5
PABPN1-202ENST00000397276 GTF2H5Q6ZYL4 71 aa18.14■□□□□ 0.5
PABPN1-202ENST00000397276 RBAKDNA6NC62 111 aa18.14■□□□□ 0.49
PABPN1-202ENST00000397276 A6NDN8 102 aa18.14■□□□□ 0.49
PABPN1-202ENST00000397276 K7EP34 96 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms