RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 TRGV1A0A0A0MS02 117 aa12.3□□□□□ -0.44
UPK3A-202ENST00000396082 G3V3Q6 166 aa12.3□□□□□ -0.44
UPK3A-202ENST00000396082 SMLR1H3BR10 107 aa12.3□□□□□ -0.44
UPK3A-202ENST00000396082 TAAR5O14804 337 aa12.3□□□□□ -0.44
UPK3A-202ENST00000396082 GNG5P63218 68 aa12.3□□□□□ -0.44
UPK3A-202ENST00000396082 Q6ZTI0 123 aa12.3□□□□□ -0.44
UPK3A-202ENST00000396082 C11orf72Q8NBR9 251 aa12.3□□□□□ -0.44
UPK3A-202ENST00000396082 TMED6Q8WW62 240 aa12.3□□□□□ -0.44
UPK3A-202ENST00000396082 TMEM167BQ9NRX6 74 aa12.3□□□□□ -0.44
UPK3A-202ENST00000396082 TCL1AP56279 114 aa12.29□□□□□ -0.44
UPK3A-202ENST00000396082 RNF212Q495C1 297 aa12.29□□□□□ -0.44
UPK3A-202ENST00000396082 MUC21Q5SSG8 566 aa12.29□□□□□ -0.44
UPK3A-202ENST00000396082 AKR1C8PQ5T2L2 129 aa12.29□□□□□ -0.44
UPK3A-202ENST00000396082 IBA57Q5T440 356 aaKnown RBP12.29□□□□□ -0.44
UPK3A-202ENST00000396082 Q6ZQT7 251 aa12.29□□□□□ -0.44
UPK3A-202ENST00000396082 ARL6IP6Q8N6S5 226 aa12.29□□□□□ -0.44
UPK3A-202ENST00000396082 ST6GAL2Q96JF0 529 aa12.29□□□□□ -0.44
UPK3A-202ENST00000396082 TP53TG3Q9ULZ0 132 aa12.29□□□□□ -0.44
UPK3A-202ENST00000396082 M0R2N4 97 aa12.28□□□□□ -0.44
UPK3A-202ENST00000396082 ZNF415Q09FC8 603 aa12.28□□□□□ -0.44
UPK3A-202ENST00000396082 C5orf17Q8NAS9 161 aa12.28□□□□□ -0.44
UPK3A-202ENST00000396082 TMPRSS5Q9H3S3 457 aa12.28□□□□□ -0.44
UPK3A-202ENST00000396082 NAGKQ9UJ70 344 aa12.28□□□□□ -0.44
UPK3A-202ENST00000396082 KLF12Q9Y4X4 402 aa12.28□□□□□ -0.44
UPK3A-202ENST00000396082 IGLV2-18A0A075B6J9 118 aa12.27□□□□□ -0.45
UPK3A-202ENST00000396082 TRAV26-1A0A087WT03 109 aa12.27□□□□□ -0.45
UPK3A-202ENST00000396082 TRAV8-1A0A0A6YYK1 113 aa12.27□□□□□ -0.45
UPK3A-202ENST00000396082 CTXND1A0A1B0GTU2 59 aa12.27□□□□□ -0.45
UPK3A-202ENST00000396082 SERTM2A0A1B0GWG4 89 aa12.27□□□□□ -0.45
UPK3A-202ENST00000396082 K7EQM0 130 aa12.27□□□□□ -0.45
UPK3A-202ENST00000396082 Q6AWC8 147 aa12.27□□□□□ -0.45
UPK3A-202ENST00000396082 FAM159AQ6UWV7 190 aa12.27□□□□□ -0.45
UPK3A-202ENST00000396082 NDFIP1Q9BT67 221 aa12.27□□□□□ -0.45
UPK3A-202ENST00000396082 TREM1Q9NP99 234 aa12.27□□□□□ -0.45
UPK3A-202ENST00000396082 EPPK1P58107 5090 aaKnown RBP12.26□□□□□ -0.45
UPK3A-202ENST00000396082 A0A0J9YY99 117 aa12.26□□□□□ -0.45
UPK3A-202ENST00000396082 SSX7Q7RTT5 188 aa12.26□□□□□ -0.45
UPK3A-202ENST00000396082 SGK494Q96LW2 274 aa12.26□□□□□ -0.45
UPK3A-202ENST00000396082 DNAH6Q9C0G6 4158 aa12.25□□□□□ -0.45
UPK3A-202ENST00000396082 TRGV11A0A075B6L2 103 aa12.25□□□□□ -0.45
UPK3A-202ENST00000396082 F6UZH7 168 aa12.25□□□□□ -0.45
UPK3A-202ENST00000396082 SPINK4O60575 86 aa12.25□□□□□ -0.45
UPK3A-202ENST00000396082 TCRAP04437 139 aa12.25□□□□□ -0.45
UPK3A-202ENST00000396082 HOXA5P20719 270 aa12.25□□□□□ -0.45
UPK3A-202ENST00000396082 CCL18P55774 89 aa12.25□□□□□ -0.45
UPK3A-202ENST00000396082 SUMO1P63165 101 aaKnown RBP12.25□□□□□ -0.45
UPK3A-202ENST00000396082 SUN5Q8TC36 379 aa12.25□□□□□ -0.45
UPK3A-202ENST00000396082 MRPL16Q9NX20 251 aaKnown RBP12.25□□□□□ -0.45
UPK3A-202ENST00000396082 TRAV21A0A0B4J279 112 aa12.24□□□□□ -0.45
UPK3A-202ENST00000396082 NACAE9PAV3 2078 aa12.24□□□□□ -0.45
UPK3A-202ENST00000396082 FAM3BP58499 235 aaPredicted RBP12.24□□□□□ -0.45
UPK3A-202ENST00000396082 ZNF726P1Q15940 193 aa12.24□□□□□ -0.45
UPK3A-202ENST00000396082 TMEM183BQ1AE95 376 aa12.24□□□□□ -0.45
UPK3A-202ENST00000396082 TMEM183AQ8IXX5 376 aa12.24□□□□□ -0.45
UPK3A-202ENST00000396082 CYTL1Q9NRR1 136 aa12.24□□□□□ -0.45
UPK3A-202ENST00000396082 GGTLC3B5MD39 225 aa12.23□□□□□ -0.45
UPK3A-202ENST00000396082 FGF8P55075 233 aaPredicted RBP12.23□□□□□ -0.45
UPK3A-202ENST00000396082 ZNF345Q14585 488 aa12.23□□□□□ -0.45
UPK3A-202ENST00000396082 LGALS9BQ3B8N2 356 aa12.23□□□□□ -0.45
UPK3A-202ENST00000396082 CYB561D1Q8N8Q1 229 aa12.23□□□□□ -0.45
UPK3A-202ENST00000396082 C18orf15Q96N68 181 aa12.23□□□□□ -0.45
UPK3A-202ENST00000396082 EPDR1Q9UM22 224 aa12.23□□□□□ -0.45
UPK3A-202ENST00000396082 A0A1W2PRE2 83 aa12.22□□□□□ -0.45
UPK3A-202ENST00000396082 IFNA7P01567 189 aa12.22□□□□□ -0.45
UPK3A-202ENST00000396082 IGHV3-53P01767 116 aa12.22□□□□□ -0.45
UPK3A-202ENST00000396082 UBE2G2P60604 165 aa12.22□□□□□ -0.45
UPK3A-202ENST00000396082 KCNRGQ8N5I3 272 aa12.22□□□□□ -0.45
UPK3A-202ENST00000396082 TVP23CQ96ET8 276 aa12.22□□□□□ -0.45
UPK3A-202ENST00000396082 MDFICQ9P1T7 246 aa12.22□□□□□ -0.45
UPK3A-202ENST00000396082 PSG8Q9UQ74 426 aa12.22□□□□□ -0.45
UPK3A-202ENST00000396082 KANTRA0A1W2PQU2 76 aa12.21□□□□□ -0.45
UPK3A-202ENST00000396082 MAP1LC3B2A6NCE7 125 aa12.21□□□□□ -0.45
UPK3A-202ENST00000396082 HMSDA8MTL9 139 aa12.21□□□□□ -0.45
UPK3A-202ENST00000396082 FLI1Q01543 452 aaPredicted RBP12.21□□□□□ -0.45
UPK3A-202ENST00000396082 ZFP69Q49AA0 526 aa12.21□□□□□ -0.45
UPK3A-202ENST00000396082 PRNTQ86SH4 94 aa12.21□□□□□ -0.45
UPK3A-202ENST00000396082 MAP1LC3BQ9GZQ8 125 aa12.21□□□□□ -0.45
UPK3A-202ENST00000396082 A0A0D9SG52 128 aa12.2□□□□□ -0.46
UPK3A-202ENST00000396082 FBLL1A6NHQ2 334 aaKnown RBP12.2□□□□□ -0.46
UPK3A-202ENST00000396082 H3BNG1 76 aa12.2□□□□□ -0.46
UPK3A-202ENST00000396082 TMEM75Q8N9X5 138 aa12.2□□□□□ -0.46
UPK3A-202ENST00000396082 STOML3Q8TAV4 291 aa12.2□□□□□ -0.46
UPK3A-202ENST00000396082 KCNS1Q96KK3 526 aa12.2□□□□□ -0.46
UPK3A-202ENST00000396082 SPXQ9BT56 116 aa12.2□□□□□ -0.46
UPK3A-202ENST00000396082 ZNF471Q9BX82 626 aaPredicted RBP12.2□□□□□ -0.46
UPK3A-202ENST00000396082 SDF2L1Q9HCN8 221 aa12.2□□□□□ -0.46
UPK3A-202ENST00000396082 TDRG1Q3Y452 100 aa12.19□□□□□ -0.46
UPK3A-202ENST00000396082 LINC00336Q6ZUF6 198 aa12.19□□□□□ -0.46
UPK3A-202ENST00000396082 OR11H4Q8NGC9 324 aa12.19□□□□□ -0.46
UPK3A-202ENST00000396082 C8orf49Q96NF6 230 aa12.19□□□□□ -0.46
UPK3A-202ENST00000396082 LINC00588Q9Y4M8 146 aa12.19□□□□□ -0.46
UPK3A-202ENST00000396082 MUC4Q99102 2169 aa12.19□□□□□ -0.46
UPK3A-202ENST00000396082 BCL2L11O43521 198 aa12.18□□□□□ -0.46
UPK3A-202ENST00000396082 GNRH2O43555 120 aa12.18□□□□□ -0.46
UPK3A-202ENST00000396082 PFDN1O60925 122 aa12.18□□□□□ -0.46
UPK3A-202ENST00000396082 GCGP01275 180 aa12.18□□□□□ -0.46
UPK3A-202ENST00000396082 TYMSP04818 313 aa12.18□□□□□ -0.46
UPK3A-202ENST00000396082 PPT1P50897 306 aa12.18□□□□□ -0.46
UPK3A-202ENST00000396082 SMUG1Q53HV7 270 aa12.18□□□□□ -0.46
UPK3A-202ENST00000396082 SOHLH1Q5JUK2 328 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms