RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 AKAP6Q13023 2319 aa4.17□□□□□ -1.74
VPS41-203ENST00000395969 TRAV25A0A0B4J276 109 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 IGHV1-69DA0A0B4J2H0 117 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 CENPVL3A0A0U1RRI6 287 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 A6NDX4 124 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 FAM223BA6NKX1 122 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 E9PLD3 99 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 LTAP01374 205 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 IGHV1-69P01742 117 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 CT45A10P0DMU9 189 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 GP9P14770 177 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 SEC61GP60059 68 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 DIAPH2-AS1Q14236 149 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 KRTAP1-3Q8IUG1 177 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 FAM223AQ8IWN6 122 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 NPIPB3Q92617 1050 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 RPEQ96AT9 228 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 FXYD5Q96DB9 178 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 PGLYRP4Q96LB8 373 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 A0A1B0GWB2 263 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 H3BRN7 92 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 NPFFO15130 113 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 FAM106CPP0CH98 169 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 C5orf56Q8N8D9 126 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 SYT8Q8NBV8 401 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 ZNF418Q8TF45 676 aaPredicted RBP4.16□□□□□ -1.74
VPS41-203ENST00000395969 RITA1Q96K30 269 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 NHP2Q9NX24 153 aaKnown RBP4.16□□□□□ -1.74
VPS41-203ENST00000395969 PRO0461Q9UI25 63 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 EPDR1Q9UM22 224 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 LOC400499M0QZD8 3231 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 LOC389332A0A1B0GUA5 103 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 RBAKDNA6NC62 111 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 TIMM23O14925 209 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 P01737 135 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 PYYP10082 97 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 FXYD2P54710 66 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 PATE2Q6UY27 113 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 ZNF502Q8TBZ5 544 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 SRSF12Q8WXF0 261 aaKnown RBP4.16□□□□□ -1.74
VPS41-203ENST00000395969 LEAP2Q969E1 77 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 PAXXQ9BUH6 204 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 PTPRQQ9UMZ3 2332 aa4.16□□□□□ -1.74
VPS41-203ENST00000395969 IGHV7-81A0A0B4J1V7 117 aa4.15□□□□□ -1.74
VPS41-203ENST00000395969 GNG5P63218 68 aa4.15□□□□□ -1.74
VPS41-203ENST00000395969 C8orf86Q6ZUL3 223 aa4.15□□□□□ -1.74
VPS41-203ENST00000395969 PCP2Q8IVA1 136 aa4.15□□□□□ -1.74
VPS41-203ENST00000395969 FMC1Q96HJ9 113 aa4.15□□□□□ -1.74
VPS41-203ENST00000395969 SHANK2-AS3Q9BTD1 123 aa4.15□□□□□ -1.74
VPS41-203ENST00000395969 TM2D2Q9BX73 214 aa4.15□□□□□ -1.74
VPS41-203ENST00000395969 SPTBN2O15020 2390 aa4.15□□□□□ -1.75
VPS41-203ENST00000395969 TRBV7-1A0A0A6YYK4 115 aa4.15□□□□□ -1.75
VPS41-203ENST00000395969 IGLV1-40P01703 118 aa4.15□□□□□ -1.75
VPS41-203ENST00000395969 IGHG2P01859 326 aa4.15□□□□□ -1.75
VPS41-203ENST00000395969 IGKV1-17P01599 117 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 MYOD1P15172 320 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 RPL32P62910 135 aaKnown RBP4.14□□□□□ -1.75
VPS41-203ENST00000395969 FAM106AQ4KMX7 169 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 PSMG4Q5JS54 123 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 BCL6BQ8N143 479 aaPredicted RBP4.14□□□□□ -1.75
VPS41-203ENST00000395969 PTH2Q96A98 100 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 CCL19Q99731 98 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 FAM110AQ9BQ89 295 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 U3KQK5 164 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 TTC28Q96AY4 2481 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 PRRC2AP48634 2157 aaKnown RBP4.14□□□□□ -1.75
VPS41-203ENST00000395969 B4DSR2 109 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 IGLL5B9A064 214 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 SLC25A5P05141 298 aaKnown RBP4.14□□□□□ -1.75
VPS41-203ENST00000395969 HLA-DRB4P13762 266 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 CACNG7P62955 275 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 MLANAQ16655 118 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 ZNF493Q6ZR52 646 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 DYNAPQ8N1N2 210 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 TMEM75Q8N9X5 138 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 OTORQ9NRC9 128 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 TPSG1Q9NRR2 321 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 ERG28Q9UKR5 140 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 MOB4Q9Y3A3 225 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 HLA-DRB4X5D2U9 266 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 MSMBP08118 114 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 IFI27P40305 119 aaPredicted RBP4.14□□□□□ -1.75
VPS41-203ENST00000395969 KLRD1Q13241 179 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 C10orf113Q5VZT2 155 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 APRG1Q8IVJ8 170 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 CEND1Q8N111 149 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 LINC01356Q8N9X3 169 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 ATP6V0E2Q8NHE4 81 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 USMG5Q96IX5 58 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 C1QTNF4Q9BXJ3 329 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 ZNRD1Q9P1U0 126 aa4.14□□□□□ -1.75
VPS41-203ENST00000395969 SPTA1P02549 2419 aa4.13□□□□□ -1.75
VPS41-203ENST00000395969 A0A1B0GUT8 65 aa4.13□□□□□ -1.75
VPS41-203ENST00000395969 H3BTX0 84 aa4.13□□□□□ -1.75
VPS41-203ENST00000395969 SRSF9Q13242 221 aaKnown RBP eCLIP4.13□□□□□ -1.75
VPS41-203ENST00000395969 PRSS3P2Q8NHM4 247 aa4.13□□□□□ -1.75
VPS41-203ENST00000395969 CHAC1Q9BUX1 264 aa4.13□□□□□ -1.75
VPS41-203ENST00000395969 BPESC1Q9GZL8 116 aa4.13□□□□□ -1.75
VPS41-203ENST00000395969 CYSLTR1Q9Y271 337 aa4.13□□□□□ -1.75
VPS41-203ENST00000395969 M0QXV9 152 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms