RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 CXorf65A6NEN9 183 aa15.14■□□□□ 0.01
VCPKMT-202ENST00000395860 J3KRW8 73 aa15.14■□□□□ 0.01
VCPKMT-202ENST00000395860 ODF3Q96PU9 254 aa15.14■□□□□ 0.01
VCPKMT-202ENST00000395860 SH2D1AO60880 128 aa15.13■□□□□ 0.01
VCPKMT-202ENST00000395860 CD7P09564 240 aa15.13■□□□□ 0.01
VCPKMT-202ENST00000395860 LURAP1LQ8IV03 231 aa15.13■□□□□ 0.01
VCPKMT-202ENST00000395860 ZFAND2AQ8N6M9 145 aa15.13■□□□□ 0.01
VCPKMT-202ENST00000395860 TUBA4BQ9H853 241 aa15.13■□□□□ 0.01
VCPKMT-202ENST00000395860 FABP5P3A8MUU1 101 aa15.13■□□□□ 0.01
VCPKMT-202ENST00000395860 H3BMM0 161 aa15.13■□□□□ 0.01
VCPKMT-202ENST00000395860 GPX1P07203 203 aa15.13■□□□□ 0.01
VCPKMT-202ENST00000395860 CRISP2P16562 243 aa15.13■□□□□ 0.01
VCPKMT-202ENST00000395860 FAM110AQ9BQ89 295 aa15.13■□□□□ 0.01
VCPKMT-202ENST00000395860 RPP21Q9H633 154 aaKnown RBP15.13■□□□□ 0.01
VCPKMT-202ENST00000395860 URGCP-MRPS24S4R325 110 aa15.13■□□□□ 0.01
VCPKMT-202ENST00000395860 PFN1P07737 140 aaKnown RBP15.12■□□□□ 0.01
VCPKMT-202ENST00000395860 LEPP41159 167 aa15.12■□□□□ 0.01
VCPKMT-202ENST00000395860 S100PP25815 95 aa15.11■□□□□ 0.01
VCPKMT-202ENST00000395860 PRR9Q5T870 116 aa15.11■□□□□ 0.01
VCPKMT-202ENST00000395860 IL36BQ9NZH7 164 aa15.11■□□□□ 0.01
VCPKMT-202ENST00000395860 CA1P00915 261 aaPredicted RBP15.11■□□□□ 0.01
VCPKMT-202ENST00000395860 KCNIP4Q6PIL6 250 aa15.11■□□□□ 0.01
VCPKMT-202ENST00000395860 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.11■□□□□ 0.01
VCPKMT-202ENST00000395860 MDFIQ99750 246 aa15.11■□□□□ 0.01
VCPKMT-202ENST00000395860 TSPOP30536 169 aa15.1■□□□□ 0.01
VCPKMT-202ENST00000395860 RNASE4P34096 147 aaKnown RBP15.1■□□□□ 0.01
VCPKMT-202ENST00000395860 AMTNQ6UX39 209 aa15.1■□□□□ 0.01
VCPKMT-202ENST00000395860 GTSCR1Q86UQ5 136 aa15.1■□□□□ 0.01
VCPKMT-202ENST00000395860 STHQ8IWL8 128 aa15.1■□□□□ 0.01
VCPKMT-202ENST00000395860 OR2D3Q8NGH3 330 aa15.1■□□□□ 0.01
VCPKMT-202ENST00000395860 IMMP2LQ96T52 175 aa15.1■□□□□ 0.01
VCPKMT-202ENST00000395860 VWFP04275 2813 aa15.1■□□□□ 0.01
VCPKMT-202ENST00000395860 A8MTW9 85 aa15.09■□□□□ 0.01
VCPKMT-202ENST00000395860 KLLNB2CW77 178 aa15.09■□□□□ 0.01
VCPKMT-202ENST00000395860 WIPF1O43516 503 aa15.09■□□□□ 0.01
VCPKMT-202ENST00000395860 CDKN1BP46527 198 aa15.09■□□□□ 0.01
VCPKMT-202ENST00000395860 KIR3DS1Q14943 382 aa15.09■□□□□ 0.01
VCPKMT-202ENST00000395860 SPINK13Q1W4C9 94 aa15.09■□□□□ 0.01
VCPKMT-202ENST00000395860 C19orf73Q9NVV2 129 aa15.09■□□□□ 0.01
VCPKMT-202ENST00000395860 M0R2Z0 102 aa15.08■□□□□ 0.01
VCPKMT-202ENST00000395860 RPL19P84098 196 aaKnown RBP15.08■□□□□ 0.01
VCPKMT-202ENST00000395860 ELOBQ15370 118 aa15.08■□□□□ 0.01
VCPKMT-202ENST00000395860 CT83Q5H943 113 aa15.08■□□□□ 0.01
VCPKMT-202ENST00000395860 TMEM189A5PLL7 270 aa15.08■□□□□ 0
VCPKMT-202ENST00000395860 A8MWL6 223 aa15.08■□□□□ 0
VCPKMT-202ENST00000395860 ORM1P02763 201 aa15.08■□□□□ 0
VCPKMT-202ENST00000395860 FAM3BP58499 235 aaPredicted RBP15.08■□□□□ 0
VCPKMT-202ENST00000395860 PRR31Q5SQ13 230 aa15.08■□□□□ 0
VCPKMT-202ENST00000395860 WFDC10AQ9H1F0 79 aa15.08■□□□□ 0
VCPKMT-202ENST00000395860 STAB1Q9NY15 2570 aa15.07■□□□□ 0
VCPKMT-202ENST00000395860 TRAV21A0A0B4J279 112 aa15.07■□□□□ 0
VCPKMT-202ENST00000395860 RBMY1BA6NDE4 496 aaKnown RBP15.07■□□□□ 0
VCPKMT-202ENST00000395860 RBMY1EA6NEQ0 496 aaKnown RBP15.07■□□□□ 0
VCPKMT-202ENST00000395860 RBMY1DP0C7P1 496 aaKnown RBP15.07■□□□□ 0
VCPKMT-202ENST00000395860 TSKUQ8WUA8 353 aa15.07■□□□□ 0
VCPKMT-202ENST00000395860 A0A1W2PPQ1 181 aa15.06■□□□□ 0
VCPKMT-202ENST00000395860 SMIM27A0A1W2PRY6 76 aa15.06■□□□□ 0
VCPKMT-202ENST00000395860 TCL1AP56279 114 aa15.06■□□□□ 0
VCPKMT-202ENST00000395860 FXYD7P58549 80 aa15.06■□□□□ 0
VCPKMT-202ENST00000395860 Q6AWC8 147 aa15.06■□□□□ 0
VCPKMT-202ENST00000395860 YPEL4Q96NS1 127 aa15.06■□□□□ 0
VCPKMT-202ENST00000395860 CLUHP3Q96NS8 147 aa15.06■□□□□ 0
VCPKMT-202ENST00000395860 TRAV12-2A0A075B6T6 113 aa15.06■□□□□ 0
VCPKMT-202ENST00000395860 TMSB15BA0A087X1C1 80 aa15.06■□□□□ 0
VCPKMT-202ENST00000395860 C7orf71A4D174 169 aa15.06■□□□□ 0
VCPKMT-202ENST00000395860 Q6ZQT7 251 aa15.06■□□□□ 0
VCPKMT-202ENST00000395860 TRPT1Q86TN4 253 aaKnown RBP15.06■□□□□ 0
VCPKMT-202ENST00000395860 TGIF2-C20orf24A0A0A6YYL0 155 aa15.05■□□□□ -0
VCPKMT-202ENST00000395860 XKRY2A2RUG3 117 aa15.05■□□□□ -0
VCPKMT-202ENST00000395860 LINC01559Q495D7 138 aa15.05■□□□□ -0
VCPKMT-202ENST00000395860 COL6A5A8TX70 2615 aa15.05■□□□□ -0
VCPKMT-202ENST00000395860 TRAV12-3A0A0B4J271 114 aa15.04■□□□□ -0
VCPKMT-202ENST00000395860 COLCA2A8K830 154 aa15.04■□□□□ -0
VCPKMT-202ENST00000395860 GZMBP10144 247 aa15.04■□□□□ -0
VCPKMT-202ENST00000395860 OXLD1Q5BKU9 147 aa15.04■□□□□ -0
VCPKMT-202ENST00000395860 GFI1BQ5VTD9 330 aa15.04■□□□□ -0
VCPKMT-202ENST00000395860 NEU1Q99519 415 aa15.04■□□□□ -0
VCPKMT-202ENST00000395860 C11orf21Q9P2W6 132 aa15.04■□□□□ -0
VCPKMT-202ENST00000395860 CXCL1P09341 107 aa15.03■□□□□ -0
VCPKMT-202ENST00000395860 RPS20P60866 119 aaKnown RBP15.03■□□□□ -0
VCPKMT-202ENST00000395860 GFRA4Q9GZZ7 299 aa15.03■□□□□ -0
VCPKMT-202ENST00000395860 NAT8BQ9UHF3 227 aa15.03■□□□□ -0
VCPKMT-202ENST00000395860 NAGKQ9UJ70 344 aa15.03■□□□□ -0
VCPKMT-202ENST00000395860 DEFB125Q8N687 156 aa15.03■□□□□ -0
VCPKMT-202ENST00000395860 IGKV3D-20A0A0C4DH25 116 aa15.02□□□□□ -0.01
VCPKMT-202ENST00000395860 HIGD1CA8MV81 97 aa15.02□□□□□ -0.01
VCPKMT-202ENST00000395860 GTSF1Q8WW33 167 aa15.02□□□□□ -0.01
VCPKMT-202ENST00000395860 TRBV24-1A0A075B6N3 115 aa15.01□□□□□ -0.01
VCPKMT-202ENST00000395860 TRAV9-1A0A075B6T8 112 aa15.01□□□□□ -0.01
VCPKMT-202ENST00000395860 FAM231BA6NCW3 169 aa15.01□□□□□ -0.01
VCPKMT-202ENST00000395860 NUTF2P61970 127 aaKnown RBP15.01□□□□□ -0.01
VCPKMT-202ENST00000395860 CRXO43186 299 aaPredicted RBP15.01□□□□□ -0.01
VCPKMT-202ENST00000395860 ZNF324O75467 553 aaPredicted RBP15.01□□□□□ -0.01
VCPKMT-202ENST00000395860 MUC21Q5SSG8 566 aa15.01□□□□□ -0.01
VCPKMT-202ENST00000395860 NUP35Q8NFH5 326 aa15.01□□□□□ -0.01
VCPKMT-202ENST00000395860 BTF3L4Q96K17 158 aa15.01□□□□□ -0.01
VCPKMT-202ENST00000395860 PYGO2Q9BRQ0 406 aa15.01□□□□□ -0.01
VCPKMT-202ENST00000395860 TRRAPQ9Y4A5 3859 aa15□□□□□ -0.01
VCPKMT-202ENST00000395860 GRIFINA4D1Z8 144 aa15□□□□□ -0.01
VCPKMT-202ENST00000395860 FAM210BQ96KR6 192 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms