RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 KIR3DS1Q14943 382 aa12.26□□□□□ -0.45
SMARCD1-202ENST00000394963 MAJINQ3KP22 176 aa12.26□□□□□ -0.45
SMARCD1-202ENST00000394963 LINC00477Q96M19 166 aa12.26□□□□□ -0.45
SMARCD1-202ENST00000394963 VWC2LB2RUY7 222 aa12.25□□□□□ -0.45
SMARCD1-202ENST00000394963 F8W735 103 aaPredicted RBP12.25□□□□□ -0.45
SMARCD1-202ENST00000394963 Q8N6K4 173 aa12.25□□□□□ -0.45
SMARCD1-202ENST00000394963 TMEM14CQ9P0S9 112 aa12.25□□□□□ -0.45
SMARCD1-202ENST00000394963 J3QKU1 62 aa12.25□□□□□ -0.45
SMARCD1-202ENST00000394963 DSCR9P59020 149 aa12.25□□□□□ -0.45
SMARCD1-202ENST00000394963 PLP1P60201 277 aa12.25□□□□□ -0.45
SMARCD1-202ENST00000394963 C3orf79P0CE67 100 aa12.25□□□□□ -0.45
SMARCD1-202ENST00000394963 GATA1P15976 413 aaPredicted RBP12.25□□□□□ -0.45
SMARCD1-202ENST00000394963 ERASQ7Z444 233 aa12.25□□□□□ -0.45
SMARCD1-202ENST00000394963 LINC00614P0C842 121 aa12.24□□□□□ -0.45
SMARCD1-202ENST00000394963 EBLN2Q6P2I7 272 aa12.24□□□□□ -0.45
SMARCD1-202ENST00000394963 KLHL30-AS1Q8NEE0 82 aa12.24□□□□□ -0.45
SMARCD1-202ENST00000394963 CD7P09564 240 aa12.24□□□□□ -0.45
SMARCD1-202ENST00000394963 IFI27P40305 119 aaPredicted RBP12.24□□□□□ -0.45
SMARCD1-202ENST00000394963 SLC50A1Q9BRV3 221 aa12.24□□□□□ -0.45
SMARCD1-202ENST00000394963 SMAD5-AS1Q9Y6J3 95 aa12.24□□□□□ -0.45
SMARCD1-202ENST00000394963 HNRNPA3P51991 378 aaKnown RBP12.24□□□□□ -0.45
SMARCD1-202ENST00000394963 DAZ1Q9NQZ3 744 aaKnown RBP12.24□□□□□ -0.45
SMARCD1-202ENST00000394963 LINC00173Q6ZV60 143 aa12.23□□□□□ -0.45
SMARCD1-202ENST00000394963 ID1P41134 155 aa12.23□□□□□ -0.45
SMARCD1-202ENST00000394963 FAM159AQ6UWV7 190 aa12.23□□□□□ -0.45
SMARCD1-202ENST00000394963 KLF2Q9Y5W3 355 aaPredicted RBP12.23□□□□□ -0.45
SMARCD1-202ENST00000394963 IGHV3-73A0A0B4J1V6 119 aa12.23□□□□□ -0.45
SMARCD1-202ENST00000394963 SPOCK3Q9BQ16 436 aa12.23□□□□□ -0.45
SMARCD1-202ENST00000394963 MAP1LC3CQ9BXW4 147 aa12.23□□□□□ -0.45
SMARCD1-202ENST00000394963 CRIP1P50238 77 aa12.22□□□□□ -0.45
SMARCD1-202ENST00000394963 SPINK13Q1W4C9 94 aa12.22□□□□□ -0.45
SMARCD1-202ENST00000394963 NSUN5P1Q3KNT7 163 aa12.22□□□□□ -0.45
SMARCD1-202ENST00000394963 PRSS57Q6UWY2 283 aa12.22□□□□□ -0.45
SMARCD1-202ENST00000394963 PIFOQ8TCI5 191 aa12.22□□□□□ -0.45
SMARCD1-202ENST00000394963 A0A1B0GV90 55 aa12.22□□□□□ -0.45
SMARCD1-202ENST00000394963 FSTL3O95633 263 aa12.22□□□□□ -0.45
SMARCD1-202ENST00000394963 SLURP1P55000 103 aa12.22□□□□□ -0.45
SMARCD1-202ENST00000394963 CTAG1AP78358 180 aa12.22□□□□□ -0.45
SMARCD1-202ENST00000394963 EBI3Q14213 229 aa12.22□□□□□ -0.45
SMARCD1-202ENST00000394963 C14orf178Q8N769 122 aaPredicted RBP12.22□□□□□ -0.45
SMARCD1-202ENST00000394963 OR10AG1Q8NH19 301 aa12.22□□□□□ -0.45
SMARCD1-202ENST00000394963 HINT1P49773 126 aaPredicted RBP12.22□□□□□ -0.45
SMARCD1-202ENST00000394963 PDE6HQ13956 83 aa12.22□□□□□ -0.45
SMARCD1-202ENST00000394963 ALKBH7Q9BT30 221 aaPredicted RBP12.22□□□□□ -0.45
SMARCD1-202ENST00000394963 TRAV9-1A0A075B6T8 112 aa12.21□□□□□ -0.45
SMARCD1-202ENST00000394963 FAM223BA6NKX1 122 aa12.21□□□□□ -0.45
SMARCD1-202ENST00000394963 FOSL1P15407 271 aa12.21□□□□□ -0.45
SMARCD1-202ENST00000394963 FCER1GP30273 86 aa12.21□□□□□ -0.45
SMARCD1-202ENST00000394963 FAM223AQ8IWN6 122 aa12.21□□□□□ -0.45
SMARCD1-202ENST00000394963 LYPD1Q8N2G4 141 aa12.21□□□□□ -0.45
SMARCD1-202ENST00000394963 OR11H1Q8NG94 326 aa12.21□□□□□ -0.45
SMARCD1-202ENST00000394963 KLK9Q9UKQ9 250 aa12.21□□□□□ -0.45
SMARCD1-202ENST00000394963 A8MWP6 167 aa12.21□□□□□ -0.46
SMARCD1-202ENST00000394963 SNRPD3P62318 126 aaKnown RBP12.21□□□□□ -0.46
SMARCD1-202ENST00000394963 C18orf65Q6ZTR6 163 aa12.21□□□□□ -0.46
SMARCD1-202ENST00000394963 ORMDL3Q8N138 153 aa12.21□□□□□ -0.46
SMARCD1-202ENST00000394963 KLHDC1Q8N7A1 406 aa12.21□□□□□ -0.46
SMARCD1-202ENST00000394963 A0A087WWL8 130 aa12.2□□□□□ -0.46
SMARCD1-202ENST00000394963 LOC102724200A0A096LPH7 203 aaPredicted RBP12.2□□□□□ -0.46
SMARCD1-202ENST00000394963 hDV102S1A0JD36 115 aa12.2□□□□□ -0.46
SMARCD1-202ENST00000394963 GNRH2O43555 120 aa12.2□□□□□ -0.46
SMARCD1-202ENST00000394963 FAM231DQ6ZW35 169 aa12.2□□□□□ -0.46
SMARCD1-202ENST00000394963 USMG5Q96IX5 58 aa12.2□□□□□ -0.46
SMARCD1-202ENST00000394963 SMR3AQ99954 134 aa12.2□□□□□ -0.46
SMARCD1-202ENST00000394963 A6NDX4 124 aa12.19□□□□□ -0.46
SMARCD1-202ENST00000394963 IGHG2P01859 326 aa12.19□□□□□ -0.46
SMARCD1-202ENST00000394963 NMUP48645 174 aa12.19□□□□□ -0.46
SMARCD1-202ENST00000394963 PRDM13Q9H4Q3 707 aa12.19□□□□□ -0.46
SMARCD1-202ENST00000394963 TP53TG3Q9ULZ0 132 aa12.19□□□□□ -0.46
SMARCD1-202ENST00000394963 OR4C46A6NHA9 309 aa12.19□□□□□ -0.46
SMARCD1-202ENST00000394963 MYCNOSP40205 109 aa12.19□□□□□ -0.46
SMARCD1-202ENST00000394963 POLR3KQ9Y2Y1 108 aaPredicted RBP12.19□□□□□ -0.46
SMARCD1-202ENST00000394963 KLF12Q9Y4X4 402 aa12.19□□□□□ -0.46
SMARCD1-202ENST00000394963 IGLV2-11P01706 119 aa12.18□□□□□ -0.46
SMARCD1-202ENST00000394963 TMEM70Q9BUB7 260 aa12.18□□□□□ -0.46
SMARCD1-202ENST00000394963 MLST8Q9BVC4 326 aa12.18□□□□□ -0.46
SMARCD1-202ENST00000394963 MXRA5Q9NR99 2828 aa12.18□□□□□ -0.46
SMARCD1-202ENST00000394963 UBR5O95071 2799 aaPredicted RBP12.18□□□□□ -0.46
SMARCD1-202ENST00000394963 NEGR1Q7Z3B1 354 aa12.18□□□□□ -0.46
SMARCD1-202ENST00000394963 VPREB3Q9UKI3 123 aa12.18□□□□□ -0.46
SMARCD1-202ENST00000394963 ZFAND3Q9H8U3 227 aa12.18□□□□□ -0.46
SMARCD1-202ENST00000394963 KNCNA6PVL3 124 aa12.17□□□□□ -0.46
SMARCD1-202ENST00000394963 TCAPO15273 167 aa12.17□□□□□ -0.46
SMARCD1-202ENST00000394963 IGHV4-31P0DP07 118 aa12.17□□□□□ -0.46
SMARCD1-202ENST00000394963 DEFB131AP59861 70 aa12.17□□□□□ -0.46
SMARCD1-202ENST00000394963 SRSF1Q07955 248 aaKnown RBP eCLIP12.17□□□□□ -0.467e-6■□□□□ 10.7
SMARCD1-202ENST00000394963 TCTEX1D4Q5JR98 221 aa12.17□□□□□ -0.46
SMARCD1-202ENST00000394963 TP73-AS1Q9UF72 201 aa12.17□□□□□ -0.46
SMARCD1-202ENST00000394963 RNF114Q9Y508 228 aa12.17□□□□□ -0.46
SMARCD1-202ENST00000394963 IGHV4OR15-8A0A075B7B6 117 aa12.17□□□□□ -0.46
SMARCD1-202ENST00000394963 A0A087WW49 117 aa12.17□□□□□ -0.46
SMARCD1-202ENST00000394963 HOXD3P31249 432 aaPredicted RBP12.17□□□□□ -0.46
SMARCD1-202ENST00000394963 SCGB2A2Q13296 93 aa12.17□□□□□ -0.46
SMARCD1-202ENST00000394963 OR10J3Q5JRS4 329 aa12.17□□□□□ -0.46
SMARCD1-202ENST00000394963 ZNF256Q9Y2P7 627 aaPredicted RBP12.17□□□□□ -0.46
SMARCD1-202ENST00000394963 REC114Q7Z4M0 266 aa12.16□□□□□ -0.46
SMARCD1-202ENST00000394963 UBE2E2Q96LR5 201 aa12.16□□□□□ -0.46
SMARCD1-202ENST00000394963 MAP1LC3AQ9H492 121 aa12.16□□□□□ -0.46
SMARCD1-202ENST00000394963 NDUFA4O00483 81 aa12.16□□□□□ -0.46
SMARCD1-202ENST00000394963 GATA3P23771 443 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms