RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 PRADC1Q9BSG0 188 aa13.28□□□□□ -0.28
PTPA-207ENST00000393370 PSMG3-AS1Q96PY0 264 aa13.27□□□□□ -0.28
PTPA-207ENST00000393370 VKORC1Q9BQB6 163 aa13.27□□□□□ -0.28
PTPA-207ENST00000393370 RNF7Q9UBF6 113 aa13.27□□□□□ -0.28
PTPA-207ENST00000393370 ID1P41134 155 aa13.27□□□□□ -0.29
PTPA-207ENST00000393370 ASIPP42127 132 aa13.27□□□□□ -0.29
PTPA-207ENST00000393370 PLGLAQ15195 96 aa13.27□□□□□ -0.29
PTPA-207ENST00000393370 CACNA1HO95180 2353 aa13.27□□□□□ -0.29
PTPA-207ENST00000393370 GPR179Q6PRD1 2367 aa13.27□□□□□ -0.29
PTPA-207ENST00000393370 CRIP2P52943 208 aaPredicted RBP13.26□□□□□ -0.29
PTPA-207ENST00000393370 MED13Q9UHV7 2174 aa13.26□□□□□ -0.29
PTPA-207ENST00000393370 SLC25A20O43772 301 aa13.26□□□□□ -0.29
PTPA-207ENST00000393370 TRGV3P03979 118 aa13.26□□□□□ -0.29
PTPA-207ENST00000393370 WT1P19544 449 aaPredicted RBP13.26□□□□□ -0.29
PTPA-207ENST00000393370 COX8CQ7Z4L0 72 aa13.26□□□□□ -0.29
PTPA-207ENST00000393370 KLK15Q9H2R5 256 aa13.26□□□□□ -0.29
PTPA-207ENST00000393370 I3L2K1 104 aa13.26□□□□□ -0.29
PTPA-207ENST00000393370 SCGB2A1O75556 95 aa13.26□□□□□ -0.29
PTPA-207ENST00000393370 SCGB1C2P0DMR2 95 aa13.26□□□□□ -0.29
PTPA-207ENST00000393370 CD40P25942 277 aa13.26□□□□□ -0.29
PTPA-207ENST00000393370 ZNF491Q8N8L2 437 aa13.26□□□□□ -0.29
PTPA-207ENST00000393370 TMEM190Q8WZ59 177 aa13.26□□□□□ -0.29
PTPA-207ENST00000393370 MEIG1Q5JSS6 88 aa13.25□□□□□ -0.29
PTPA-207ENST00000393370 NRACQ8N912 160 aa13.25□□□□□ -0.29
PTPA-207ENST00000393370 KLHL30-AS1Q8NEE0 82 aa13.25□□□□□ -0.29
PTPA-207ENST00000393370 TRAV12-1A0A0B4J245 112 aa13.25□□□□□ -0.29
PTPA-207ENST00000393370 SLC25A16P16260 332 aa13.25□□□□□ -0.29
PTPA-207ENST00000393370 PPDPFQ9H3Y8 114 aa13.25□□□□□ -0.29
PTPA-207ENST00000393370 C9JAW5 83 aa13.24□□□□□ -0.29
PTPA-207ENST00000393370 RNF125Q96EQ8 232 aa13.24□□□□□ -0.29
PTPA-207ENST00000393370 VPREB3Q9UKI3 123 aa13.24□□□□□ -0.29
PTPA-207ENST00000393370 TEX22C9J3V5 150 aa13.24□□□□□ -0.29
PTPA-207ENST00000393370 FCN3O75636 299 aa13.24□□□□□ -0.29
PTPA-207ENST00000393370 YAE1D1Q9NRH1 226 aa13.24□□□□□ -0.29
PTPA-207ENST00000393370 ONECUT1Q9UBC0 465 aa13.24□□□□□ -0.29
PTPA-207ENST00000393370 CFC1BP0CG36 223 aa13.23□□□□□ -0.29
PTPA-207ENST00000393370 CFC1P0CG37 223 aa13.23□□□□□ -0.29
PTPA-207ENST00000393370 IGFL4Q6B9Z1 124 aa13.23□□□□□ -0.29
PTPA-207ENST00000393370 COX6B1P14854 86 aa13.23□□□□□ -0.29
PTPA-207ENST00000393370 Q6Q795 121 aa13.23□□□□□ -0.29
PTPA-207ENST00000393370 C3orf56Q8N813 242 aa13.23□□□□□ -0.29
PTPA-207ENST00000393370 DKK4Q9UBT3 224 aa13.23□□□□□ -0.29
PTPA-207ENST00000393370 SIT1Q9Y3P8 196 aa13.23□□□□□ -0.29
PTPA-207ENST00000393370 KALRNO60229 2985 aa13.23□□□□□ -0.29
PTPA-207ENST00000393370 TRPT1Q86TN4 253 aaKnown RBP13.22□□□□□ -0.29
PTPA-207ENST00000393370 ASPMQ8IZT6 3477 aa13.22□□□□□ -0.29
PTPA-207ENST00000393370 PDE6HQ13956 83 aa13.22□□□□□ -0.29
PTPA-207ENST00000393370 TMEM200BQ69YZ2 307 aa13.22□□□□□ -0.29
PTPA-207ENST00000393370 RASL10AQ92737 203 aa13.22□□□□□ -0.29
PTPA-207ENST00000393370 ODF3Q96PU9 254 aa13.22□□□□□ -0.29
PTPA-207ENST00000393370 SPENQ96T58 3664 aaKnown RBP13.21□□□□□ -0.29
PTPA-207ENST00000393370 C10orf126Q8N4M7 172 aa13.21□□□□□ -0.29
PTPA-207ENST00000393370 NEXN-AS1Q8NBZ9 246 aa13.21□□□□□ -0.29
PTPA-207ENST00000393370 GATA4P43694 442 aa13.21□□□□□ -0.29
PTPA-207ENST00000393370 Q8N1Y9 231 aa13.21□□□□□ -0.29
PTPA-207ENST00000393370 MDS2Q8NDY4 140 aa13.21□□□□□ -0.29
PTPA-207ENST00000393370 C1orf162Q8NEQ5 155 aaPredicted RBP13.21□□□□□ -0.29
PTPA-207ENST00000393370 S4R3C0 116 aa13.21□□□□□ -0.29
PTPA-207ENST00000393370 HLA-DMBP28068 263 aa13.2□□□□□ -0.3
PTPA-207ENST00000393370 NTN5Q8WTR8 489 aaPredicted RBP13.2□□□□□ -0.3
PTPA-207ENST00000393370 SCGB3A1Q96QR1 104 aa13.2□□□□□ -0.3
PTPA-207ENST00000393370 SIGLEC9Q9Y336 463 aa13.2□□□□□ -0.3
PTPA-207ENST00000393370 EP300Q09472 2414 aaPredicted RBP13.2□□□□□ -0.3
PTPA-207ENST00000393370 TNFAIP6P98066 277 aaPredicted RBP13.2□□□□□ -0.3
PTPA-207ENST00000393370 C15orf53Q8NAA6 179 aa13.2□□□□□ -0.3
PTPA-207ENST00000393370 ZZEF1O43149 2961 aa13.2□□□□□ -0.3
PTPA-207ENST00000393370 C3orf36Q3SXR2 165 aa13.19□□□□□ -0.3
PTPA-207ENST00000393370 K7EIM0 57 aa13.19□□□□□ -0.3
PTPA-207ENST00000393370 A0A0J9YY99 117 aa13.19□□□□□ -0.3
PTPA-207ENST00000393370 CRYGBP07316 175 aa13.19□□□□□ -0.3
PTPA-207ENST00000393370 Q6ZS46 218 aa13.19□□□□□ -0.3
PTPA-207ENST00000393370 M0QXV9 152 aa13.18□□□□□ -0.3
PTPA-207ENST00000393370 IGHV1-46P01743 117 aa13.18□□□□□ -0.3
PTPA-207ENST00000393370 SRSF2Q01130 221 aaKnown RBP13.18□□□□□ -0.3
PTPA-207ENST00000393370 PRR30Q53SZ7 412 aaPredicted RBP13.18□□□□□ -0.3
PTPA-207ENST00000393370 TMEM105Q8N8V8 129 aa13.18□□□□□ -0.3
PTPA-207ENST00000393370 C9orf106Q8NAJ2 232 aa13.18□□□□□ -0.3
PTPA-207ENST00000393370 CFHR4Q92496 578 aa13.18□□□□□ -0.3
PTPA-207ENST00000393370 MDFICQ9P1T7 246 aa13.18□□□□□ -0.3
PTPA-207ENST00000393370 TEX49A0A1B0GTD5 131 aa13.17□□□□□ -0.3
PTPA-207ENST00000393370 M0R1B8 84 aa13.17□□□□□ -0.3
PTPA-207ENST00000393370 CFIP05156 583 aa13.17□□□□□ -0.3
PTPA-207ENST00000393370 IL17RELQ6ZVW7 336 aa13.17□□□□□ -0.3
PTPA-207ENST00000393370 OR10J6PQ8NGY7 276 aa13.17□□□□□ -0.3
PTPA-207ENST00000393370 PRO1854Q9UHT4 67 aa13.17□□□□□ -0.3
PTPA-207ENST00000393370 IGHV3-30P01768 117 aa13.17□□□□□ -0.3
PTPA-207ENST00000393370 IGHG4P01861 327 aa13.17□□□□□ -0.3
PTPA-207ENST00000393370 IGHV3-30-5P0DP03 117 aa13.17□□□□□ -0.3
PTPA-207ENST00000393370 ERCC8Q13216 396 aa13.17□□□□□ -0.3
PTPA-207ENST00000393370 BAALCQ8WXS3 180 aa13.17□□□□□ -0.3
PTPA-207ENST00000393370 TMEM155Q4W5P6 130 aa13.16□□□□□ -0.3
PTPA-207ENST00000393370 ZNF672Q499Z4 452 aaPredicted RBP13.16□□□□□ -0.3
PTPA-207ENST00000393370 LINC00311Q8N616 119 aa13.16□□□□□ -0.3
PTPA-207ENST00000393370 TOMM6Q96B49 74 aa13.16□□□□□ -0.3
PTPA-207ENST00000393370 SLC25A15Q9Y619 301 aa13.16□□□□□ -0.3
PTPA-207ENST00000393370 RIF1Q5UIP0 2472 aaKnown RBP13.16□□□□□ -0.3
PTPA-207ENST00000393370 ZGRF1Q86YA3 2104 aa13.16□□□□□ -0.3
PTPA-207ENST00000393370 TRAV8-4A0A0B4J246 113 aa13.15□□□□□ -0.3
PTPA-207ENST00000393370 IGKV3D-20A0A0C4DH25 116 aa13.15□□□□□ -0.3
PTPA-207ENST00000393370 CXCL12P48061 93 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms