RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 DYNAPQ8N1N2 210 aa12.76□□□□□ -0.37
PHTF1-205ENST00000393357 H3BRN7 92 aa12.76□□□□□ -0.37
PHTF1-205ENST00000393357 CRYBA4P53673 196 aa12.76□□□□□ -0.37
PHTF1-205ENST00000393357 PRO3102Q9H379 93 aa12.76□□□□□ -0.37
PHTF1-205ENST00000393357 ZFP2Q6ZN57 461 aa12.75□□□□□ -0.37
PHTF1-205ENST00000393357 NCOR1P1Q9H4R4 102 aa12.75□□□□□ -0.37
PHTF1-205ENST00000393357 GEMIN7Q9H840 131 aaKnown RBP12.75□□□□□ -0.37
PHTF1-205ENST00000393357 CFHR4Q92496 578 aa12.75□□□□□ -0.37
PHTF1-205ENST00000393357 ZFHX3Q15911 3703 aa12.74□□□□□ -0.37
PHTF1-205ENST00000393357 LINC01549A6NIU2 74 aa12.74□□□□□ -0.37
PHTF1-205ENST00000393357 NDPQ00604 133 aa12.74□□□□□ -0.37
PHTF1-205ENST00000393357 ECSCRQ19T08 205 aa12.74□□□□□ -0.37
PHTF1-205ENST00000393357 BUB1B-PAK6H3BSN5 160 aa12.74□□□□□ -0.37
PHTF1-205ENST00000393357 MGPP08493 103 aa12.74□□□□□ -0.37
PHTF1-205ENST00000393357 SPINK8P0C7L1 97 aa12.74□□□□□ -0.37
PHTF1-205ENST00000393357 TEX36Q5VZQ5 186 aa12.74□□□□□ -0.37
PHTF1-205ENST00000393357 RNF185Q96GF1 192 aa12.74□□□□□ -0.37
PHTF1-205ENST00000393357 MT-ATP8P03928 68 aa12.73□□□□□ -0.37
PHTF1-205ENST00000393357 GATA3P23771 443 aa12.73□□□□□ -0.37
PHTF1-205ENST00000393357 LINC00527Q9UJ94 153 aa12.73□□□□□ -0.37
PHTF1-205ENST00000393357 IGF2RP11717 2491 aa12.73□□□□□ -0.37
PHTF1-205ENST00000393357 TMEM155Q4W5P6 130 aa12.73□□□□□ -0.37
PHTF1-205ENST00000393357 Q6AWC8 147 aa12.73□□□□□ -0.37
PHTF1-205ENST00000393357 OR11H12B2RN74 326 aa12.72□□□□□ -0.37
PHTF1-205ENST00000393357 C1orf122Q6ZSJ8 110 aa12.72□□□□□ -0.37
PHTF1-205ENST00000393357 OR11H1Q8NG94 326 aa12.72□□□□□ -0.37
PHTF1-205ENST00000393357 OR11H2Q8NH07 326 aa12.72□□□□□ -0.37
PHTF1-205ENST00000393357 SCGB1C2P0DMR2 95 aa12.72□□□□□ -0.37
PHTF1-205ENST00000393357 ZNF493Q6ZR52 646 aa12.72□□□□□ -0.37
PHTF1-205ENST00000393357 TMEM14CQ9P0S9 112 aa12.71□□□□□ -0.37
PHTF1-205ENST00000393357 IGHV3-64A0A075B6Q5 118 aa12.71□□□□□ -0.37
PHTF1-205ENST00000393357 PHLDA1Q8WV24 401 aaPredicted RBP12.71□□□□□ -0.37
PHTF1-205ENST00000393357 NACAE9PAV3 2078 aa12.71□□□□□ -0.37
PHTF1-205ENST00000393357 CSPG4Q6UVK1 2322 aa12.71□□□□□ -0.37
PHTF1-205ENST00000393357 A0A1B0GW15 77 aa12.71□□□□□ -0.38
PHTF1-205ENST00000393357 SIVA1O15304 175 aa12.71□□□□□ -0.38
PHTF1-205ENST00000393357 RPL11P62913 178 aaKnown RBP12.71□□□□□ -0.38
PHTF1-205ENST00000393357 RNASE6Q93091 150 aaKnown RBP12.71□□□□□ -0.38
PHTF1-205ENST00000393357 KIR2DL4Q99706 377 aa12.71□□□□□ -0.38
PHTF1-205ENST00000393357 MBD3L4A6NDZ8 208 aaPredicted RBP12.7□□□□□ -0.38
PHTF1-205ENST00000393357 MBD3L3A6NE82 208 aaPredicted RBP12.7□□□□□ -0.38
PHTF1-205ENST00000393357 MBD3L5A6NJ08 208 aaPredicted RBP12.7□□□□□ -0.38
PHTF1-205ENST00000393357 FABP5P3A8MUU1 101 aa12.7□□□□□ -0.38
PHTF1-205ENST00000393357 MBD3L2Q8NHZ7 208 aaPredicted RBP12.7□□□□□ -0.38
PHTF1-205ENST00000393357 LINC00574Q9H8X3 128 aa12.7□□□□□ -0.38
PHTF1-205ENST00000393357 C21orf62Q9NYP8 219 aa12.7□□□□□ -0.38
PHTF1-205ENST00000393357 E9PLD3 99 aa12.7□□□□□ -0.38
PHTF1-205ENST00000393357 BMI1P35226 326 aa12.7□□□□□ -0.38
PHTF1-205ENST00000393357 BEX4Q9NWD9 120 aaPredicted RBP12.7□□□□□ -0.38
PHTF1-205ENST00000393357 C11orf21Q9P2W6 132 aa12.7□□□□□ -0.38
PHTF1-205ENST00000393357 SS18L2Q9UHA2 77 aa12.7□□□□□ -0.38
PHTF1-205ENST00000393357 CUL9Q8IWT3 2517 aa12.7□□□□□ -0.38
PHTF1-205ENST00000393357 IGF1P05019 195 aa12.69□□□□□ -0.38
PHTF1-205ENST00000393357 PRTN3P24158 256 aa12.69□□□□□ -0.38
PHTF1-205ENST00000393357 HOXA3O43365 443 aaPredicted RBP12.69□□□□□ -0.38
PHTF1-205ENST00000393357 MFAP4P55083 255 aa12.69□□□□□ -0.38
PHTF1-205ENST00000393357 SCGB3A1Q96QR1 104 aa12.69□□□□□ -0.38
PHTF1-205ENST00000393357 ZNF815PA8K554 130 aa12.69□□□□□ -0.38
PHTF1-205ENST00000393357 F8W1H4 67 aa12.69□□□□□ -0.38
PHTF1-205ENST00000393357 RPL7P18124 248 aaKnown RBP12.69□□□□□ -0.38
PHTF1-205ENST00000393357 INS-IGF2F8WCM5 200 aa12.68□□□□□ -0.38
PHTF1-205ENST00000393357 LINC01560Q8TB33 94 aa12.68□□□□□ -0.38
PHTF1-205ENST00000393357 RPL39LQ96EH5 51 aaKnown RBP12.68□□□□□ -0.38
PHTF1-205ENST00000393357 RAXQ9Y2V3 346 aa12.68□□□□□ -0.38
PHTF1-205ENST00000393357 S100A4P26447 101 aaKnown RBP12.68□□□□□ -0.38
PHTF1-205ENST00000393357 PLEKHB2Q96CS7 222 aa12.68□□□□□ -0.38
PHTF1-205ENST00000393357 RAX2Q96IS3 184 aa12.68□□□□□ -0.38
PHTF1-205ENST00000393357 SLC25A16P16260 332 aa12.67□□□□□ -0.38
PHTF1-205ENST00000393357 RRN3P1Q2M238 152 aa12.67□□□□□ -0.38
PHTF1-205ENST00000393357 C14orf178Q8N769 122 aaPredicted RBP12.67□□□□□ -0.38
PHTF1-205ENST00000393357 NXT2Q9NPJ8 142 aaKnown RBP12.67□□□□□ -0.38
PHTF1-205ENST00000393357 PAX8Q06710 450 aa12.67□□□□□ -0.38
PHTF1-205ENST00000393357 LAGE3Q14657 143 aa12.67□□□□□ -0.38
PHTF1-205ENST00000393357 U3KQK5 164 aa12.67□□□□□ -0.38
PHTF1-205ENST00000393357 A0A0G2JNJ9 132 aa12.67□□□□□ -0.38
PHTF1-205ENST00000393357 NFE4Q86UQ8 179 aa12.67□□□□□ -0.38
PHTF1-205ENST00000393357 DPF1Q92782 380 aa12.67□□□□□ -0.38
PHTF1-205ENST00000393357 Q9UFV3 132 aa12.67□□□□□ -0.38
PHTF1-205ENST00000393357 SMAD5-AS1Q9Y6J3 95 aa12.67□□□□□ -0.38
PHTF1-205ENST00000393357 IGKV3D-20A0A0C4DH25 116 aa12.66□□□□□ -0.38
PHTF1-205ENST00000393357 HOXB4P17483 251 aaPredicted RBP12.66□□□□□ -0.38
PHTF1-205ENST00000393357 NBR2O15453 112 aa12.66□□□□□ -0.38
PHTF1-205ENST00000393357 CLEC3BP05452 202 aa12.66□□□□□ -0.38
PHTF1-205ENST00000393357 DLX6P56179 175 aa12.66□□□□□ -0.38
PHTF1-205ENST00000393357 PVRIGQ6DKI7 326 aa12.66□□□□□ -0.38
PHTF1-205ENST00000393357 CLEC19AQ6UXS0 136 aa12.66□□□□□ -0.38
PHTF1-205ENST00000393357 MRPS12O15235 138 aaKnown RBP12.65□□□□□ -0.38
PHTF1-205ENST00000393357 E7EQL1 145 aa12.65□□□□□ -0.38
PHTF1-205ENST00000393357 IGLV1-47P01700 117 aa12.65□□□□□ -0.38
PHTF1-205ENST00000393357 RNF183Q96D59 192 aa12.65□□□□□ -0.38
PHTF1-205ENST00000393357 PRADC1Q9BSG0 188 aa12.65□□□□□ -0.38
PHTF1-205ENST00000393357 TRBV20-1A0A075B6N2 111 aa12.64□□□□□ -0.39
PHTF1-205ENST00000393357 THBDP07204 575 aa12.64□□□□□ -0.39
PHTF1-205ENST00000393357 CRYGBP07316 175 aa12.64□□□□□ -0.39
PHTF1-205ENST00000393357 FANCD2OSQ96PS1 177 aa12.64□□□□□ -0.39
PHTF1-205ENST00000393357 COLQQ9Y215 455 aaPredicted RBP12.64□□□□□ -0.39
PHTF1-205ENST00000393357 PRSS29PA6NIE9 313 aa12.64□□□□□ -0.39
PHTF1-205ENST00000393357 ATP5LO75964 103 aa12.64□□□□□ -0.39
PHTF1-205ENST00000393357 XGP55808 180 aa12.64□□□□□ -0.39
PHTF1-205ENST00000393357 TMEM78Q5T7P6 136 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms