RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ORM1P02763 201 aa11.79□□□□□ -0.52
VLDLR-202ENST00000382099 Q6Q795 121 aa11.79□□□□□ -0.52
VLDLR-202ENST00000382099 PIP4P1Q86T03 277 aa11.79□□□□□ -0.52
VLDLR-202ENST00000382099 NDUFA11Q86Y39 141 aa11.79□□□□□ -0.52
VLDLR-202ENST00000382099 GATD1Q8NB37 220 aa11.79□□□□□ -0.52
VLDLR-202ENST00000382099 ODF3Q96PU9 254 aa11.79□□□□□ -0.52
VLDLR-202ENST00000382099 MDFICQ9P1T7 246 aa11.79□□□□□ -0.52
VLDLR-202ENST00000382099 U3KQA8 63 aa11.79□□□□□ -0.52
VLDLR-202ENST00000382099 ATP5IP56385 69 aaPredicted RBP11.79□□□□□ -0.52
VLDLR-202ENST00000382099 FAM236AA0A1B0GUQ0 79 aa11.78□□□□□ -0.52
VLDLR-202ENST00000382099 FAM236BA0A1B0GV22 79 aa11.78□□□□□ -0.52
VLDLR-202ENST00000382099 C11orf53Q8IXP5 236 aa11.78□□□□□ -0.52
VLDLR-202ENST00000382099 ACACAQ13085 2346 aa11.78□□□□□ -0.52
VLDLR-202ENST00000382099 PTPRBP23467 1997 aa11.78□□□□□ -0.52
VLDLR-202ENST00000382099 CTSZQ9UBR2 303 aa11.78□□□□□ -0.52
VLDLR-202ENST00000382099 IGHV1-45A0A0A0MS14 117 aa11.77□□□□□ -0.52
VLDLR-202ENST00000382099 UBE2D1P51668 147 aa11.77□□□□□ -0.52
VLDLR-202ENST00000382099 MED13LQ71F56 2210 aa11.77□□□□□ -0.53
VLDLR-202ENST00000382099 HERVK_113P63121 156 aa11.77□□□□□ -0.53
VLDLR-202ENST00000382099 ZCCHC24Q8N2G6 241 aaKnown RBP11.77□□□□□ -0.53
VLDLR-202ENST00000382099 KLF14Q8TD94 323 aaPredicted RBP11.77□□□□□ -0.53
VLDLR-202ENST00000382099 CXXC4Q9H2H0 198 aa11.77□□□□□ -0.53
VLDLR-202ENST00000382099 J3KT08 172 aa11.77□□□□□ -0.53
VLDLR-202ENST00000382099 TMEM75Q8N9X5 138 aa11.77□□□□□ -0.53
VLDLR-202ENST00000382099 SLC25A39Q9BZJ4 359 aaPredicted RBP11.77□□□□□ -0.53
VLDLR-202ENST00000382099 NDUFA4L2Q9NRX3 87 aa11.77□□□□□ -0.53
VLDLR-202ENST00000382099 H7C1H1 209 aa11.76□□□□□ -0.53
VLDLR-202ENST00000382099 AKAP6Q13023 2319 aa11.76□□□□□ -0.53
VLDLR-202ENST00000382099 PMVKQ15126 192 aa11.76□□□□□ -0.53
VLDLR-202ENST00000382099 OR13C6PQ8NH95 151 aa11.76□□□□□ -0.53
VLDLR-202ENST00000382099 IMMP1LQ96LU5 166 aa11.76□□□□□ -0.53
VLDLR-202ENST00000382099 MAP1AP78559 2803 aaPredicted RBP11.76□□□□□ -0.53
VLDLR-202ENST00000382099 F8VRH5 84 aa11.76□□□□□ -0.53
VLDLR-202ENST00000382099 DUSP14O95147 198 aaKnown RBP11.76□□□□□ -0.53
VLDLR-202ENST00000382099 COX6A1P12074 109 aa11.76□□□□□ -0.53
VLDLR-202ENST00000382099 DEFB108BQ8NET1 73 aa11.76□□□□□ -0.53
VLDLR-202ENST00000382099 PRR7Q8TB68 274 aa11.76□□□□□ -0.53
VLDLR-202ENST00000382099 HERVK_113P61574 105 aa11.75□□□□□ -0.53
VLDLR-202ENST00000382099 ATP1A1-AS1Q5TC04 95 aa11.75□□□□□ -0.53
VLDLR-202ENST00000382099 SVEP1Q4LDE5 3571 aa11.75□□□□□ -0.53
VLDLR-202ENST00000382099 TRAV26-2A0A0B4J265 109 aa11.75□□□□□ -0.53
VLDLR-202ENST00000382099 PINLYPA6NC86 204 aa11.75□□□□□ -0.53
VLDLR-202ENST00000382099 K7ESF4 209 aa11.75□□□□□ -0.53
VLDLR-202ENST00000382099 MFAP4P55083 255 aa11.75□□□□□ -0.53
VLDLR-202ENST00000382099 TCF15Q12870 199 aa11.75□□□□□ -0.53
VLDLR-202ENST00000382099 SBSPONQ8IVN8 264 aa11.75□□□□□ -0.53
VLDLR-202ENST00000382099 TRGV11A0A075B6L2 103 aa11.75□□□□□ -0.53
VLDLR-202ENST00000382099 LAGE3Q14657 143 aa11.75□□□□□ -0.53
VLDLR-202ENST00000382099 FAM201AQ5SY85 155 aa11.75□□□□□ -0.53
VLDLR-202ENST00000382099 THAP8Q8NA92 274 aa11.74□□□□□ -0.53
VLDLR-202ENST00000382099 Q8TAT8 98 aa11.74□□□□□ -0.53
VLDLR-202ENST00000382099 PRO1854Q9UHT4 67 aa11.74□□□□□ -0.53
VLDLR-202ENST00000382099 CSMD1Q96PZ7 3565 aa11.74□□□□□ -0.53
VLDLR-202ENST00000382099 H3BMM0 161 aa11.74□□□□□ -0.53
VLDLR-202ENST00000382099 MRPS12O15235 138 aaKnown RBP11.74□□□□□ -0.53
VLDLR-202ENST00000382099 ZNF474Q6S9Z5 364 aaPredicted RBP11.74□□□□□ -0.53
VLDLR-202ENST00000382099 UBE2WQ96B02 151 aa11.74□□□□□ -0.53
VLDLR-202ENST00000382099 TIMD4Q96H15 378 aa11.74□□□□□ -0.53
VLDLR-202ENST00000382099 SCGB3A1Q96QR1 104 aa11.74□□□□□ -0.53
VLDLR-202ENST00000382099 NDUFA7O95182 113 aa11.73□□□□□ -0.53
VLDLR-202ENST00000382099 CFC1BP0CG36 223 aa11.73□□□□□ -0.53
VLDLR-202ENST00000382099 CFC1P0CG37 223 aa11.73□□□□□ -0.53
VLDLR-202ENST00000382099 EGR2P11161 476 aaPredicted RBP11.73□□□□□ -0.53
VLDLR-202ENST00000382099 POU2AF1Q16633 256 aa11.73□□□□□ -0.53
VLDLR-202ENST00000382099 C1orf162Q8NEQ5 155 aaPredicted RBP11.73□□□□□ -0.53
VLDLR-202ENST00000382099 IGKV1D-17A0A075B6S4 117 aa11.73□□□□□ -0.53
VLDLR-202ENST00000382099 Q8N8P6 123 aa11.73□□□□□ -0.53
VLDLR-202ENST00000382099 SAP25Q8TEE9 199 aa11.73□□□□□ -0.53
VLDLR-202ENST00000382099 DUX3Q96PT4 197 aa11.73□□□□□ -0.53
VLDLR-202ENST00000382099 IQCF6A8MYZ5 107 aa11.73□□□□□ -0.53
VLDLR-202ENST00000382099 TIMM23O14925 209 aa11.73□□□□□ -0.53
VLDLR-202ENST00000382099 SPRNQ5BIV9 151 aa11.73□□□□□ -0.53
VLDLR-202ENST00000382099 RNF185Q96GF1 192 aa11.73□□□□□ -0.53
VLDLR-202ENST00000382099 MRPL20Q9BYC9 149 aaKnown RBP11.73□□□□□ -0.53
VLDLR-202ENST00000382099 IGKV2-40A0A087WW87 121 aaPredicted RBP11.72□□□□□ -0.53
VLDLR-202ENST00000382099 IGKV2D-40P01614 121 aaPredicted RBP11.72□□□□□ -0.53
VLDLR-202ENST00000382099 IGLC6P0CF74 106 aa11.72□□□□□ -0.53
VLDLR-202ENST00000382099 LINC01559Q495D7 138 aa11.72□□□□□ -0.53
VLDLR-202ENST00000382099 LYZL6O75951 148 aa11.72□□□□□ -0.53
VLDLR-202ENST00000382099 ENSAO43768 121 aaKnown RBP11.71□□□□□ -0.53
VLDLR-202ENST00000382099 C6orf15Q6UXA7 325 aaPredicted RBP11.71□□□□□ -0.53
VLDLR-202ENST00000382099 F5H768 121 aa11.71□□□□□ -0.53
VLDLR-202ENST00000382099 C2orf82Q6UX34 121 aa11.71□□□□□ -0.53
VLDLR-202ENST00000382099 OR4C13Q8NGP0 309 aa11.71□□□□□ -0.53
VLDLR-202ENST00000382099 TMEM101Q96IK0 257 aa11.71□□□□□ -0.53
VLDLR-202ENST00000382099 TECTAO75443 2155 aa11.71□□□□□ -0.54
VLDLR-202ENST00000382099 RBAKDNA6NC62 111 aa11.71□□□□□ -0.54
VLDLR-202ENST00000382099 Q0VFX4 171 aa11.71□□□□□ -0.54
VLDLR-202ENST00000382099 ZZEF1O43149 2961 aa11.7□□□□□ -0.54
VLDLR-202ENST00000382099 TNRC6BQ9UPQ9 1833 aaKnown RBP11.7□□□□□ -0.54
VLDLR-202ENST00000382099 IGKV3D-15A0A087WSY6 115 aa11.7□□□□□ -0.54
VLDLR-202ENST00000382099 CEMP1Q6PRD7 247 aaPredicted RBP11.7□□□□□ -0.54
VLDLR-202ENST00000382099 DTX2Q86UW9 622 aa11.7□□□□□ -0.54
VLDLR-202ENST00000382099 ZNF256Q9Y2P7 627 aaPredicted RBP11.7□□□□□ -0.54
VLDLR-202ENST00000382099 CD3EP07766 207 aa11.7□□□□□ -0.54
VLDLR-202ENST00000382099 C17orf58Q2M2W7 97 aa11.7□□□□□ -0.54
VLDLR-202ENST00000382099 DUX4L9Q6RFH8 374 aaPredicted RBP11.7□□□□□ -0.54
VLDLR-202ENST00000382099 DEFB104AQ8WTQ1 72 aa11.7□□□□□ -0.54
VLDLR-202ENST00000382099 SCNM1Q9BWG6 230 aa11.7□□□□□ -0.54
VLDLR-202ENST00000382099 ZNF71Q9NQZ8 489 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms