RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 LINC01549A6NIU2 74 aa7.21□□□□□ -1.25
LIMCH1-202ENST00000381753 NDUFS5O43920 106 aa7.21□□□□□ -1.25
LIMCH1-202ENST00000381753 DIAPH2-AS1Q14236 149 aa7.21□□□□□ -1.25
LIMCH1-202ENST00000381753 CBLN2Q8IUK8 224 aa7.21□□□□□ -1.25
LIMCH1-202ENST00000381753 CHD8Q9HCK8 2581 aa7.21□□□□□ -1.25
LIMCH1-202ENST00000381753 ADMP35318 185 aa7.21□□□□□ -1.26
LIMCH1-202ENST00000381753 ZNF124Q15973 351 aa7.21□□□□□ -1.26
LIMCH1-202ENST00000381753 LAIR2Q6ISS4 152 aa7.21□□□□□ -1.26
LIMCH1-202ENST00000381753 AMTNQ6UX39 209 aa7.21□□□□□ -1.26
LIMCH1-202ENST00000381753 MTURNQ8N3F0 131 aa7.21□□□□□ -1.26
LIMCH1-202ENST00000381753 ANK1P16157 1881 aa7.21□□□□□ -1.26
LIMCH1-202ENST00000381753 PFN2P35080 140 aa7.21□□□□□ -1.26
LIMCH1-202ENST00000381753 MRPL36Q9P0J6 103 aaKnown RBP7.21□□□□□ -1.26
LIMCH1-202ENST00000381753 NUP210Q8TEM1 1887 aaPredicted RBP7.21□□□□□ -1.26
LIMCH1-202ENST00000381753 A0A0J9YWU9 116 aa7.21□□□□□ -1.26
LIMCH1-202ENST00000381753 RNF152Q8N8N0 203 aa7.21□□□□□ -1.26
LIMCH1-202ENST00000381753 MIXL1Q9H2W2 232 aa7.21□□□□□ -1.26
LIMCH1-202ENST00000381753 VWC2LB2RUY7 222 aa7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 ITGB1BP1O14713 200 aa7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 PSMG3Q9BT73 122 aaPredicted RBP7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 IGHG2P01859 326 aa7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 PRIMA1Q86XR5 153 aa7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 SHANK2-AS3Q9BTD1 123 aa7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 PNRC2Q9NPJ4 139 aaKnown RBP7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 LINC00473A8K010 186 aa7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 CTSGP08311 255 aa7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 FOXL2NBQ6ZUU3 175 aa7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 MRPL53Q96EL3 112 aaKnown RBP7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 NCOR1P1Q9H4R4 102 aa7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 NAV3Q8IVL0 2385 aa7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 FOXA3P55318 350 aaPredicted RBP7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 NPC2P61916 151 aa7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 KIR2DL5BQ8NHK3 375 aa7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 TRAV26-1A0A087WT03 109 aa7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 MIFP14174 115 aa7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 ZNF134P52741 427 aa7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 LYPD6BQ8NI32 183 aa7.2□□□□□ -1.26
LIMCH1-202ENST00000381753 A0A087WZ39 114 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 PROP1O75360 226 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 PMVKQ15126 192 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 MBD3L1Q8WWY6 194 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 WWC2-AS2Q96NR7 200 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 B9D2Q9BPU9 175 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 KLK12Q9UKR0 248 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 SH2D1AO60880 128 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 CXCL3P19876 107 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 LINC00205P59089 165 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 PLCE1Q9P212 2302 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 HIST2H2BDQ6DRA6 164 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 OR11H7Q8NGC8 314 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 V9GYH0 126 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 ARMS2P0C7Q2 107 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 TMEM190Q8WZ59 177 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 LINC00479Q96M42 142 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 TPSG1Q9NRR2 321 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 FANCMQ8IYD8 2048 aa7.19□□□□□ -1.26
LIMCH1-202ENST00000381753 TRAV8-3A0A0A6YYJ7 113 aa7.18□□□□□ -1.26
LIMCH1-202ENST00000381753 IGHV7-81A0A0B4J1V7 117 aa7.18□□□□□ -1.26
LIMCH1-202ENST00000381753 SCO2A0A1W2PP80 73 aa7.18□□□□□ -1.26
LIMCH1-202ENST00000381753 SIVA1O15304 175 aa7.18□□□□□ -1.26
LIMCH1-202ENST00000381753 TRAV2A0A0B4J234 112 aa7.18□□□□□ -1.26
LIMCH1-202ENST00000381753 MMP23AO75900 390 aa7.18□□□□□ -1.26
LIMCH1-202ENST00000381753 CXCL2P19875 107 aa7.18□□□□□ -1.26
LIMCH1-202ENST00000381753 WISP2O76076 250 aa7.18□□□□□ -1.26
LIMCH1-202ENST00000381753 PARD6GQ9BYG4 376 aaPredicted RBP7.18□□□□□ -1.26
LIMCH1-202ENST00000381753 SUMO4Q6EEV6 95 aa7.18□□□□□ -1.26
LIMCH1-202ENST00000381753 FAM229AH3BQW9 127 aa7.18□□□□□ -1.26
LIMCH1-202ENST00000381753 FAM222AQ5U5X8 452 aa7.18□□□□□ -1.26
LIMCH1-202ENST00000381753 TMEM61Q8N0U2 210 aa7.18□□□□□ -1.26
LIMCH1-202ENST00000381753 LYPD1Q8N2G4 141 aa7.18□□□□□ -1.26
LIMCH1-202ENST00000381753 IGLV5-52A0A0A0MRZ9 124 aa7.17□□□□□ -1.26
LIMCH1-202ENST00000381753 A0A1B0GV72 72 aa7.17□□□□□ -1.26
LIMCH1-202ENST00000381753 PPBPP02775 128 aa7.17□□□□□ -1.26
LIMCH1-202ENST00000381753 RNASE2P10153 161 aaKnown RBP7.17□□□□□ -1.26
LIMCH1-202ENST00000381753 CLDN16Q9Y5I7 305 aa7.17□□□□□ -1.26
LIMCH1-202ENST00000381753 LOC105371267A0A1B0GV96 52 aa7.17□□□□□ -1.26
LIMCH1-202ENST00000381753 A0A1B0GWB2 263 aa7.17□□□□□ -1.26
LIMCH1-202ENST00000381753 NANOS2P60321 138 aaKnown RBP7.17□□□□□ -1.26
LIMCH1-202ENST00000381753 SPRNQ5BIV9 151 aa7.17□□□□□ -1.26
LIMCH1-202ENST00000381753 CHTOPQ9Y3Y2 248 aaKnown RBP7.17□□□□□ -1.26
LIMCH1-202ENST00000381753 FHL1Q13642 323 aa7.17□□□□□ -1.26
LIMCH1-202ENST00000381753 SMIM9A6NGZ8 99 aa7.17□□□□□ -1.26
LIMCH1-202ENST00000381753 I3L3M4 83 aa7.17□□□□□ -1.26
LIMCH1-202ENST00000381753 UBE2D3P61077 147 aa7.17□□□□□ -1.26
LIMCH1-202ENST00000381753 KLF12Q9Y4X4 402 aa7.17□□□□□ -1.26
LIMCH1-202ENST00000381753 TRAV26-2A0A0B4J265 109 aa7.16□□□□□ -1.26
LIMCH1-202ENST00000381753 K7EQD1 137 aa7.16□□□□□ -1.26
LIMCH1-202ENST00000381753 LEPROTO15243 131 aa7.16□□□□□ -1.26
LIMCH1-202ENST00000381753 IRF3Q14653 427 aa7.16□□□□□ -1.26
LIMCH1-202ENST00000381753 ATXN8Q156A1 80 aa7.16□□□□□ -1.26
LIMCH1-202ENST00000381753 Q8N9W7 124 aa7.16□□□□□ -1.26
LIMCH1-202ENST00000381753 SPATA3Q8NHX4 192 aa7.16□□□□□ -1.26
LIMCH1-202ENST00000381753 PLXND1Q9Y4D7 1925 aa7.16□□□□□ -1.26
LIMCH1-202ENST00000381753 LYRM9A8MSI8 78 aa7.16□□□□□ -1.26
LIMCH1-202ENST00000381753 TCRAP04437 139 aa7.16□□□□□ -1.26
LIMCH1-202ENST00000381753 WDR86Q86TI4 376 aa7.16□□□□□ -1.26
LIMCH1-202ENST00000381753 PRO0255Q9UI72 69 aa7.16□□□□□ -1.26
LIMCH1-202ENST00000381753 HIVEP3Q5T1R4 2406 aa7.16□□□□□ -1.26
LIMCH1-202ENST00000381753 PDE6HQ13956 83 aa7.16□□□□□ -1.26
LIMCH1-202ENST00000381753 LY6G5BQ8NDX9 201 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms