RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 IGHV3-53P01767 116 aa11.86□□□□□ -0.51
HMGN1-204ENST00000380749 LINC00315P59091 139 aa11.86□□□□□ -0.51
HMGN1-204ENST00000380749 UBE2L3P68036 154 aaKnown RBP11.86□□□□□ -0.51
HMGN1-204ENST00000380749 SLAQ13239 276 aa11.86□□□□□ -0.51
HMGN1-204ENST00000380749 PRO0255Q9UI72 69 aa11.86□□□□□ -0.51
HMGN1-204ENST00000380749 RBAKDNA6NC62 111 aa11.85□□□□□ -0.51
HMGN1-204ENST00000380749 UPK1BO75841 260 aa11.85□□□□□ -0.51
HMGN1-204ENST00000380749 ATP5SQ99766 215 aa11.85□□□□□ -0.51
HMGN1-204ENST00000380749 NXPH4O95158 308 aa11.84□□□□□ -0.51
HMGN1-204ENST00000380749 PET100P0DJ07 73 aa11.84□□□□□ -0.51
HMGN1-204ENST00000380749 KHDC3LQ587J8 217 aa11.84□□□□□ -0.51
HMGN1-204ENST00000380749 LYPD1Q8N2G4 141 aa11.84□□□□□ -0.51
HMGN1-204ENST00000380749 H0YIZ8 118 aa11.83□□□□□ -0.52
HMGN1-204ENST00000380749 TAS2R45P59539 299 aa11.83□□□□□ -0.52
HMGN1-204ENST00000380749 RANP62826 216 aaKnown RBP11.83□□□□□ -0.52
HMGN1-204ENST00000380749 ZNF266Q14584 549 aa11.83□□□□□ -0.52
HMGN1-204ENST00000380749 FFAR4Q5NUL3 377 aa11.83□□□□□ -0.52
HMGN1-204ENST00000380749 PPP1R1CQ8WVI7 109 aa11.83□□□□□ -0.52
HMGN1-204ENST00000380749 INMT-MINDY4F8WBC2 141 aa11.82□□□□□ -0.52
HMGN1-204ENST00000380749 CRYBA4P53673 196 aa11.82□□□□□ -0.52
HMGN1-204ENST00000380749 KRTAP10-2P60368 255 aa11.82□□□□□ -0.52
HMGN1-204ENST00000380749 MRPL23Q16540 153 aaKnown RBP11.82□□□□□ -0.52
HMGN1-204ENST00000380749 MUC21Q5SSG8 566 aa11.82□□□□□ -0.52
HMGN1-204ENST00000380749 Q6ZQT7 251 aa11.82□□□□□ -0.52
HMGN1-204ENST00000380749 C8orf49Q96NF6 230 aa11.82□□□□□ -0.52
HMGN1-204ENST00000380749 HHLA3Q9XRX5 114 aa11.82□□□□□ -0.52
HMGN1-204ENST00000380749 TRGV4A0A0C4DH28 118 aa11.81□□□□□ -0.52
HMGN1-204ENST00000380749 IFNA5P01569 189 aa11.81□□□□□ -0.52
HMGN1-204ENST00000380749 HSPB11Q9Y547 144 aa11.81□□□□□ -0.52
HMGN1-204ENST00000380749 LENEPQ9Y5L5 61 aa11.81□□□□□ -0.52
HMGN1-204ENST00000380749 TRGV11A0A075B6L2 103 aa11.8□□□□□ -0.52
HMGN1-204ENST00000380749 EREGO14944 169 aa11.8□□□□□ -0.52
HMGN1-204ENST00000380749 SSNA1O43805 119 aa11.8□□□□□ -0.52
HMGN1-204ENST00000380749 H2BFSP57053 126 aa11.8□□□□□ -0.52
HMGN1-204ENST00000380749 ERVFC1-1P60608 527 aa11.8□□□□□ -0.52
HMGN1-204ENST00000380749 FHL2Q14192 279 aa11.8□□□□□ -0.52
HMGN1-204ENST00000380749 Q6AWC8 147 aa11.8□□□□□ -0.52
HMGN1-204ENST00000380749 FAM159AQ6UWV7 190 aa11.8□□□□□ -0.52
HMGN1-204ENST00000380749 NEGR1Q7Z3B1 354 aa11.8□□□□□ -0.52
HMGN1-204ENST00000380749 SCGB1C1Q8TD33 95 aa11.8□□□□□ -0.52
HMGN1-204ENST00000380749 PCNPQ8WW12 178 aaKnown RBP11.8□□□□□ -0.52
HMGN1-204ENST00000380749 FAT1Q14517 4588 aa11.8□□□□□ -0.52
HMGN1-204ENST00000380749 DIRC3C9JPN6 131 aa11.79□□□□□ -0.52
HMGN1-204ENST00000380749 MPC2O95563 127 aa11.79□□□□□ -0.52
HMGN1-204ENST00000380749 SRIP30626 198 aa11.79□□□□□ -0.52
HMGN1-204ENST00000380749 TMEM183BQ1AE95 376 aa11.79□□□□□ -0.52
HMGN1-204ENST00000380749 FAM74A1Q5RGS3 127 aa11.79□□□□□ -0.52
HMGN1-204ENST00000380749 Q6ZRN7 208 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-204ENST00000380749 TMEM183AQ8IXX5 376 aa11.79□□□□□ -0.52
HMGN1-204ENST00000380749 Q8N1X5 172 aa11.79□□□□□ -0.52
HMGN1-204ENST00000380749 CMTM2Q8TAZ6 248 aa11.79□□□□□ -0.52
HMGN1-204ENST00000380749 SPXQ9BT56 116 aa11.79□□□□□ -0.52
HMGN1-204ENST00000380749 NFE4Q86UQ8 179 aa11.79□□□□□ -0.52
HMGN1-204ENST00000380749 OR10G4Q8NGN3 311 aa11.79□□□□□ -0.52
HMGN1-204ENST00000380749 TMED6Q8WW62 240 aa11.79□□□□□ -0.52
HMGN1-204ENST00000380749 SMIM3Q9BZL3 60 aa11.79□□□□□ -0.52
HMGN1-204ENST00000380749 OTORQ9NRC9 128 aa11.79□□□□□ -0.52
HMGN1-204ENST00000380749 PTTG2Q9NZH5 202 aa11.79□□□□□ -0.52
HMGN1-204ENST00000380749 MDFICQ9P1T7 246 aa11.79□□□□□ -0.52
HMGN1-204ENST00000380749 NAGKQ9UJ70 344 aa11.79□□□□□ -0.52
HMGN1-204ENST00000380749 TRAV9-2A0A087WT02 112 aa11.78□□□□□ -0.52
HMGN1-204ENST00000380749 RPL12P30050 165 aaKnown RBP11.78□□□□□ -0.52
HMGN1-204ENST00000380749 LYPD5Q6UWN5 251 aa11.78□□□□□ -0.52
HMGN1-204ENST00000380749 HYLS1Q96M11 299 aa11.78□□□□□ -0.52
HMGN1-204ENST00000380749 MARVELD1Q9BSK0 173 aa11.78□□□□□ -0.52
HMGN1-204ENST00000380749 SCRT2Q9NQ03 307 aa11.78□□□□□ -0.52
HMGN1-204ENST00000380749 RPH3ALQ9UNE2 315 aa11.78□□□□□ -0.52
HMGN1-204ENST00000380749 LY96Q9Y6Y9 160 aa11.78□□□□□ -0.52
HMGN1-204ENST00000380749 ORM1P02763 201 aa11.77□□□□□ -0.53
HMGN1-204ENST00000380749 SFTA3P0C7M3 94 aa11.77□□□□□ -0.53
HMGN1-204ENST00000380749 DEFA1P59665 94 aa11.77□□□□□ -0.53
HMGN1-204ENST00000380749 DEFA3P59666 94 aa11.77□□□□□ -0.53
HMGN1-204ENST00000380749 IQCF2Q8IXL9 164 aa11.77□□□□□ -0.53
HMGN1-204ENST00000380749 RASL10AQ92737 203 aa11.77□□□□□ -0.53
HMGN1-204ENST00000380749 ZNF479Q96JC4 524 aa11.77□□□□□ -0.53
HMGN1-204ENST00000380749 C9JCJ5 164 aa11.76□□□□□ -0.53
HMGN1-204ENST00000380749 K7EQD1 137 aa11.76□□□□□ -0.53
HMGN1-204ENST00000380749 IFITM3Q01628 133 aa11.76□□□□□ -0.53
HMGN1-204ENST00000380749 ACOT6Q3I5F7 207 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-204ENST00000380749 PQLC2Q6ZP29 291 aa11.76□□□□□ -0.53
HMGN1-204ENST00000380749 TXNDC17Q9BRA2 123 aa11.76□□□□□ -0.53
HMGN1-204ENST00000380749 MBD2Q9UBB5 411 aa11.76□□□□□ -0.53
HMGN1-204ENST00000380749 VPS13BQ7Z7G8 4022 aa11.75□□□□□ -0.53
HMGN1-204ENST00000380749 TRAV4A0A0B4J268 109 aa11.75□□□□□ -0.53
HMGN1-204ENST00000380749 A0A1W2PPV4 95 aa11.75□□□□□ -0.53
HMGN1-204ENST00000380749 K7EP13 123 aa11.75□□□□□ -0.53
HMGN1-204ENST00000380749 GYPEP15421 78 aa11.75□□□□□ -0.53
HMGN1-204ENST00000380749 TDRG1Q3Y452 100 aa11.75□□□□□ -0.53
HMGN1-204ENST00000380749 CDPF1Q6NVV7 123 aa11.75□□□□□ -0.53
HMGN1-204ENST00000380749 PGPEP1Q9NXJ5 209 aa11.75□□□□□ -0.53
HMGN1-204ENST00000380749 DMBT1Q9UGM3 2413 aaPredicted RBP11.74□□□□□ -0.53
HMGN1-204ENST00000380749 TRAV21A0A0B4J279 112 aa11.74□□□□□ -0.53
HMGN1-204ENST00000380749 PGPA6NDG6 321 aa11.74□□□□□ -0.53
HMGN1-204ENST00000380749 M0R2P5 195 aa11.74□□□□□ -0.53
HMGN1-204ENST00000380749 EVI2AP22794 236 aa11.74□□□□□ -0.53
HMGN1-204ENST00000380749 GOLT1AQ6ZVE7 132 aa11.74□□□□□ -0.53
HMGN1-204ENST00000380749 EIF3GO75821 320 aaKnown RBP eCLIP11.73□□□□□ -0.53
HMGN1-204ENST00000380749 WFDC10BQ8IUB3 73 aa11.73□□□□□ -0.53
HMGN1-204ENST00000380749 ARL6IP6Q8N6S5 226 aa11.73□□□□□ -0.53
HMGN1-204ENST00000380749 OR4C5Q8NGB2 326 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms