RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 NMES1Q9C002 83 aa11.54□□□□□ -0.56
SMN2-201ENST00000380741 WDR61Q9GZS3 305 aaKnown RBP11.54□□□□□ -0.56
SMN2-201ENST00000380741 KCNIP2Q9NS61 270 aa11.54□□□□□ -0.56
SMN2-201ENST00000380741 PRO0255Q9UI72 69 aa11.54□□□□□ -0.56
SMN2-201ENST00000380741 CRYBA4P53673 196 aa11.53□□□□□ -0.56
SMN2-201ENST00000380741 ZNF415Q09FC8 603 aa11.53□□□□□ -0.56
SMN2-201ENST00000380741 C8orf49Q96NF6 230 aa11.53□□□□□ -0.56
SMN2-201ENST00000380741 SCRT2Q9NQ03 307 aa11.53□□□□□ -0.56
SMN2-201ENST00000380741 TRBV7-9A0A0J9YWB2 115 aa11.52□□□□□ -0.57
SMN2-201ENST00000380741 OR7C2O60412 319 aa11.52□□□□□ -0.57
SMN2-201ENST00000380741 FHL2Q14192 279 aa11.52□□□□□ -0.57
SMN2-201ENST00000380741 MUC21Q5SSG8 566 aa11.52□□□□□ -0.57
SMN2-201ENST00000380741 ENKURQ8TC29 256 aa11.52□□□□□ -0.57
SMN2-201ENST00000380741 HHLA3Q9XRX5 114 aa11.52□□□□□ -0.57
SMN2-201ENST00000380741 FAT1Q14517 4588 aa11.51□□□□□ -0.57
SMN2-201ENST00000380741 RANP62826 216 aaKnown RBP11.51□□□□□ -0.57
SMN2-201ENST00000380741 SLAQ13239 276 aa11.51□□□□□ -0.57
SMN2-201ENST00000380741 ZNF266Q14584 549 aa11.51□□□□□ -0.57
SMN2-201ENST00000380741 LINC00299Q6ZSB3 139 aa11.51□□□□□ -0.57
SMN2-201ENST00000380741 RBAKDNA6NC62 111 aa11.5□□□□□ -0.57
SMN2-201ENST00000380741 C17orf112F2Z3M2 114 aa11.5□□□□□ -0.57
SMN2-201ENST00000380741 PRAF2O60831 178 aa11.5□□□□□ -0.57
SMN2-201ENST00000380741 CSN1S1P47710 185 aa11.5□□□□□ -0.57
SMN2-201ENST00000380741 UBE2L3P68036 154 aaKnown RBP11.5□□□□□ -0.57
SMN2-201ENST00000380741 MRPL23Q16540 153 aaKnown RBP11.5□□□□□ -0.57
SMN2-201ENST00000380741 LYPD5Q6UWN5 251 aa11.5□□□□□ -0.57
SMN2-201ENST00000380741 S100ZQ8WXG8 99 aa11.5□□□□□ -0.57
SMN2-201ENST00000380741 MDFICQ9P1T7 246 aa11.5□□□□□ -0.57
SMN2-201ENST00000380741 TNFRSF18Q9Y5U5 241 aa11.5□□□□□ -0.57
SMN2-201ENST00000380741 FUSP35637 526 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMN2-201ENST00000380741 CYCSP99999 105 aaKnown RBP11.49□□□□□ -0.57
SMN2-201ENST00000380741 LYPD1Q8N2G4 141 aa11.49□□□□□ -0.57
SMN2-201ENST00000380741 ATP5SQ99766 215 aa11.49□□□□□ -0.57
SMN2-201ENST00000380741 TRGV4A0A0C4DH28 118 aa11.48□□□□□ -0.57
SMN2-201ENST00000380741 K7EQD1 137 aa11.48□□□□□ -0.57
SMN2-201ENST00000380741 SFTA3P0C7M3 94 aa11.48□□□□□ -0.57
SMN2-201ENST00000380741 H2BFSP57053 126 aa11.48□□□□□ -0.57
SMN2-201ENST00000380741 TMEM183BQ1AE95 376 aa11.48□□□□□ -0.57
SMN2-201ENST00000380741 FFAR4Q5NUL3 377 aa11.48□□□□□ -0.57
SMN2-201ENST00000380741 Q6AWC8 147 aa11.48□□□□□ -0.57
SMN2-201ENST00000380741 NEGR1Q7Z3B1 354 aa11.48□□□□□ -0.57
SMN2-201ENST00000380741 TMEM183AQ8IXX5 376 aa11.48□□□□□ -0.57
SMN2-201ENST00000380741 PPP1R1CQ8WVI7 109 aa11.48□□□□□ -0.57
SMN2-201ENST00000380741 ZNF479Q96JC4 524 aa11.48□□□□□ -0.57
SMN2-201ENST00000380741 DIRC3C9JPN6 131 aa11.47□□□□□ -0.57
SMN2-201ENST00000380741 UPK1BO75841 260 aa11.47□□□□□ -0.57
SMN2-201ENST00000380741 ERVFC1-1P60608 527 aa11.47□□□□□ -0.57
SMN2-201ENST00000380741 KHDC3LQ587J8 217 aa11.47□□□□□ -0.57
SMN2-201ENST00000380741 OR10G4Q8NGN3 311 aa11.47□□□□□ -0.57
SMN2-201ENST00000380741 RASL10AQ92737 203 aa11.47□□□□□ -0.57
SMN2-201ENST00000380741 INMT-MINDY4F8WBC2 141 aa11.46□□□□□ -0.57
SMN2-201ENST00000380741 EREGO14944 169 aa11.46□□□□□ -0.57
SMN2-201ENST00000380741 EIF3GO75821 320 aaKnown RBP eCLIP11.46□□□□□ -0.57
SMN2-201ENST00000380741 SRIP30626 198 aa11.46□□□□□ -0.57
SMN2-201ENST00000380741 IFITM3Q01628 133 aa11.46□□□□□ -0.57
SMN2-201ENST00000380741 FAM159AQ6UWV7 190 aa11.46□□□□□ -0.57
SMN2-201ENST00000380741 IQCF2Q8IXL9 164 aa11.46□□□□□ -0.57
SMN2-201ENST00000380741 HYLS1Q96M11 299 aa11.46□□□□□ -0.57
SMN2-201ENST00000380741 SPXQ9BT56 116 aa11.46□□□□□ -0.57
SMN2-201ENST00000380741 PGPEP1Q9NXJ5 209 aa11.46□□□□□ -0.57
SMN2-201ENST00000380741 HSPB11Q9Y547 144 aa11.46□□□□□ -0.57
SMN2-201ENST00000380741 LENEPQ9Y5L5 61 aa11.46□□□□□ -0.57
SMN2-201ENST00000380741 LY96Q9Y6Y9 160 aa11.46□□□□□ -0.57
SMN2-201ENST00000380741 TRGV11A0A075B6L2 103 aa11.45□□□□□ -0.58
SMN2-201ENST00000380741 TAS2R45P59539 299 aa11.45□□□□□ -0.58
SMN2-201ENST00000380741 NFE4Q86UQ8 179 aa11.45□□□□□ -0.58
SMN2-201ENST00000380741 WFDC10BQ8IUB3 73 aa11.45□□□□□ -0.58
SMN2-201ENST00000380741 SMIM3Q9BZL3 60 aa11.45□□□□□ -0.58
SMN2-201ENST00000380741 NAGKQ9UJ70 344 aa11.45□□□□□ -0.58
SMN2-201ENST00000380741 TRAV9-2A0A087WT02 112 aa11.44□□□□□ -0.58
SMN2-201ENST00000380741 MPC2O95563 127 aa11.44□□□□□ -0.58
SMN2-201ENST00000380741 DNAH10OSP0CZ25 163 aa11.44□□□□□ -0.58
SMN2-201ENST00000380741 GYPEP15421 78 aa11.44□□□□□ -0.58
SMN2-201ENST00000380741 TDRG1Q3Y452 100 aa11.44□□□□□ -0.58
SMN2-201ENST00000380741 SCGB1C1Q8TD33 95 aa11.44□□□□□ -0.58
SMN2-201ENST00000380741 PCNPQ8WW12 178 aaKnown RBP11.44□□□□□ -0.58
SMN2-201ENST00000380741 TMED6Q8WW62 240 aa11.44□□□□□ -0.58
SMN2-201ENST00000380741 OTORQ9NRC9 128 aa11.44□□□□□ -0.58
SMN2-201ENST00000380741 RPH3ALQ9UNE2 315 aa11.44□□□□□ -0.58
SMN2-201ENST00000380741 A0A087WTM6 91 aa11.43□□□□□ -0.58
SMN2-201ENST00000380741 IFNA5P01569 189 aa11.43□□□□□ -0.58
SMN2-201ENST00000380741 ORM1P02763 201 aa11.43□□□□□ -0.58
SMN2-201ENST00000380741 CDPF1Q6NVV7 123 aa11.43□□□□□ -0.58
SMN2-201ENST00000380741 MARVELD1Q9BSK0 173 aa11.43□□□□□ -0.58
SMN2-201ENST00000380741 PTTG2Q9NZH5 202 aa11.43□□□□□ -0.58
SMN2-201ENST00000380741 HERC1Q15751 4861 aa11.43□□□□□ -0.58
SMN2-201ENST00000380741 TRAV4A0A0B4J268 109 aa11.42□□□□□ -0.58
SMN2-201ENST00000380741 PGPA6NDG6 321 aa11.42□□□□□ -0.58
SMN2-201ENST00000380741 SSNA1O43805 119 aa11.42□□□□□ -0.58
SMN2-201ENST00000380741 PET100P0DJ07 73 aa11.42□□□□□ -0.58
SMN2-201ENST00000380741 RPL12P30050 165 aaKnown RBP11.42□□□□□ -0.58
SMN2-201ENST00000380741 CMTM2Q8TAZ6 248 aa11.42□□□□□ -0.58
SMN2-201ENST00000380741 MSRB1Q9NZV6 116 aa11.42□□□□□ -0.58
SMN2-201ENST00000380741 MBD2Q9UBB5 411 aa11.42□□□□□ -0.58
SMN2-201ENST00000380741 EPM2AB3EWF7 344 aa11.41□□□□□ -0.58
SMN2-201ENST00000380741 C9JCJ5 164 aa11.41□□□□□ -0.58
SMN2-201ENST00000380741 M0R2P5 195 aa11.41□□□□□ -0.58
SMN2-201ENST00000380741 GNRH2O43555 120 aa11.41□□□□□ -0.58
SMN2-201ENST00000380741 EVI2AP22794 236 aa11.41□□□□□ -0.58
SMN2-201ENST00000380741 GOLT1AQ6ZVE7 132 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms