RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 LINC01551Q86U37 167 aa10.36□□□□□ -0.75
HERPUD1-203ENST00000379792 SDF2L1Q9HCN8 221 aa10.36□□□□□ -0.75
HERPUD1-203ENST00000379792 KRBOX1C9JBD0 128 aa10.35□□□□□ -0.75
HERPUD1-203ENST00000379792 GCGP01275 180 aa10.35□□□□□ -0.75
HERPUD1-203ENST00000379792 LEPP41159 167 aa10.35□□□□□ -0.75
HERPUD1-203ENST00000379792 CRIP1P50238 77 aa10.35□□□□□ -0.75
HERPUD1-203ENST00000379792 RPL23P62829 140 aaKnown RBP10.35□□□□□ -0.75
HERPUD1-203ENST00000379792 BTN1A1Q13410 526 aa10.35□□□□□ -0.75
HERPUD1-203ENST00000379792 LINC00322Q6ZN03 302 aaPredicted RBP10.35□□□□□ -0.75
HERPUD1-203ENST00000379792 XCL2Q9UBD3 114 aa10.35□□□□□ -0.75
HERPUD1-203ENST00000379792 LENEPQ9Y5L5 61 aa10.35□□□□□ -0.75
HERPUD1-203ENST00000379792 ATP6V1G1O75348 118 aa10.34□□□□□ -0.75
HERPUD1-203ENST00000379792 APOC3P02656 99 aa10.34□□□□□ -0.75
HERPUD1-203ENST00000379792 CRISP2P16562 243 aa10.34□□□□□ -0.75
HERPUD1-203ENST00000379792 SMUG1Q53HV7 270 aa10.34□□□□□ -0.75
HERPUD1-203ENST00000379792 CLUHP3Q96NS8 147 aa10.34□□□□□ -0.75
HERPUD1-203ENST00000379792 ODF3Q96PU9 254 aa10.34□□□□□ -0.75
HERPUD1-203ENST00000379792 CARHSP1Q9Y2V2 147 aaKnown RBP10.34□□□□□ -0.75
HERPUD1-203ENST00000379792 TRAV12-3A0A0B4J271 114 aa10.34□□□□□ -0.75
HERPUD1-203ENST00000379792 TSPOP30536 169 aa10.34□□□□□ -0.75
HERPUD1-203ENST00000379792 CDKN1BP46527 198 aa10.34□□□□□ -0.75
HERPUD1-203ENST00000379792 GFI1BQ5VTD9 330 aa10.34□□□□□ -0.75
HERPUD1-203ENST00000379792 KLLNB2CW77 178 aa10.33□□□□□ -0.76
HERPUD1-203ENST00000379792 M0R036 132 aa10.33□□□□□ -0.76
HERPUD1-203ENST00000379792 CRXO43186 299 aaPredicted RBP10.33□□□□□ -0.76
HERPUD1-203ENST00000379792 GIG44P09565 113 aaPredicted RBP10.33□□□□□ -0.76
HERPUD1-203ENST00000379792 LY96Q9Y6Y9 160 aa10.33□□□□□ -0.76
HERPUD1-203ENST00000379792 LOC102724200A0A096LPH7 203 aaPredicted RBP10.32□□□□□ -0.76
HERPUD1-203ENST00000379792 TRBV7-9A0A0J9YWB2 115 aa10.32□□□□□ -0.76
HERPUD1-203ENST00000379792 SH2D1AO60880 128 aa10.32□□□□□ -0.76
HERPUD1-203ENST00000379792 NUTF2P61970 127 aaKnown RBP10.32□□□□□ -0.76
HERPUD1-203ENST00000379792 RNASE7Q9H1E1 156 aaKnown RBP10.32□□□□□ -0.76
HERPUD1-203ENST00000379792 C7orf71A4D174 169 aa10.31□□□□□ -0.76
HERPUD1-203ENST00000379792 K7EIL1 84 aa10.31□□□□□ -0.76
HERPUD1-203ENST00000379792 CA1P00915 261 aaPredicted RBP10.31□□□□□ -0.76
HERPUD1-203ENST00000379792 COX8CQ7Z4L0 72 aa10.31□□□□□ -0.76
HERPUD1-203ENST00000379792 ISOC2Q96AB3 205 aa10.31□□□□□ -0.76
HERPUD1-203ENST00000379792 SMIM12Q96EX1 92 aa10.31□□□□□ -0.76
HERPUD1-203ENST00000379792 CSTL1Q9H114 145 aa10.31□□□□□ -0.76
HERPUD1-203ENST00000379792 RBMY1A1P0DJD3 496 aaKnown RBP10.31□□□□□ -0.76
HERPUD1-203ENST00000379792 RBMY1CP0DJD4 496 aa10.31□□□□□ -0.76
HERPUD1-203ENST00000379792 RBMY1FQ15415 496 aaKnown RBP10.31□□□□□ -0.76
HERPUD1-203ENST00000379792 FAM162BQ5T6X4 162 aa10.31□□□□□ -0.76
HERPUD1-203ENST00000379792 C11orf21Q9P2W6 132 aa10.31□□□□□ -0.76
HERPUD1-203ENST00000379792 FABP5P3A8MUU1 101 aa10.3□□□□□ -0.76
HERPUD1-203ENST00000379792 ERVFC1-1P60608 527 aa10.3□□□□□ -0.76
HERPUD1-203ENST00000379792 MUC21Q5SSG8 566 aa10.3□□□□□ -0.76
HERPUD1-203ENST00000379792 MORN3Q6PF18 240 aaPredicted RBP10.3□□□□□ -0.76
HERPUD1-203ENST00000379792 NUDT10Q8NFP7 164 aa10.3□□□□□ -0.76
HERPUD1-203ENST00000379792 NUDT11Q96G61 164 aa10.3□□□□□ -0.76
HERPUD1-203ENST00000379792 NAGKQ9UJ70 344 aa10.3□□□□□ -0.76
HERPUD1-203ENST00000379792 ZNF324O75467 553 aaPredicted RBP10.29□□□□□ -0.76
HERPUD1-203ENST00000379792 PFN1P07737 140 aaKnown RBP10.29□□□□□ -0.76
HERPUD1-203ENST00000379792 RPL19P84098 196 aaKnown RBP10.29□□□□□ -0.76
HERPUD1-203ENST00000379792 PNRC1Q12796 327 aaPredicted RBP10.29□□□□□ -0.76
HERPUD1-203ENST00000379792 DEFB121Q5J5C9 76 aa10.29□□□□□ -0.76
HERPUD1-203ENST00000379792 CLRN3Q8NCR9 226 aa10.29□□□□□ -0.76
HERPUD1-203ENST00000379792 DAZAP1Q96EP5 407 aaKnown RBP10.29□□□□□ -0.76
HERPUD1-203ENST00000379792 IGHV3OR16-12A0A075B7B8 117 aa10.29□□□□□ -0.76
HERPUD1-203ENST00000379792 TMSB15BA0A087X1C1 80 aa10.29□□□□□ -0.76
HERPUD1-203ENST00000379792 C19orf71A6NCJ1 209 aa10.29□□□□□ -0.76
HERPUD1-203ENST00000379792 INSP01308 110 aa10.29□□□□□ -0.76
HERPUD1-203ENST00000379792 ORM1P02763 201 aa10.29□□□□□ -0.76
HERPUD1-203ENST00000379792 PRM2P04554 102 aa10.29□□□□□ -0.76
HERPUD1-203ENST00000379792 FRMD6-AS1P0C7T7 363 aa10.29□□□□□ -0.76
HERPUD1-203ENST00000379792 Q6AWC8 147 aa10.29□□□□□ -0.76
HERPUD1-203ENST00000379792 SFRP2Q96HF1 295 aa10.29□□□□□ -0.76
HERPUD1-203ENST00000379792 BIN3Q9NQY0 253 aa10.29□□□□□ -0.76
HERPUD1-203ENST00000379792 TRAV21A0A0B4J279 112 aa10.28□□□□□ -0.76
HERPUD1-203ENST00000379792 AMBPP02760 352 aa10.28□□□□□ -0.76
HERPUD1-203ENST00000379792 HTN1P15515 57 aa10.28□□□□□ -0.76
HERPUD1-203ENST00000379792 S100A1P23297 94 aa10.28□□□□□ -0.76
HERPUD1-203ENST00000379792 IBA57Q5T440 356 aaKnown RBP10.28□□□□□ -0.76
HERPUD1-203ENST00000379792 ATRAIDQ6UW56 229 aa10.28□□□□□ -0.76
HERPUD1-203ENST00000379792 C1orf158Q8N1D5 194 aa10.28□□□□□ -0.76
HERPUD1-203ENST00000379792 SVBPQ8N300 66 aa10.28□□□□□ -0.76
HERPUD1-203ENST00000379792 P01737 135 aa10.27□□□□□ -0.77
HERPUD1-203ENST00000379792 APOC4P55056 127 aa10.27□□□□□ -0.77
HERPUD1-203ENST00000379792 RNF212Q495C1 297 aa10.27□□□□□ -0.77
HERPUD1-203ENST00000379792 CSNK1G2-AS1Q8NCQ2 148 aa10.27□□□□□ -0.77
HERPUD1-203ENST00000379792 OR10G8Q8NGN5 311 aa10.27□□□□□ -0.77
HERPUD1-203ENST00000379792 IGKV3D-20A0A0C4DH25 116 aa10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 KIR2DL5BA0A0G2JN68 375 aa10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 KIR2DL5BA0A0G2JPC4 375 aa10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 C7orf77A4D0Y5 90 aa10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 A8MZ25 164 aa10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 GATCO43716 136 aaKnown RBP10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 KIR2DL5AQ8N109 375 aa10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 OR2D3Q8NGH3 330 aa10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 KIR2DL5BQ8NHK3 375 aa10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 LINC01587Q99440 93 aa10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 TMEM208Q9BTX3 173 aa10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 C1QTNF4Q9BXJ3 329 aa10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 TMEM189A5PLL7 270 aa10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 ZNF705GA8MUZ8 300 aaPredicted RBP10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 SNAPINO95295 136 aa10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 GZMBP10144 247 aa10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 DEFB135Q30KP9 77 aa10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 ANXA2RQ3ZCQ2 193 aa10.26□□□□□ -0.77
HERPUD1-203ENST00000379792 FAM231DQ6ZW35 169 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms