RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 Q8N1Y9 231 aa8.64□□□□□ -1.03
USP6NL-202ENST00000379237 THAP8Q8NA92 274 aa8.64□□□□□ -1.03
USP6NL-202ENST00000379237 ZNF71Q9NQZ8 489 aaPredicted RBP8.64□□□□□ -1.03
USP6NL-202ENST00000379237 EGR2P11161 476 aaPredicted RBP8.64□□□□□ -1.03
USP6NL-202ENST00000379237 IGHV1-2P23083 117 aa8.64□□□□□ -1.03
USP6NL-202ENST00000379237 DIAPH2-AS1Q14236 149 aa8.64□□□□□ -1.03
USP6NL-202ENST00000379237 POU2AF1Q16633 256 aa8.64□□□□□ -1.03
USP6NL-202ENST00000379237 Q6ZQT7 251 aa8.64□□□□□ -1.03
USP6NL-202ENST00000379237 PHLDA3Q9Y5J5 127 aa8.64□□□□□ -1.03
USP6NL-202ENST00000379237 ZNF493Q6ZR52 646 aa8.64□□□□□ -1.03
USP6NL-202ENST00000379237 CARD19Q96LW7 228 aa8.64□□□□□ -1.03
USP6NL-202ENST00000379237 PRO0461Q9UI25 63 aa8.64□□□□□ -1.03
USP6NL-202ENST00000379237 IGHV3OR16-13A0A075B7E8 117 aa8.64□□□□□ -1.03
USP6NL-202ENST00000379237 IGHV3-74A0A0B4J1X5 117 aa8.64□□□□□ -1.03
USP6NL-202ENST00000379237 CR1LQ2VPA4 569 aa8.64□□□□□ -1.03
USP6NL-202ENST00000379237 GFRALQ6UXV0 394 aa8.64□□□□□ -1.03
USP6NL-202ENST00000379237 PAPPA-AS1Q5QFB9 102 aa8.63□□□□□ -1.03
USP6NL-202ENST00000379237 IL17RELQ6ZVW7 336 aa8.63□□□□□ -1.03
USP6NL-202ENST00000379237 TRAV8-3A0A0A6YYJ7 113 aa8.63□□□□□ -1.03
USP6NL-202ENST00000379237 TEX49A0A1B0GTD5 131 aa8.63□□□□□ -1.03
USP6NL-202ENST00000379237 WI2-2373I1.2A0A1W2PRP0 233 aa8.63□□□□□ -1.03
USP6NL-202ENST00000379237 E7EUB6 86 aa8.63□□□□□ -1.03
USP6NL-202ENST00000379237 UTF1Q5T230 341 aa8.63□□□□□ -1.03
USP6NL-202ENST00000379237 IGHV3-23P01764 117 aa8.63□□□□□ -1.03
USP6NL-202ENST00000379237 CD7P09564 240 aa8.63□□□□□ -1.03
USP6NL-202ENST00000379237 LTBRP36941 435 aa8.63□□□□□ -1.03
USP6NL-202ENST00000379237 MFAP4P55083 255 aa8.63□□□□□ -1.03
USP6NL-202ENST00000379237 NDUFA11Q86Y39 141 aa8.63□□□□□ -1.03
USP6NL-202ENST00000379237 C11orf53Q8IXP5 236 aa8.63□□□□□ -1.03
USP6NL-202ENST00000379237 AJUBAQ96IF1 538 aa8.63□□□□□ -1.03
USP6NL-202ENST00000379237 CENPVL3A0A0U1RRI6 287 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 PRB3Q04118 309 aaPredicted RBP8.62□□□□□ -1.03
USP6NL-202ENST00000379237 C17orf58Q2M2W7 97 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 MORN3Q6PF18 240 aaPredicted RBP8.62□□□□□ -1.03
USP6NL-202ENST00000379237 LAMA1P25391 3075 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 DKK1O94907 266 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 CFC1BP0CG36 223 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 CFC1P0CG37 223 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 NPC2P61916 151 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 C2orf66Q6UXQ4 117 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 LYPD1Q8N2G4 141 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 MED13LQ71F56 2210 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 CRLF1O75462 422 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 MYCNOSP40205 109 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 DUX4L9Q6RFH8 374 aaPredicted RBP8.62□□□□□ -1.03
USP6NL-202ENST00000379237 C1orf229Q6ZS94 237 aaPredicted RBP8.62□□□□□ -1.03
USP6NL-202ENST00000379237 PRR25Q96S07 402 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 NPFFO15130 113 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 LINC00694P0DN24 101 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 SMCPP49901 116 aaPredicted RBP8.62□□□□□ -1.03
USP6NL-202ENST00000379237 PIP4P2Q8N4L2 257 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 DUX3Q96PT4 197 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 TPSG1Q9NRR2 321 aa8.62□□□□□ -1.03
USP6NL-202ENST00000379237 IGKV1D-37A0A075B6S9 117 aa8.61□□□□□ -1.03
USP6NL-202ENST00000379237 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.61□□□□□ -1.03
USP6NL-202ENST00000379237 C16orf97H3BN30 126 aa8.61□□□□□ -1.03
USP6NL-202ENST00000379237 SHANK2-AS3Q9BTD1 123 aa8.61□□□□□ -1.03
USP6NL-202ENST00000379237 TRBV7-3A0A075B6L6 115 aa8.61□□□□□ -1.03
USP6NL-202ENST00000379237 LINC01620Q4KN68 170 aa8.61□□□□□ -1.03
USP6NL-202ENST00000379237 Q71RC1 249 aaPredicted RBP8.61□□□□□ -1.03
USP6NL-202ENST00000379237 FAM90A1Q86YD7 464 aa8.61□□□□□ -1.03
USP6NL-202ENST00000379237 MED13Q9UHV7 2174 aa8.61□□□□□ -1.03
USP6NL-202ENST00000379237 NOTCH2Q04721 2471 aa8.61□□□□□ -1.03
USP6NL-202ENST00000379237 IGHV3-66A0A0C4DH42 116 aa8.61□□□□□ -1.03
USP6NL-202ENST00000379237 CEACAM4O75871 244 aa8.61□□□□□ -1.03
USP6NL-202ENST00000379237 Q6ZS92 163 aa8.61□□□□□ -1.03
USP6NL-202ENST00000379237 NCKAP5O14513 1909 aa8.61□□□□□ -1.03
USP6NL-202ENST00000379237 SRD5A1P18405 259 aa8.61□□□□□ -1.03
USP6NL-202ENST00000379237 PLEKHB2Q96CS7 222 aa8.61□□□□□ -1.03
USP6NL-202ENST00000379237 VPS13AQ96RL7 3174 aa8.61□□□□□ -1.03
USP6NL-202ENST00000379237 TM4SF5O14894 197 aa8.6□□□□□ -1.03
USP6NL-202ENST00000379237 C21orf62Q9NYP8 219 aa8.6□□□□□ -1.03
USP6NL-202ENST00000379237 FRYLO94915 3013 aa8.6□□□□□ -1.03
USP6NL-202ENST00000379237 SS18L1O75177 396 aaPredicted RBP8.6□□□□□ -1.03
USP6NL-202ENST00000379237 CD3EP07766 207 aa8.6□□□□□ -1.03
USP6NL-202ENST00000379237 TRGV11A0A075B6L2 103 aa8.6□□□□□ -1.03
USP6NL-202ENST00000379237 A4D1N5 150 aa8.6□□□□□ -1.03
USP6NL-202ENST00000379237 ERCC8Q13216 396 aa8.6□□□□□ -1.03
USP6NL-202ENST00000379237 TMEM14CQ9P0S9 112 aa8.6□□□□□ -1.03
USP6NL-202ENST00000379237 TMEM30BQ3MIR4 351 aa8.59□□□□□ -1.03
USP6NL-202ENST00000379237 PMS2CLQ68D20 193 aa8.59□□□□□ -1.03
USP6NL-202ENST00000379237 PVRIGQ6DKI7 326 aa8.59□□□□□ -1.03
USP6NL-202ENST00000379237 PIFOQ8TCI5 191 aa8.59□□□□□ -1.03
USP6NL-202ENST00000379237 TET2Q6N021 2002 aaPredicted RBP8.59□□□□□ -1.03
USP6NL-202ENST00000379237 IGHV3-49A0A0A0MS15 119 aa8.59□□□□□ -1.03
USP6NL-202ENST00000379237 FHL3Q13643 280 aa8.59□□□□□ -1.03
USP6NL-202ENST00000379237 M0R2P5 195 aa8.59□□□□□ -1.03
USP6NL-202ENST00000379237 IGLV3-19P01714 112 aa8.59□□□□□ -1.03
USP6NL-202ENST00000379237 LOC107984640A0A0U1RRK4 108 aa8.59□□□□□ -1.04
USP6NL-202ENST00000379237 CRIP1P50238 77 aa8.59□□□□□ -1.04
USP6NL-202ENST00000379237 SIGLEC15Q6ZMC9 328 aa8.59□□□□□ -1.04
USP6NL-202ENST00000379237 Q6ZT83 130 aa8.59□□□□□ -1.04
USP6NL-202ENST00000379237 SMIM2Q9BVW6 85 aa8.59□□□□□ -1.04
USP6NL-202ENST00000379237 EXPH5Q8NEV8 1989 aa8.58□□□□□ -1.04
USP6NL-202ENST00000379237 SMIM9A6NGZ8 99 aa8.58□□□□□ -1.04
USP6NL-202ENST00000379237 LINC01548A6NM66 108 aa8.58□□□□□ -1.04
USP6NL-202ENST00000379237 GAS8-AS1O95177 125 aa8.58□□□□□ -1.04
USP6NL-202ENST00000379237 CSDC2Q9Y534 153 aaKnown RBP8.58□□□□□ -1.04
USP6NL-202ENST00000379237 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.58□□□□□ -1.042e-6■■■■■ 26.8
USP6NL-202ENST00000379237 COL6A3P12111 3177 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms