RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 ASH1LQ9NR48 2969 aaKnown RBP12.9□□□□□ -0.34
PCDHA1-201ENST00000378133 NPIPB5A8MRT5 1133 aa12.9□□□□□ -0.35
PCDHA1-201ENST00000378133 F8W1H4 67 aa12.9□□□□□ -0.35
PCDHA1-201ENST00000378133 GATA3P23771 443 aa12.9□□□□□ -0.35
PCDHA1-201ENST00000378133 TM2D2Q9BX73 214 aa12.9□□□□□ -0.35
PCDHA1-201ENST00000378133 MSRB1Q9NZV6 116 aa12.9□□□□□ -0.35
PCDHA1-201ENST00000378133 J3QR89 54 aa12.89□□□□□ -0.35
PCDHA1-201ENST00000378133 PDE6HQ13956 83 aa12.89□□□□□ -0.35
PCDHA1-201ENST00000378133 CDSNQ15517 529 aa12.89□□□□□ -0.35
PCDHA1-201ENST00000378133 CACNA1BQ00975 2339 aa12.89□□□□□ -0.35
PCDHA1-201ENST00000378133 GAS8-AS1O95177 125 aa12.89□□□□□ -0.35
PCDHA1-201ENST00000378133 EVI2AP22794 236 aa12.89□□□□□ -0.35
PCDHA1-201ENST00000378133 ZC2HC1BQ5TFG8 222 aa12.89□□□□□ -0.35
PCDHA1-201ENST00000378133 FOXI2Q6ZQN5 318 aa12.89□□□□□ -0.35
PCDHA1-201ENST00000378133 DYNAPQ8N1N2 210 aa12.89□□□□□ -0.35
PCDHA1-201ENST00000378133 PIEZO1Q92508 2521 aa12.89□□□□□ -0.35
PCDHA1-201ENST00000378133 ARPC1AQ92747 370 aa12.89□□□□□ -0.35
PCDHA1-201ENST00000378133 PRR25Q96S07 402 aa12.89□□□□□ -0.35
PCDHA1-201ENST00000378133 FOXC2Q99958 501 aa12.89□□□□□ -0.35
PCDHA1-201ENST00000378133 SPANXB1Q9NS25 103 aaPredicted RBP12.89□□□□□ -0.35
PCDHA1-201ENST00000378133 C21orf62Q9NYP8 219 aa12.89□□□□□ -0.35
PCDHA1-201ENST00000378133 SS18L2Q9UHA2 77 aa12.89□□□□□ -0.35
PCDHA1-201ENST00000378133 E9PLD3 99 aa12.88□□□□□ -0.35
PCDHA1-201ENST00000378133 TCTEX1D4Q5JR98 221 aa12.88□□□□□ -0.35
PCDHA1-201ENST00000378133 IGFL4Q6B9Z1 124 aa12.88□□□□□ -0.35
PCDHA1-201ENST00000378133 RNF185Q96GF1 192 aa12.88□□□□□ -0.35
PCDHA1-201ENST00000378133 NCOR2Q9Y618 2525 aa12.88□□□□□ -0.35
PCDHA1-201ENST00000378133 ODF3BA8MYP8 253 aa12.88□□□□□ -0.35
PCDHA1-201ENST00000378133 IGLL5B9A064 214 aa12.88□□□□□ -0.35
PCDHA1-201ENST00000378133 CCL21O00585 134 aa12.88□□□□□ -0.35
PCDHA1-201ENST00000378133 PRTN3P24158 256 aa12.88□□□□□ -0.35
PCDHA1-201ENST00000378133 TIMD4Q96H15 378 aa12.88□□□□□ -0.35
PCDHA1-201ENST00000378133 IGHV3OR16-8A0A075B7F1 116 aa12.87□□□□□ -0.35
PCDHA1-201ENST00000378133 DPM2O94777 84 aa12.87□□□□□ -0.35
PCDHA1-201ENST00000378133 ZNF80P51504 273 aaPredicted RBP12.87□□□□□ -0.35
PCDHA1-201ENST00000378133 NXT2Q9NPJ8 142 aaKnown RBP12.87□□□□□ -0.35
PCDHA1-201ENST00000378133 HRNRQ86YZ3 2850 aaPredicted RBP12.87□□□□□ -0.35
PCDHA1-201ENST00000378133 TMEM8BA6NDV4 472 aa12.87□□□□□ -0.35
PCDHA1-201ENST00000378133 TNFRSF6BO95407 300 aa12.87□□□□□ -0.35
PCDHA1-201ENST00000378133 IGLC6P0CF74 106 aa12.87□□□□□ -0.35
PCDHA1-201ENST00000378133 Q8TAT8 98 aa12.87□□□□□ -0.35
PCDHA1-201ENST00000378133 MRAP2Q96G30 205 aa12.87□□□□□ -0.35
PCDHA1-201ENST00000378133 IGHV3-35A0A0C4DH35 117 aa12.86□□□□□ -0.35
PCDHA1-201ENST00000378133 LINC01546A6NGU7 62 aa12.86□□□□□ -0.35
PCDHA1-201ENST00000378133 H3BMG7 143 aa12.86□□□□□ -0.35
PCDHA1-201ENST00000378133 SH2D6Q7Z4S9 175 aa12.86□□□□□ -0.35
PCDHA1-201ENST00000378133 TTC9CQ8N5M4 171 aa12.86□□□□□ -0.35
PCDHA1-201ENST00000378133 TMEM160Q9NX00 188 aa12.86□□□□□ -0.35
PCDHA1-201ENST00000378133 M0R1W7 72 aa12.86□□□□□ -0.35
PCDHA1-201ENST00000378133 ORM1P02763 201 aa12.86□□□□□ -0.35
PCDHA1-201ENST00000378133 COX8CQ7Z4L0 72 aa12.86□□□□□ -0.35
PCDHA1-201ENST00000378133 TMEM158Q8WZ71 300 aa12.86□□□□□ -0.35
PCDHA1-201ENST00000378133 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.85□□□□□ -0.35
PCDHA1-201ENST00000378133 HLA-DMBP28068 263 aa12.85□□□□□ -0.35
PCDHA1-201ENST00000378133 SRSF1Q07955 248 aaKnown RBP eCLIP12.85□□□□□ -0.35
PCDHA1-201ENST00000378133 ETDBQ3ZM63 59 aa12.85□□□□□ -0.35
PCDHA1-201ENST00000378133 FBXL19-AS1Q494R0 122 aa12.85□□□□□ -0.35
PCDHA1-201ENST00000378133 TRAV40A0A0B4J280 105 aa12.85□□□□□ -0.35
PCDHA1-201ENST00000378133 ATP5LO75964 103 aa12.85□□□□□ -0.35
PCDHA1-201ENST00000378133 TSPAN13O95857 204 aa12.85□□□□□ -0.35
PCDHA1-201ENST00000378133 RPL7P18124 248 aaKnown RBP12.85□□□□□ -0.35
PCDHA1-201ENST00000378133 CHD8Q9HCK8 2581 aa12.85□□□□□ -0.35
PCDHA1-201ENST00000378133 CTSGP08311 255 aa12.84□□□□□ -0.35
PCDHA1-201ENST00000378133 GATA1P15976 413 aaPredicted RBP12.84□□□□□ -0.35
PCDHA1-201ENST00000378133 VMO1Q7Z5L0 202 aa12.84□□□□□ -0.35
PCDHA1-201ENST00000378133 ZNF575Q86XF7 245 aa12.84□□□□□ -0.35
PCDHA1-201ENST00000378133 SPAG8Q99932 426 aaPredicted RBP12.84□□□□□ -0.35
PCDHA1-201ENST00000378133 SMAD5-AS1Q9Y6J3 95 aa12.84□□□□□ -0.35
PCDHA1-201ENST00000378133 ATRXP46100 2492 aa12.84□□□□□ -0.35
PCDHA1-201ENST00000378133 C12orf74Q32Q52 190 aa12.84□□□□□ -0.35
PCDHA1-201ENST00000378133 SPATA25Q9BR10 227 aa12.84□□□□□ -0.35
PCDHA1-201ENST00000378133 SPTBN1Q01082 2364 aaKnown RBP12.84□□□□□ -0.35
PCDHA1-201ENST00000378133 MAPKAPK5-AS1Q8N8E1 139 aa12.83□□□□□ -0.35
PCDHA1-201ENST00000378133 LINC01559Q495D7 138 aa12.83□□□□□ -0.36
PCDHA1-201ENST00000378133 AMTNQ6UX39 209 aa12.83□□□□□ -0.36
PCDHA1-201ENST00000378133 MRPL35Q9NZE8 188 aaKnown RBP12.82□□□□□ -0.36
PCDHA1-201ENST00000378133 AGRNO00468 2067 aa12.82□□□□□ -0.36
PCDHA1-201ENST00000378133 IGHG4P01861 327 aa12.82□□□□□ -0.36
PCDHA1-201ENST00000378133 ATP5G2Q06055 141 aa12.82□□□□□ -0.36
PCDHA1-201ENST00000378133 CACNA1AO00555 2505 aa12.82□□□□□ -0.36
PCDHA1-201ENST00000378133 HLA-DRB4P13762 266 aa12.82□□□□□ -0.36
PCDHA1-201ENST00000378133 HERV-K104P63124 156 aa12.82□□□□□ -0.36
PCDHA1-201ENST00000378133 GAGE13Q4V321 117 aa12.82□□□□□ -0.36
PCDHA1-201ENST00000378133 HIST1H4GQ99525 98 aa12.82□□□□□ -0.36
PCDHA1-201ENST00000378133 HLA-DRB4X5D2U9 266 aa12.82□□□□□ -0.36
PCDHA1-201ENST00000378133 COL6A6A6NMZ7 2263 aa12.81□□□□□ -0.36
PCDHA1-201ENST00000378133 PPIFP30405 207 aaKnown RBP12.81□□□□□ -0.36
PCDHA1-201ENST00000378133 MTURNQ8N3F0 131 aa12.81□□□□□ -0.36
PCDHA1-201ENST00000378133 Q8N6K4 173 aa12.81□□□□□ -0.36
PCDHA1-201ENST00000378133 CNFNQ9BYD5 112 aa12.81□□□□□ -0.36
PCDHA1-201ENST00000378133 IGHV7-81A0A0B4J1V7 117 aa12.81□□□□□ -0.36
PCDHA1-201ENST00000378133 FABP5P3A8MUU1 101 aa12.81□□□□□ -0.36
PCDHA1-201ENST00000378133 ZFP36P26651 326 aaKnown RBP12.81□□□□□ -0.36
PCDHA1-201ENST00000378133 TAL2Q16559 108 aa12.81□□□□□ -0.36
PCDHA1-201ENST00000378133 Q8N8P6 123 aa12.81□□□□□ -0.36
PCDHA1-201ENST00000378133 MYOZ3Q8TDC0 251 aa12.81□□□□□ -0.36
PCDHA1-201ENST00000378133 ADORA2A-AS1P86434 159 aa12.8□□□□□ -0.36
PCDHA1-201ENST00000378133 DTX2Q86UW9 622 aa12.8□□□□□ -0.36
PCDHA1-201ENST00000378133 C11orf71Q6IPW1 123 aa12.8□□□□□ -0.36
PCDHA1-201ENST00000378133 PRORYQ9H606 182 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms