RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 KIR3DS1Q14943 382 aa15.64■□□□□ 0.1
CLN5-201ENST00000377453 FAM110DQ8TAY7 271 aaPredicted RBP15.64■□□□□ 0.1
CLN5-201ENST00000377453 TMEM158Q8WZ71 300 aa15.64■□□□□ 0.1
CLN5-201ENST00000377453 PEF1Q9UBV8 284 aaKnown RBP15.64■□□□□ 0.09
CLN5-201ENST00000377453 GAGE12BA1L429 117 aa15.64■□□□□ 0.09
CLN5-201ENST00000377453 PRSS1P07477 247 aa15.64■□□□□ 0.09
CLN5-201ENST00000377453 MINOS1Q5TGZ0 78 aa15.64■□□□□ 0.09
CLN5-201ENST00000377453 MINOS1-NBL1R4GNA1 71 aa15.64■□□□□ 0.09
CLN5-201ENST00000377453 ADAMTSL5Q6ZMM2 481 aa15.63■□□□□ 0.09
CLN5-201ENST00000377453 CDKN1BP46527 198 aa15.63■□□□□ 0.09
CLN5-201ENST00000377453 LY6DQ14210 128 aa15.63■□□□□ 0.09
CLN5-201ENST00000377453 OCIAD2Q56VL3 154 aa15.63■□□□□ 0.09
CLN5-201ENST00000377453 GTSCR1Q86UQ5 136 aa15.63■□□□□ 0.09
CLN5-201ENST00000377453 FOXC2Q99958 501 aa15.63■□□□□ 0.09
CLN5-201ENST00000377453 SAP30O75446 220 aa15.62■□□□□ 0.09
CLN5-201ENST00000377453 PRR9Q5T870 116 aa15.62■□□□□ 0.09
CLN5-201ENST00000377453 BPESC1Q9GZL8 116 aa15.62■□□□□ 0.09
CLN5-201ENST00000377453 ODF1Q14990 250 aa15.62■□□□□ 0.09
CLN5-201ENST00000377453 LINC01559Q495D7 138 aa15.62■□□□□ 0.09
CLN5-201ENST00000377453 GOSR1O95249 250 aa15.61■□□□□ 0.09
CLN5-201ENST00000377453 C8orf86Q6ZUL3 223 aa15.61■□□□□ 0.09
CLN5-201ENST00000377453 PKD1L2Q7Z442 2459 aa15.61■□□□□ 0.09
CLN5-201ENST00000377453 GAGE10A6NGK3 116 aa15.61■□□□□ 0.09
CLN5-201ENST00000377453 OR1N2Q8NGR9 330 aa15.61■□□□□ 0.09
CLN5-201ENST00000377453 SCGB2A1O75556 95 aa15.6■□□□□ 0.09
CLN5-201ENST00000377453 SEC11AP67812 179 aa15.6■□□□□ 0.09
CLN5-201ENST00000377453 TMEM190Q8WZ59 177 aa15.6■□□□□ 0.09
CLN5-201ENST00000377453 CNFNQ9BYD5 112 aa15.6■□□□□ 0.09
CLN5-201ENST00000377453 IGHV7-4-1A0A0J9YVY3 117 aa15.59■□□□□ 0.09
CLN5-201ENST00000377453 OOSP1A8MZH6 123 aa15.59■□□□□ 0.09
CLN5-201ENST00000377453 TRBV12-3P01733 135 aa15.59■□□□□ 0.09
CLN5-201ENST00000377453 FCER1GP30273 86 aa15.59■□□□□ 0.09
CLN5-201ENST00000377453 C1orf122Q6ZSJ8 110 aa15.59■□□□□ 0.09
CLN5-201ENST00000377453 C20orf173Q96LM9 149 aa15.59■□□□□ 0.09
CLN5-201ENST00000377453 VPS25Q9BRG1 176 aa15.59■□□□□ 0.09
CLN5-201ENST00000377453 IGKV3-7A0A075B6H7 116 aa15.59■□□□□ 0.09
CLN5-201ENST00000377453 H3BVH4 76 aa15.59■□□□□ 0.09
CLN5-201ENST00000377453 K7ERJ3 54 aa15.59■□□□□ 0.09
CLN5-201ENST00000377453 HHLA3Q9XRX5 114 aa15.59■□□□□ 0.09
CLN5-201ENST00000377453 EFNA4P52798 201 aa15.58■□□□□ 0.08
CLN5-201ENST00000377453 HSD52Q0P140 79 aa15.58■□□□□ 0.08
CLN5-201ENST00000377453 C9orf118A6NHY6 69 aa15.58■□□□□ 0.08
CLN5-201ENST00000377453 GCSHP23434 173 aa15.58■□□□□ 0.08
CLN5-201ENST00000377453 UBE2E1P51965 193 aa15.58■□□□□ 0.08
CLN5-201ENST00000377453 KLRB1Q12918 225 aa15.58■□□□□ 0.08
CLN5-201ENST00000377453 TMEM78Q5T7P6 136 aa15.58■□□□□ 0.08
CLN5-201ENST00000377453 OR2K2Q8NGT1 345 aa15.58■□□□□ 0.08
CLN5-201ENST00000377453 DEFB104AQ8WTQ1 72 aa15.58■□□□□ 0.08
CLN5-201ENST00000377453 DPF1Q92782 380 aa15.58■□□□□ 0.08
CLN5-201ENST00000377453 TMEM160Q9NX00 188 aa15.58■□□□□ 0.08
CLN5-201ENST00000377453 CENPVL3A0A0U1RRI6 287 aa15.57■□□□□ 0.08
CLN5-201ENST00000377453 FXYD2P54710 66 aa15.57■□□□□ 0.08
CLN5-201ENST00000377453 BRD3OSQ6XYD6 125 aa15.57■□□□□ 0.08
CLN5-201ENST00000377453 AP1S3Q96PC3 154 aa15.57■□□□□ 0.08
CLN5-201ENST00000377453 A0A0G2JLM5 398 aa15.57■□□□□ 0.08
CLN5-201ENST00000377453 IGLV2-18A0A075B6J9 118 aa15.56■□□□□ 0.08
CLN5-201ENST00000377453 METTL26Q96S19 204 aa15.56■□□□□ 0.08
CLN5-201ENST00000377453 KLK15Q9H2R5 256 aa15.56■□□□□ 0.08
CLN5-201ENST00000377453 TRAV40A0A0B4J280 105 aa15.56■□□□□ 0.08
CLN5-201ENST00000377453 TMEM8BA6NDV4 472 aa15.56■□□□□ 0.08
CLN5-201ENST00000377453 H3BRM9 83 aa15.56■□□□□ 0.08
CLN5-201ENST00000377453 UNQ9165/PRO28630Q6UXU0 137 aa15.56■□□□□ 0.08
CLN5-201ENST00000377453 LCNL1Q6ZST4 164 aa15.56■□□□□ 0.08
CLN5-201ENST00000377453 A6NDN8 102 aa15.55■□□□□ 0.08
CLN5-201ENST00000377453 SMIM17P0DL12 118 aa15.55■□□□□ 0.08
CLN5-201ENST00000377453 S100A7P31151 101 aa15.55■□□□□ 0.08
CLN5-201ENST00000377453 LMO4P61968 165 aa15.55■□□□□ 0.08
CLN5-201ENST00000377453 ZC2HC1BQ5TFG8 222 aa15.55■□□□□ 0.08
CLN5-201ENST00000377453 EEF1AKMT3Q96AZ1 226 aa15.55■□□□□ 0.08
CLN5-201ENST00000377453 PPBPP02775 128 aa15.55■□□□□ 0.08
CLN5-201ENST00000377453 SPANXN1Q5VSR9 72 aa15.55■□□□□ 0.08
CLN5-201ENST00000377453 ARL6IP6Q8N6S5 226 aa15.55■□□□□ 0.08
CLN5-201ENST00000377453 NRACQ8N912 160 aa15.55■□□□□ 0.08
CLN5-201ENST00000377453 OR9G4Q8NGQ1 327 aa15.55■□□□□ 0.08
CLN5-201ENST00000377453 C16orf92Q96LL3 132 aa15.55■□□□□ 0.08
CLN5-201ENST00000377453 SLC50A1Q9BRV3 221 aa15.55■□□□□ 0.08
CLN5-201ENST00000377453 NXT2Q9NPJ8 142 aaKnown RBP15.55■□□□□ 0.08
CLN5-201ENST00000377453 MRPL35Q9NZE8 188 aaKnown RBP15.55■□□□□ 0.08
CLN5-201ENST00000377453 NPFFO15130 113 aa15.54■□□□□ 0.08
CLN5-201ENST00000377453 UFSP1Q6NVU6 142 aa15.54■□□□□ 0.08
CLN5-201ENST00000377453 IGKCP01834 107 aa15.54■□□□□ 0.08
CLN5-201ENST00000377453 C5orf56Q8N8D9 126 aa15.54■□□□□ 0.08
CLN5-201ENST00000377453 GLMPQ8WWB7 406 aa15.54■□□□□ 0.08
CLN5-201ENST00000377453 CFAP46Q8IYW2 2715 aa15.54■□□□□ 0.08
CLN5-201ENST00000377453 IGHV3-11P01762 117 aa15.53■□□□□ 0.08
CLN5-201ENST00000377453 SRSF2Q01130 221 aaKnown RBP15.53■□□□□ 0.08
CLN5-201ENST00000377453 ABCA2Q9BZC7 2435 aa15.53■□□□□ 0.08
CLN5-201ENST00000377453 F6UB75 175 aa15.53■□□□□ 0.08
CLN5-201ENST00000377453 C19orf84I3L1E1 186 aa15.53■□□□□ 0.08
CLN5-201ENST00000377453 M0R381 172 aa15.53■□□□□ 0.08
CLN5-201ENST00000377453 MAPKAPK5-AS1Q8N8E1 139 aa15.53■□□□□ 0.08
CLN5-201ENST00000377453 Q8N8P6 123 aa15.53■□□□□ 0.08
CLN5-201ENST00000377453 ATP5G2Q06055 141 aa15.52■□□□□ 0.07
CLN5-201ENST00000377453 LY6EQ16553 131 aa15.52■□□□□ 0.07
CLN5-201ENST00000377453 OR4X2Q8NGF9 303 aa15.52■□□□□ 0.07
CLN5-201ENST00000377453 RBAKDNA6NC62 111 aa15.51■□□□□ 0.07
CLN5-201ENST00000377453 CHAC1Q9BUX1 264 aa15.51■□□□□ 0.07
CLN5-201ENST00000377453 ZMAT4Q9H898 229 aa15.51■□□□□ 0.07
CLN5-201ENST00000377453 LINC01546A6NGU7 62 aa15.51■□□□□ 0.07
CLN5-201ENST00000377453 MEGF9Q9H1U4 602 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms