RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 NDUFA11Q86Y39 141 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 OR2D3Q8NGH3 330 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 ST20Q9HBF5 79 aa9.51□□□□□ -0.89
VRK3-202ENST00000377011 LOC102724200A0A096LPH7 203 aaPredicted RBP9.5□□□□□ -0.89
VRK3-202ENST00000377011 WI2-2373I1.2A0A1W2PRP0 233 aa9.5□□□□□ -0.89
VRK3-202ENST00000377011 FBLL1A6NHQ2 334 aaKnown RBP9.5□□□□□ -0.89
VRK3-202ENST00000377011 NPIPB5A8MRT5 1133 aa9.5□□□□□ -0.89
VRK3-202ENST00000377011 CNIH1O95406 144 aa9.5□□□□□ -0.89
VRK3-202ENST00000377011 KLK15Q9H2R5 256 aa9.5□□□□□ -0.89
VRK3-202ENST00000377011 IGHV3-21A0A0B4J1V1 117 aa9.49□□□□□ -0.89
VRK3-202ENST00000377011 CHEK1O14757 476 aa9.49□□□□□ -0.89
VRK3-202ENST00000377011 WIPF1O43516 503 aa9.49□□□□□ -0.89
VRK3-202ENST00000377011 SCGB2A1O75556 95 aa9.49□□□□□ -0.89
VRK3-202ENST00000377011 HLA-DRB1P01911 266 aa9.49□□□□□ -0.89
VRK3-202ENST00000377011 APOHP02749 345 aaPredicted RBP9.49□□□□□ -0.89
VRK3-202ENST00000377011 PRB2P02812 416 aaPredicted RBP9.49□□□□□ -0.89
VRK3-202ENST00000377011 RIGQ13278 110 aa9.49□□□□□ -0.89
VRK3-202ENST00000377011 KHDC1LQ5JSQ8 128 aa9.49□□□□□ -0.89
VRK3-202ENST00000377011 LEMD1Q68G75 181 aa9.49□□□□□ -0.89
VRK3-202ENST00000377011 SIGLEC15Q6ZMC9 328 aa9.49□□□□□ -0.89
VRK3-202ENST00000377011 STPG4Q8N801 248 aa9.49□□□□□ -0.89
VRK3-202ENST00000377011 RNF125Q96EQ8 232 aa9.49□□□□□ -0.89
VRK3-202ENST00000377011 PGLYRP4Q96LB8 373 aa9.49□□□□□ -0.89
VRK3-202ENST00000377011 SSBP4Q9BWG4 385 aaPredicted RBP9.49□□□□□ -0.89
VRK3-202ENST00000377011 MRPS12O15235 138 aaKnown RBP9.48□□□□□ -0.89
VRK3-202ENST00000377011 APELAP0DMC3 54 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 S100A7P31151 101 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 OXLD1Q5BKU9 147 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 C8orf86Q6ZUL3 223 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 GOLT1AQ6ZVE7 132 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 ZNF491Q8N8L2 437 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.48□□□□□ -0.89
VRK3-202ENST00000377011 A0A1B0GUT8 65 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 NDUFB8O95169 186 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 PPIFP30405 207 aaKnown RBP9.48□□□□□ -0.89
VRK3-202ENST00000377011 PSG3Q16557 428 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 DEFB136Q30KP8 78 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 Q56UQ5 140 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 C19orf54Q5BKX5 351 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 PET117Q6UWS5 81 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 COX8CQ7Z4L0 72 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 PRNTQ86SH4 94 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 ZNF738Q8NE65 137 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 URB1-AS1Q96HZ7 61 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 SGK494Q96LW2 274 aa9.48□□□□□ -0.89
VRK3-202ENST00000377011 TSSC4Q9Y5U2 329 aaPredicted RBP9.48□□□□□ -0.89
VRK3-202ENST00000377011 IGLV11-55A0A075B6I3 123 aa9.47□□□□□ -0.89
VRK3-202ENST00000377011 IGF1P05019 195 aa9.47□□□□□ -0.89
VRK3-202ENST00000377011 IGLL1P15814 213 aa9.47□□□□□ -0.89
VRK3-202ENST00000377011 TFPI2P48307 235 aa9.47□□□□□ -0.89
VRK3-202ENST00000377011 MFAP4P55083 255 aa9.47□□□□□ -0.89
VRK3-202ENST00000377011 ASPHD1Q5U4P2 390 aa9.47□□□□□ -0.89
VRK3-202ENST00000377011 LCN12Q6JVE5 192 aa9.47□□□□□ -0.89
VRK3-202ENST00000377011 EXOC3-AS1Q8N2X6 119 aa9.47□□□□□ -0.89
VRK3-202ENST00000377011 OR4X2Q8NGF9 303 aa9.47□□□□□ -0.89
VRK3-202ENST00000377011 ZNF414Q96IQ9 312 aa9.47□□□□□ -0.89
VRK3-202ENST00000377011 TMEM191AQ9H0A3 160 aa9.47□□□□□ -0.89
VRK3-202ENST00000377011 PSG8Q9UQ74 426 aa9.47□□□□□ -0.89
VRK3-202ENST00000377011 DNAH9Q9NYC9 4486 aa9.47□□□□□ -0.89
VRK3-202ENST00000377011 H3BTX0 84 aa9.46□□□□□ -0.89
VRK3-202ENST00000377011 SYS1-DBNDD2H3BUS1 97 aa9.46□□□□□ -0.89
VRK3-202ENST00000377011 LEPROTL1O95214 131 aa9.46□□□□□ -0.89
VRK3-202ENST00000377011 PSG9Q00887 426 aa9.46□□□□□ -0.89
VRK3-202ENST00000377011 ZNF562Q6V9R5 426 aa9.46□□□□□ -0.89
VRK3-202ENST00000377011 TTC9CQ8N5M4 171 aa9.46□□□□□ -0.89
VRK3-202ENST00000377011 MS4A6AQ9H2W1 248 aa9.46□□□□□ -0.89
VRK3-202ENST00000377011 AAMDCQ9H7C9 122 aa9.46□□□□□ -0.89
VRK3-202ENST00000377011 THYN1Q9P016 225 aa9.46□□□□□ -0.89
VRK3-202ENST00000377011 HSPB8Q9UJY1 196 aa9.46□□□□□ -0.89
VRK3-202ENST00000377011 COX11Q9Y6N1 276 aa9.46□□□□□ -0.89
VRK3-202ENST00000377011 TRAV8-1A0A0A6YYK1 113 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 IGHV1-24A0A0C4DH33 117 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 OR4C46A6NHA9 309 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 HSBP1L1C9JCN9 74 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 GNG7O60262 68 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 IL4P05112 153 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 PSMB8P28062 276 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 FCGR2BP31994 310 aaPredicted RBP9.45□□□□□ -0.9
VRK3-202ENST00000377011 ECSCRQ19T08 205 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 SAMD5Q5TGI4 173 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 ZC2HC1AQ96GY0 325 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 IGHG4P01861 327 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 CT45A10P0DMU9 189 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 CSN1S1P47710 185 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 UBE2V1Q13404 147 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 ZNF493Q6ZR52 646 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 ATOH7Q8N100 152 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 KLHL30-AS1Q8NEE0 82 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 ARPC1AQ92747 370 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 RAX2Q96IS3 184 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 MAP1LC3CQ9BXW4 147 aa9.45□□□□□ -0.9
VRK3-202ENST00000377011 TRAV41A0A0B4J266 112 aa9.44□□□□□ -0.9
VRK3-202ENST00000377011 ZNF785A8K8V0 405 aa9.44□□□□□ -0.9
VRK3-202ENST00000377011 IGLV1-40P01703 118 aa9.44□□□□□ -0.9
VRK3-202ENST00000377011 PF4V1P10720 104 aa9.44□□□□□ -0.9
VRK3-202ENST00000377011 HINT1P49773 126 aaPredicted RBP9.44□□□□□ -0.9
VRK3-202ENST00000377011 PTTG1IPP53801 180 aa9.44□□□□□ -0.9
VRK3-202ENST00000377011 KLK9Q2XQG4 91 aa9.44□□□□□ -0.9
VRK3-202ENST00000377011 BEAN1Q3B7T3 259 aa9.44□□□□□ -0.9
VRK3-202ENST00000377011 LINC00482Q8N8I6 264 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms