RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 OR11H12B2RN74 326 aa17.05■□□□□ 0.32
SYNDIG1-201ENST00000376862 LINC01619G3V211 115 aa17.05■□□□□ 0.32
SYNDIG1-201ENST00000376862 IGLV1-47P01700 117 aa17.05■□□□□ 0.32
SYNDIG1-201ENST00000376862 SRSF2Q01130 221 aaKnown RBP17.05■□□□□ 0.32
SYNDIG1-201ENST00000376862 OR11H1Q8NG94 326 aa17.05■□□□□ 0.32
SYNDIG1-201ENST00000376862 OR11H2Q8NH07 326 aa17.05■□□□□ 0.32
SYNDIG1-201ENST00000376862 LINC01548A6NM66 108 aa17.04■□□□□ 0.32
SYNDIG1-201ENST00000376862 ADIPOQQ15848 244 aa17.04■□□□□ 0.32
SYNDIG1-201ENST00000376862 NRACQ8N912 160 aa17.04■□□□□ 0.32
SYNDIG1-201ENST00000376862 LINC01549A6NIU2 74 aa17.04■□□□□ 0.32
SYNDIG1-201ENST00000376862 LGALS1P09382 135 aaKnown RBP17.04■□□□□ 0.32
SYNDIG1-201ENST00000376862 ZFP2Q6ZN57 461 aa17.04■□□□□ 0.32
SYNDIG1-201ENST00000376862 Q6ZS92 163 aa17.04■□□□□ 0.32
SYNDIG1-201ENST00000376862 CARD19Q96LW7 228 aa17.04■□□□□ 0.32
SYNDIG1-201ENST00000376862 BUB1B-PAK6H3BSN5 160 aa17.03■□□□□ 0.32
SYNDIG1-201ENST00000376862 FAM215AQ9Y5M1 114 aa17.03■□□□□ 0.32
SYNDIG1-201ENST00000376862 SMAD5-AS1Q9Y6J3 95 aa17.03■□□□□ 0.32
SYNDIG1-201ENST00000376862 LOC107984156A0A0G2JMH3 177 aa17.03■□□□□ 0.32
SYNDIG1-201ENST00000376862 ARL17AQ8IVW1 177 aa17.03■□□□□ 0.32
SYNDIG1-201ENST00000376862 CFHR4Q92496 578 aa17.03■□□□□ 0.32
SYNDIG1-201ENST00000376862 ERG28Q9UKR5 140 aa17.03■□□□□ 0.32
SYNDIG1-201ENST00000376862 COX7A1P24310 79 aa17.02■□□□□ 0.32
SYNDIG1-201ENST00000376862 NUP37Q8NFH4 326 aa17.02■□□□□ 0.32
SYNDIG1-201ENST00000376862 ZGRF1Q86YA3 2104 aa17.02■□□□□ 0.32
SYNDIG1-201ENST00000376862 F8VRH5 84 aa17.02■□□□□ 0.31
SYNDIG1-201ENST00000376862 H7C1H1 209 aa17.02■□□□□ 0.31
SYNDIG1-201ENST00000376862 DYNAPQ8N1N2 210 aa17.02■□□□□ 0.31
SYNDIG1-201ENST00000376862 RAB1BQ9H0U4 201 aa17.02■□□□□ 0.31
SYNDIG1-201ENST00000376862 IGHV3-23P01764 117 aa17.01■□□□□ 0.31
SYNDIG1-201ENST00000376862 RPL7P18124 248 aaKnown RBP17.01■□□□□ 0.31
SYNDIG1-201ENST00000376862 PKDREJQ9NTG1 2253 aa17.01■□□□□ 0.31
SYNDIG1-201ENST00000376862 PRAC2D3DTV9 90 aa17■□□□□ 0.31
SYNDIG1-201ENST00000376862 TMEM78Q5T7P6 136 aa17■□□□□ 0.31
SYNDIG1-201ENST00000376862 ASCL5Q7RTU5 278 aa17■□□□□ 0.31
SYNDIG1-201ENST00000376862 UFC1Q9Y3C8 167 aa17■□□□□ 0.31
SYNDIG1-201ENST00000376862 TACC2O95359 2948 aa17■□□□□ 0.31
SYNDIG1-201ENST00000376862 MGAQ8IWI9 3026 aa17■□□□□ 0.31
SYNDIG1-201ENST00000376862 IGFBPL1Q8WX77 278 aa17■□□□□ 0.31
SYNDIG1-201ENST00000376862 SRSF8Q9BRL6 282 aaKnown RBP17■□□□□ 0.31
SYNDIG1-201ENST00000376862 KLK15Q9H2R5 256 aa17■□□□□ 0.31
SYNDIG1-201ENST00000376862 F8W735 103 aaPredicted RBP16.99■□□□□ 0.31
SYNDIG1-201ENST00000376862 IL17RELQ6ZVW7 336 aa16.99■□□□□ 0.31
SYNDIG1-201ENST00000376862 SS18L2Q9UHA2 77 aa16.99■□□□□ 0.31
SYNDIG1-201ENST00000376862 CSMD1Q96PZ7 3565 aa16.99■□□□□ 0.31
SYNDIG1-201ENST00000376862 IGKV3D-20A0A0C4DH25 116 aa16.99■□□□□ 0.31
SYNDIG1-201ENST00000376862 C5orf64Q2M2E5 130 aa16.99■□□□□ 0.31
SYNDIG1-201ENST00000376862 PIP4P1Q86T03 277 aa16.99■□□□□ 0.31
SYNDIG1-201ENST00000376862 C11orf21Q9P2W6 132 aa16.99■□□□□ 0.31
SYNDIG1-201ENST00000376862 RP1L1Q8IWN7 2480 aaPredicted RBP16.98■□□□□ 0.31
SYNDIG1-201ENST00000376862 IGHV3OR16-8A0A075B7F1 116 aa16.98■□□□□ 0.31
SYNDIG1-201ENST00000376862 IGFL2Q6UWQ7 119 aa16.98■□□□□ 0.31
SYNDIG1-201ENST00000376862 TRAV12-1A0A0B4J245 112 aa16.98■□□□□ 0.31
SYNDIG1-201ENST00000376862 MFAP4P55083 255 aa16.98■□□□□ 0.31
SYNDIG1-201ENST00000376862 PPDPFLQ8WWR9 84 aa16.98■□□□□ 0.31
SYNDIG1-201ENST00000376862 PLEKHB2Q96CS7 222 aa16.98■□□□□ 0.31
SYNDIG1-201ENST00000376862 RAXQ9Y2V3 346 aa16.98■□□□□ 0.31
SYNDIG1-201ENST00000376862 PRSS29PA6NIE9 313 aa16.97■□□□□ 0.31
SYNDIG1-201ENST00000376862 ZNF672Q499Z4 452 aaPredicted RBP16.97■□□□□ 0.31
SYNDIG1-201ENST00000376862 UBE2D1P51668 147 aa16.96■□□□□ 0.31
SYNDIG1-201ENST00000376862 FANCD2OSQ96PS1 177 aa16.96■□□□□ 0.31
SYNDIG1-201ENST00000376862 PRADC1Q9BSG0 188 aa16.96■□□□□ 0.31
SYNDIG1-201ENST00000376862 KAAG1Q9UBP8 84 aa16.96■□□□□ 0.31
SYNDIG1-201ENST00000376862 TEN1Q86WV5 123 aa16.96■□□□□ 0.3
SYNDIG1-201ENST00000376862 ANAPC13Q9BS18 74 aa16.96■□□□□ 0.3
SYNDIG1-201ENST00000376862 TIMM23O14925 209 aa16.95■□□□□ 0.3
SYNDIG1-201ENST00000376862 UBE2D3P61077 147 aa16.95■□□□□ 0.3
SYNDIG1-201ENST00000376862 UBE2D2P62837 147 aa16.95■□□□□ 0.3
SYNDIG1-201ENST00000376862 RNF182Q8N6D2 247 aa16.95■□□□□ 0.3
SYNDIG1-201ENST00000376862 ZNF815PA8K554 130 aa16.95■□□□□ 0.3
SYNDIG1-201ENST00000376862 A6NJY4 79 aa16.94■□□□□ 0.3
SYNDIG1-201ENST00000376862 SCGB3A1Q96QR1 104 aa16.94■□□□□ 0.3
SYNDIG1-201ENST00000376862 SRSF9Q13242 221 aaKnown RBP eCLIP16.94■□□□□ 0.3
SYNDIG1-201ENST00000376862 SCGB1D4Q6XE38 83 aa16.94■□□□□ 0.3
SYNDIG1-201ENST00000376862 KIR2DL4Q99706 377 aa16.94■□□□□ 0.3
SYNDIG1-201ENST00000376862 VKORC1Q9BQB6 163 aa16.94■□□□□ 0.3
SYNDIG1-201ENST00000376862 IGLV11-55A0A075B6I3 123 aa16.93■□□□□ 0.3
SYNDIG1-201ENST00000376862 NEXN-AS1Q8NBZ9 246 aa16.93■□□□□ 0.3
SYNDIG1-201ENST00000376862 IGHV3-35A0A0C4DH35 117 aa16.93■□□□□ 0.3
SYNDIG1-201ENST00000376862 IGHV7-4-1A0A0J9YVY3 117 aa16.93■□□□□ 0.3
SYNDIG1-201ENST00000376862 TCL1BO95988 128 aa16.93■□□□□ 0.3
SYNDIG1-201ENST00000376862 TGFAP01135 160 aa16.92■□□□□ 0.3
SYNDIG1-201ENST00000376862 BSPH1Q075Z2 132 aa16.92■□□□□ 0.3
SYNDIG1-201ENST00000376862 SMIM2Q9BVW6 85 aa16.92■□□□□ 0.3
SYNDIG1-201ENST00000376862 C21orf62Q9NYP8 219 aa16.92■□□□□ 0.3
SYNDIG1-201ENST00000376862 SLC25A16P16260 332 aa16.92■□□□□ 0.3
SYNDIG1-201ENST00000376862 Q6ZQT7 251 aa16.92■□□□□ 0.3
SYNDIG1-201ENST00000376862 RNF5Q99942 180 aa16.92■□□□□ 0.3
SYNDIG1-201ENST00000376862 NBR2O15453 112 aa16.91■□□□□ 0.3
SYNDIG1-201ENST00000376862 DEFB109BQ30KR1 87 aa16.91■□□□□ 0.3
SYNDIG1-201ENST00000376862 H3BVH4 76 aa16.91■□□□□ 0.3
SYNDIG1-201ENST00000376862 CD7P09564 240 aa16.91■□□□□ 0.3
SYNDIG1-201ENST00000376862 ZNF688P0C7X2 276 aa16.91■□□□□ 0.3
SYNDIG1-201ENST00000376862 RALYQ9UKM9 306 aaKnown RBP16.91■□□□□ 0.3
SYNDIG1-201ENST00000376862 LY6LH3BQJ8 138 aa16.9■□□□□ 0.3
SYNDIG1-201ENST00000376862 KLHL30-AS1Q8NEE0 82 aa16.9■□□□□ 0.3
SYNDIG1-201ENST00000376862 ONECUT1Q9UBC0 465 aa16.9■□□□□ 0.3
SYNDIG1-201ENST00000376862 TOMM6Q96B49 74 aa16.9■□□□□ 0.3
SYNDIG1-201ENST00000376862 RIF1Q5UIP0 2472 aaKnown RBP16.89■□□□□ 0.29
SYNDIG1-201ENST00000376862 SPANXN1Q5VSR9 72 aa16.89■□□□□ 0.29
SYNDIG1-201ENST00000376862 OR11H6Q8NGC7 330 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms