RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 C10orf99Q6UWK7 81 aa8.7□□□□□ -1.02
HDAC6-203ENST00000376619 THAP8Q8NA92 274 aa8.7□□□□□ -1.02
HDAC6-203ENST00000376619 MIEN1Q9BRT3 115 aa8.7□□□□□ -1.02
HDAC6-203ENST00000376619 SNHG12Q9BXW3 62 aa8.7□□□□□ -1.02
HDAC6-203ENST00000376619 EGR2P11161 476 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-203ENST00000376619 PRR25Q96S07 402 aa8.69□□□□□ -1.02
HDAC6-203ENST00000376619 MPV17L2Q567V2 206 aa8.69□□□□□ -1.02
HDAC6-203ENST00000376619 ALKBH7Q9BT30 221 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-203ENST00000376619 FNDC10F2Z333 226 aa8.69□□□□□ -1.02
HDAC6-203ENST00000376619 YPEL3P61236 119 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-203ENST00000376619 DEFB112Q30KQ8 113 aa8.69□□□□□ -1.02
HDAC6-203ENST00000376619 C8orf86Q6ZUL3 223 aa8.69□□□□□ -1.02
HDAC6-203ENST00000376619 UBE2E2Q96LR5 201 aa8.69□□□□□ -1.02
HDAC6-203ENST00000376619 KLK9Q9UKQ9 250 aa8.69□□□□□ -1.02
HDAC6-203ENST00000376619 A0A0G2JLM5 398 aa8.69□□□□□ -1.02
HDAC6-203ENST00000376619 TYMSP04818 313 aa8.69□□□□□ -1.02
HDAC6-203ENST00000376619 RNF5Q99942 180 aa8.69□□□□□ -1.02
HDAC6-203ENST00000376619 CSMD1Q96PZ7 3565 aa8.68□□□□□ -1.02
HDAC6-203ENST00000376619 SPINK13Q1W4C9 94 aa8.68□□□□□ -1.02
HDAC6-203ENST00000376619 UNQ9165/PRO28630Q6UXU0 137 aa8.68□□□□□ -1.02
HDAC6-203ENST00000376619 OR11H6Q8NGC7 330 aa8.68□□□□□ -1.02
HDAC6-203ENST00000376619 PYGO2Q9BRQ0 406 aa8.68□□□□□ -1.02
HDAC6-203ENST00000376619 H3BRN7 92 aa8.68□□□□□ -1.02
HDAC6-203ENST00000376619 Q6ZS46 218 aa8.68□□□□□ -1.02
HDAC6-203ENST00000376619 ASIPP42127 132 aa8.68□□□□□ -1.02
HDAC6-203ENST00000376619 SNRPD3P62318 126 aaKnown RBP8.68□□□□□ -1.02
HDAC6-203ENST00000376619 C1orf194Q5T5A4 169 aa8.68□□□□□ -1.02
HDAC6-203ENST00000376619 GTSCR1Q86UQ5 136 aa8.68□□□□□ -1.02
HDAC6-203ENST00000376619 Q96MF0 132 aa8.68□□□□□ -1.02
HDAC6-203ENST00000376619 GDF5OSQ5U4N7 250 aa8.67□□□□□ -1.02
HDAC6-203ENST00000376619 AGPAT4-IT1Q9H0P7 198 aa8.67□□□□□ -1.02
HDAC6-203ENST00000376619 A0A0U1RRA0 63 aa8.67□□□□□ -1.02
HDAC6-203ENST00000376619 SMIM27A0A1W2PRY6 76 aa8.67□□□□□ -1.02
HDAC6-203ENST00000376619 K7EMI3 77 aa8.67□□□□□ -1.02
HDAC6-203ENST00000376619 IGLV2-8P01709 118 aa8.67□□□□□ -1.02
HDAC6-203ENST00000376619 PRSS2P07478 247 aa8.67□□□□□ -1.02
HDAC6-203ENST00000376619 OR10J3Q5JRS4 329 aa8.67□□□□□ -1.02
HDAC6-203ENST00000376619 TMEM170BQ5T4T1 132 aa8.67□□□□□ -1.02
HDAC6-203ENST00000376619 IGHV3-53P01767 116 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 IGF1P05019 195 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 TSPOP30536 169 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 LMO4P61968 165 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 Q1RN00 199 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 TEX15Q9BXT5 2789 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 TRAV9-2A0A087WT02 112 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 GNRH2O43555 120 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 IGLL1P15814 213 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 PAX1P15863 534 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 NSUN5P1Q3KNT7 163 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 Q5PR19 223 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 Q6ZQT7 251 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 TTTY13Q9BZ97 58 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 GCN1Q92616 2671 aaKnown RBP8.66□□□□□ -1.02
HDAC6-203ENST00000376619 IGLV11-55A0A075B6I3 123 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 TRAV9-1A0A075B6T8 112 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 NPYP01303 97 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 IFI27L1Q96BM0 104 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 KLF2Q9Y5W3 355 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-203ENST00000376619 LY96Q9Y6Y9 160 aa8.66□□□□□ -1.02
HDAC6-203ENST00000376619 SYS1-DBNDD2H3BUS1 97 aa8.65□□□□□ -1.02
HDAC6-203ENST00000376619 KIR3DS1Q14943 382 aa8.65□□□□□ -1.02
HDAC6-203ENST00000376619 LINC00469Q8N7U9 141 aa8.65□□□□□ -1.02
HDAC6-203ENST00000376619 FAM110DQ8TAY7 271 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-203ENST00000376619 IGF2BP2-AS1Q96M15 143 aa8.65□□□□□ -1.02
HDAC6-203ENST00000376619 SCGB3A1Q96QR1 104 aa8.65□□□□□ -1.02
HDAC6-203ENST00000376619 RAB9AP51151 201 aa8.65□□□□□ -1.02
HDAC6-203ENST00000376619 RNF114Q9Y508 228 aa8.65□□□□□ -1.02
HDAC6-203ENST00000376619 IGHV1-24A0A0C4DH33 117 aa8.65□□□□□ -1.02
HDAC6-203ENST00000376619 SCGB1C2P0DMR2 95 aa8.65□□□□□ -1.02
HDAC6-203ENST00000376619 TMEM158Q8WZ71 300 aa8.65□□□□□ -1.02
HDAC6-203ENST00000376619 RAI1Q7Z5J4 1906 aaPredicted RBP8.65□□□□□ -1.03
HDAC6-203ENST00000376619 HOXA3O43365 443 aaPredicted RBP8.65□□□□□ -1.03
HDAC6-203ENST00000376619 DNLZQ5SXM8 178 aa8.65□□□□□ -1.03
HDAC6-203ENST00000376619 OR1N2Q8NGR9 330 aa8.65□□□□□ -1.03
HDAC6-203ENST00000376619 YPEL4Q96NS1 127 aa8.65□□□□□ -1.03
HDAC6-203ENST00000376619 SLC50A1Q9BRV3 221 aa8.65□□□□□ -1.03
HDAC6-203ENST00000376619 PRSS22Q9GZN4 317 aa8.65□□□□□ -1.03
HDAC6-203ENST00000376619 SRSF2Q01130 221 aaKnown RBP8.64□□□□□ -1.03
HDAC6-203ENST00000376619 MRPL51Q4U2R6 128 aaKnown RBP8.64□□□□□ -1.03
HDAC6-203ENST00000376619 LINC01587Q99440 93 aa8.64□□□□□ -1.03
HDAC6-203ENST00000376619 MRPL27Q9P0M9 148 aaKnown RBP8.64□□□□□ -1.03
HDAC6-203ENST00000376619 F8P00451 2351 aa8.64□□□□□ -1.03
HDAC6-203ENST00000376619 ZNF80P51504 273 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-203ENST00000376619 RPS20P60866 119 aaKnown RBP8.64□□□□□ -1.03
HDAC6-203ENST00000376619 CD300EQ496F6 205 aaPredicted RBP8.64□□□□□ -1.03
HDAC6-203ENST00000376619 TMEM97Q5BJF2 176 aa8.64□□□□□ -1.03
HDAC6-203ENST00000376619 IGHV3-16A0A0C4DH30 117 aa8.64□□□□□ -1.03
HDAC6-203ENST00000376619 LTAP01374 205 aa8.64□□□□□ -1.03
HDAC6-203ENST00000376619 KLHL30-AS1Q8NEE0 82 aa8.64□□□□□ -1.03
HDAC6-203ENST00000376619 CFHR4Q92496 578 aa8.64□□□□□ -1.03
HDAC6-203ENST00000376619 HIST1H4GQ99525 98 aa8.64□□□□□ -1.03
HDAC6-203ENST00000376619 LOC107984156A0A0G2JMH3 177 aa8.63□□□□□ -1.03
HDAC6-203ENST00000376619 OOSP1A8MZH6 123 aa8.63□□□□□ -1.03
HDAC6-203ENST00000376619 HBDP02042 147 aa8.63□□□□□ -1.03
HDAC6-203ENST00000376619 DEFB131AP59861 70 aa8.63□□□□□ -1.03
HDAC6-203ENST00000376619 LOXL1Q08397 574 aaPredicted RBP8.63□□□□□ -1.03
HDAC6-203ENST00000376619 Q0VG73 95 aa8.63□□□□□ -1.03
HDAC6-203ENST00000376619 ARL17AQ8IVW1 177 aa8.63□□□□□ -1.03
HDAC6-203ENST00000376619 LINC00574Q9H8X3 128 aa8.63□□□□□ -1.03
HDAC6-203ENST00000376619 PEF1Q9UBV8 284 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms