RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 C5orf64Q2M2E5 130 aa9.19□□□□□ -0.94
MCF2L-202ENST00000375597 SH2D6Q7Z4S9 175 aa9.19□□□□□ -0.94
MCF2L-202ENST00000375597 MRPL52Q86TS9 123 aaKnown RBP9.19□□□□□ -0.94
MCF2L-202ENST00000375597 CFHR4Q92496 578 aa9.19□□□□□ -0.94
MCF2L-202ENST00000375597 PPP1R14DQ9NXH3 145 aa9.19□□□□□ -0.94
MCF2L-202ENST00000375597 MTORP42345 2549 aa9.19□□□□□ -0.94
MCF2L-202ENST00000375597 IGHV3-64A0A075B6Q5 118 aa9.19□□□□□ -0.94
MCF2L-202ENST00000375597 F5H697 171 aa9.19□□□□□ -0.94
MCF2L-202ENST00000375597 TNFRSF6BO95407 300 aa9.19□□□□□ -0.94
MCF2L-202ENST00000375597 VMO1Q7Z5L0 202 aa9.19□□□□□ -0.94
MCF2L-202ENST00000375597 CYSLTR1Q9Y271 337 aa9.19□□□□□ -0.94
MCF2L-202ENST00000375597 LOC107984156A0A0G2JMH3 177 aa9.19□□□□□ -0.94
MCF2L-202ENST00000375597 RPL7P18124 248 aaKnown RBP9.19□□□□□ -0.94
MCF2L-202ENST00000375597 SAMD5Q5TGI4 173 aa9.19□□□□□ -0.94
MCF2L-202ENST00000375597 FAM74A4Q5TZK3 123 aa9.19□□□□□ -0.94
MCF2L-202ENST00000375597 ARL17AQ8IVW1 177 aa9.19□□□□□ -0.94
MCF2L-202ENST00000375597 Q8NA96 180 aa9.19□□□□□ -0.94
MCF2L-202ENST00000375597 MRPL35Q9NZE8 188 aaKnown RBP9.19□□□□□ -0.94
MCF2L-202ENST00000375597 CDKN1BP46527 198 aa9.18□□□□□ -0.94
MCF2L-202ENST00000375597 PIP4P1Q86T03 277 aa9.18□□□□□ -0.94
MCF2L-202ENST00000375597 C16orf92Q96LL3 132 aa9.18□□□□□ -0.94
MCF2L-202ENST00000375597 SOX21Q9Y651 276 aaPredicted RBP9.18□□□□□ -0.94
MCF2L-202ENST00000375597 EPG5Q9HCE0 2579 aa9.18□□□□□ -0.94
MCF2L-202ENST00000375597 PIP4P2Q8N4L2 257 aa9.18□□□□□ -0.94
MCF2L-202ENST00000375597 LINC00477Q96M19 166 aa9.18□□□□□ -0.94
MCF2L-202ENST00000375597 FANCD2OSQ96PS1 177 aa9.18□□□□□ -0.94
MCF2L-202ENST00000375597 VKORC1Q9BQB6 163 aa9.18□□□□□ -0.94
MCF2L-202ENST00000375597 B9A039 149 aa9.18□□□□□ -0.94
MCF2L-202ENST00000375597 H3BMG7 143 aa9.18□□□□□ -0.94
MCF2L-202ENST00000375597 SCGB1D4Q6XE38 83 aa9.18□□□□□ -0.94
MCF2L-202ENST00000375597 C14orf178Q8N769 122 aaPredicted RBP9.18□□□□□ -0.94
MCF2L-202ENST00000375597 FN1P02751 2386 aaKnown RBP9.17□□□□□ -0.94
MCF2L-202ENST00000375597 APOMO95445 188 aa9.17□□□□□ -0.94
MCF2L-202ENST00000375597 ZNF418Q8TF45 676 aaPredicted RBP9.17□□□□□ -0.94
MCF2L-202ENST00000375597 ETDBQ3ZM63 59 aa9.17□□□□□ -0.94
MCF2L-202ENST00000375597 TMEM78Q5T7P6 136 aa9.17□□□□□ -0.94
MCF2L-202ENST00000375597 DTX2Q86UW9 622 aa9.17□□□□□ -0.94
MCF2L-202ENST00000375597 TEX48A0A1B0GUV7 120 aa9.17□□□□□ -0.94
MCF2L-202ENST00000375597 ATP6V0E1O15342 81 aa9.17□□□□□ -0.94
MCF2L-202ENST00000375597 SMIM13P0DJ93 91 aa9.17□□□□□ -0.94
MCF2L-202ENST00000375597 CEACAM3P40198 252 aa9.17□□□□□ -0.94
MCF2L-202ENST00000375597 CHAC1Q9BUX1 264 aa9.17□□□□□ -0.94
MCF2L-202ENST00000375597 SMIM17P0DL12 118 aa9.16□□□□□ -0.94
MCF2L-202ENST00000375597 CT83Q5H943 113 aa9.16□□□□□ -0.94
MCF2L-202ENST00000375597 HIST2H2BDQ6DRA6 164 aa9.16□□□□□ -0.94
MCF2L-202ENST00000375597 GFRA4Q9GZZ7 299 aa9.16□□□□□ -0.94
MCF2L-202ENST00000375597 MS4A6AQ9H2W1 248 aa9.16□□□□□ -0.94
MCF2L-202ENST00000375597 LINC00574Q9H8X3 128 aa9.16□□□□□ -0.94
MCF2L-202ENST00000375597 PVRIGQ6DKI7 326 aa9.16□□□□□ -0.94
MCF2L-202ENST00000375597 MYOZ3Q8TDC0 251 aa9.16□□□□□ -0.94
MCF2L-202ENST00000375597 RAB1BQ9H0U4 201 aa9.16□□□□□ -0.94
MCF2L-202ENST00000375597 FABP5P3A8MUU1 101 aa9.15□□□□□ -0.94
MCF2L-202ENST00000375597 NPIPB6E9PJ23 425 aa9.15□□□□□ -0.94
MCF2L-202ENST00000375597 CD300EQ496F6 205 aaPredicted RBP9.15□□□□□ -0.94
MCF2L-202ENST00000375597 LINC00311Q8N616 119 aa9.15□□□□□ -0.94
MCF2L-202ENST00000375597 WFDC2Q14508 124 aa9.15□□□□□ -0.94
MCF2L-202ENST00000375597 RPL39LQ96EH5 51 aaKnown RBP9.15□□□□□ -0.94
MCF2L-202ENST00000375597 C9orf118A6NHY6 69 aa9.15□□□□□ -0.95
MCF2L-202ENST00000375597 IGKCP01834 107 aa9.15□□□□□ -0.95
MCF2L-202ENST00000375597 CTSGP08311 255 aa9.15□□□□□ -0.95
MCF2L-202ENST00000375597 ZFP36P26651 326 aaKnown RBP9.15□□□□□ -0.95
MCF2L-202ENST00000375597 RNASE4P34096 147 aaKnown RBP9.15□□□□□ -0.95
MCF2L-202ENST00000375597 BMI1P35226 326 aa9.14□□□□□ -0.95
MCF2L-202ENST00000375597 SRSF9Q13242 221 aaKnown RBP eCLIP9.14□□□□□ -0.95
MCF2L-202ENST00000375597 TMEM30BQ3MIR4 351 aa9.14□□□□□ -0.95
MCF2L-202ENST00000375597 NCOR1P1Q9H4R4 102 aa9.14□□□□□ -0.95
MCF2L-202ENST00000375597 C11orf21Q9P2W6 132 aa9.14□□□□□ -0.95
MCF2L-202ENST00000375597 SMAD5-AS1Q9Y6J3 95 aa9.14□□□□□ -0.95
MCF2L-202ENST00000375597 CRXO43186 299 aaPredicted RBP9.14□□□□□ -0.95
MCF2L-202ENST00000375597 HSD52Q0P140 79 aa9.14□□□□□ -0.95
MCF2L-202ENST00000375597 LY6DQ14210 128 aa9.14□□□□□ -0.95
MCF2L-202ENST00000375597 MAPKAPK5-AS1Q8N8E1 139 aa9.14□□□□□ -0.95
MCF2L-202ENST00000375597 AGPAT4-IT1Q9H0P7 198 aa9.14□□□□□ -0.95
MCF2L-202ENST00000375597 ADAMTSL5Q6ZMM2 481 aa9.14□□□□□ -0.95
MCF2L-202ENST00000375597 A0A087WWL8 130 aa9.13□□□□□ -0.95
MCF2L-202ENST00000375597 CRYGBP07316 175 aa9.13□□□□□ -0.95
MCF2L-202ENST00000375597 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.13□□□□□ -0.95
MCF2L-202ENST00000375597 TRBV12-3P01733 135 aa9.13□□□□□ -0.95
MCF2L-202ENST00000375597 SEC11AP67812 179 aa9.13□□□□□ -0.95
MCF2L-202ENST00000375597 KLHL30-AS1Q8NEE0 82 aa9.13□□□□□ -0.95
MCF2L-202ENST00000375597 TRBV25-1A0A075B6N4 114 aa9.12□□□□□ -0.95
MCF2L-202ENST00000375597 A0A1W2PPM0 123 aa9.12□□□□□ -0.95
MCF2L-202ENST00000375597 TCF15Q12870 199 aa9.12□□□□□ -0.95
MCF2L-202ENST00000375597 CEACAM4O75871 244 aa9.12□□□□□ -0.95
MCF2L-202ENST00000375597 PF4V1P10720 104 aa9.12□□□□□ -0.95
MCF2L-202ENST00000375597 FGF6P10767 208 aa9.12□□□□□ -0.95
MCF2L-202ENST00000375597 SAA4P35542 130 aa9.12□□□□□ -0.95
MCF2L-202ENST00000375597 TMEM14CQ9P0S9 112 aa9.12□□□□□ -0.95
MCF2L-202ENST00000375597 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.12□□□□□ -0.95
MCF2L-202ENST00000375597 SCGB3A1Q96QR1 104 aa9.12□□□□□ -0.95
MCF2L-202ENST00000375597 JPT2Q9H910 190 aa9.12□□□□□ -0.95
MCF2L-202ENST00000375597 ZNF256Q9Y2P7 627 aaPredicted RBP9.12□□□□□ -0.95
MCF2L-202ENST00000375597 RAXQ9Y2V3 346 aa9.12□□□□□ -0.95
MCF2L-202ENST00000375597 PHLDA3Q9Y5J5 127 aa9.12□□□□□ -0.95
MCF2L-202ENST00000375597 DPM2O94777 84 aa9.11□□□□□ -0.95
MCF2L-202ENST00000375597 IGFL3Q6UXB1 125 aa9.11□□□□□ -0.95
MCF2L-202ENST00000375597 BEX4Q9NWD9 120 aaPredicted RBP9.11□□□□□ -0.95
MCF2L-202ENST00000375597 TSSC4Q9Y5U2 329 aaPredicted RBP9.11□□□□□ -0.95
MCF2L-202ENST00000375597 ACANP16112 2415 aa9.11□□□□□ -0.95
MCF2L-202ENST00000375597 IGHV7-81A0A0B4J1V7 117 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms