RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 PCDH15Q96QU1 1955 aa9.15□□□□□ -0.95
PTCH1-203ENST00000375274 A0A1W2PPM0 123 aa9.14□□□□□ -0.95
PTCH1-203ENST00000375274 PIP4P2Q8N4L2 257 aa9.14□□□□□ -0.95
PTCH1-203ENST00000375274 DKK2Q9UBU2 259 aa9.14□□□□□ -0.95
PTCH1-203ENST00000375274 MED12LQ86YW9 2145 aa9.14□□□□□ -0.95
PTCH1-203ENST00000375274 LINC00158P58513 81 aa9.14□□□□□ -0.95
PTCH1-203ENST00000375274 LHBP01229 141 aa9.14□□□□□ -0.95
PTCH1-203ENST00000375274 DEFB125Q8N687 156 aa9.14□□□□□ -0.95
PTCH1-203ENST00000375274 C1orf159Q96HA4 380 aa9.14□□□□□ -0.95
PTCH1-203ENST00000375274 CTSZQ9UBR2 303 aa9.14□□□□□ -0.95
PTCH1-203ENST00000375274 PLA2G2CQ5R387 149 aa9.14□□□□□ -0.95
PTCH1-203ENST00000375274 PATE2Q6UY27 113 aa9.14□□□□□ -0.95
PTCH1-203ENST00000375274 PMVKQ15126 192 aa9.13□□□□□ -0.95
PTCH1-203ENST00000375274 SPRNQ5BIV9 151 aa9.13□□□□□ -0.95
PTCH1-203ENST00000375274 C8orf31Q8N9H6 132 aa9.13□□□□□ -0.95
PTCH1-203ENST00000375274 PRADC1Q9BSG0 188 aa9.13□□□□□ -0.95
PTCH1-203ENST00000375274 MYMXA0A1B0GTQ4 84 aa9.13□□□□□ -0.95
PTCH1-203ENST00000375274 SDHAF1A6NFY7 115 aa9.13□□□□□ -0.95
PTCH1-203ENST00000375274 TMEM86BQ8N661 226 aa9.13□□□□□ -0.95
PTCH1-203ENST00000375274 TSSC4Q9Y5U2 329 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-203ENST00000375274 TRGV1A0A0A0MS02 117 aa9.13□□□□□ -0.95
PTCH1-203ENST00000375274 SIVA1O15304 175 aa9.13□□□□□ -0.95
PTCH1-203ENST00000375274 TRPT1Q86TN4 253 aaKnown RBP9.13□□□□□ -0.95
PTCH1-203ENST00000375274 TRBV20-1A0A075B6N2 111 aa9.13□□□□□ -0.95
PTCH1-203ENST00000375274 F8W1H4 67 aa9.13□□□□□ -0.95
PTCH1-203ENST00000375274 FAM167A-AS1Q96KT0 104 aa9.13□□□□□ -0.95
PTCH1-203ENST00000375274 IGKV1OR2-108A0A075B7D4 117 aa9.12□□□□□ -0.95
PTCH1-203ENST00000375274 CCL25O15444 150 aa9.12□□□□□ -0.95
PTCH1-203ENST00000375274 RASL10AQ92737 203 aa9.12□□□□□ -0.95
PTCH1-203ENST00000375274 KIF26AQ9ULI4 1882 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-203ENST00000375274 EGR2P11161 476 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-203ENST00000375274 HTN3P15516 51 aa9.12□□□□□ -0.95
PTCH1-203ENST00000375274 ANXA2RQ3ZCQ2 193 aa9.12□□□□□ -0.95
PTCH1-203ENST00000375274 KMT2EQ8IZD2 1858 aa9.12□□□□□ -0.95
PTCH1-203ENST00000375274 HLA-DRB4P13762 266 aa9.12□□□□□ -0.95
PTCH1-203ENST00000375274 SYNJ2BPP57105 145 aa9.12□□□□□ -0.95
PTCH1-203ENST00000375274 LINC00173Q6ZV60 143 aa9.12□□□□□ -0.95
PTCH1-203ENST00000375274 HLA-DRB4X5D2U9 266 aa9.12□□□□□ -0.95
PTCH1-203ENST00000375274 DENND4AQ7Z401 1863 aa9.12□□□□□ -0.95
PTCH1-203ENST00000375274 ZNF106Q9H2Y7 1883 aaKnown RBP9.12□□□□□ -0.95
PTCH1-203ENST00000375274 IGKV1-17P01599 117 aa9.12□□□□□ -0.95
PTCH1-203ENST00000375274 FRMD6-AS1P0C7T7 363 aa9.12□□□□□ -0.95
PTCH1-203ENST00000375274 GP9P14770 177 aa9.12□□□□□ -0.95
PTCH1-203ENST00000375274 HLA-DMBP28068 263 aa9.12□□□□□ -0.95
PTCH1-203ENST00000375274 TRAV8-3A0A0A6YYJ7 113 aa9.11□□□□□ -0.95
PTCH1-203ENST00000375274 H3BMG7 143 aa9.11□□□□□ -0.95
PTCH1-203ENST00000375274 MALP21145 153 aa9.11□□□□□ -0.95
PTCH1-203ENST00000375274 DSCR9P59020 149 aa9.11□□□□□ -0.95
PTCH1-203ENST00000375274 RUSC1-AS1Q66K80 236 aa9.11□□□□□ -0.95
PTCH1-203ENST00000375274 PRIMA1Q86XR5 153 aa9.11□□□□□ -0.95
PTCH1-203ENST00000375274 IGF2BP2-AS1Q96M15 143 aa9.11□□□□□ -0.95
PTCH1-203ENST00000375274 TRAV13-1A0A0B4J241 112 aa9.11□□□□□ -0.95
PTCH1-203ENST00000375274 C22orf46C9J442 243 aa9.11□□□□□ -0.95
PTCH1-203ENST00000375274 CRPP02741 224 aa9.11□□□□□ -0.95
PTCH1-203ENST00000375274 Q6ZPA2 131 aa9.11□□□□□ -0.95
PTCH1-203ENST00000375274 PCP2Q8IVA1 136 aa9.11□□□□□ -0.95
PTCH1-203ENST00000375274 PHLDA1Q8WV24 401 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-203ENST00000375274 TMEM141Q96I45 108 aa9.11□□□□□ -0.95
PTCH1-203ENST00000375274 IGHV2-70DA0A0C4DH43 119 aa9.11□□□□□ -0.95
PTCH1-203ENST00000375274 SPINK13Q1W4C9 94 aa9.11□□□□□ -0.95
PTCH1-203ENST00000375274 C1orf122Q6ZSJ8 110 aa9.11□□□□□ -0.95
PTCH1-203ENST00000375274 NEGR1Q7Z3B1 354 aa9.11□□□□□ -0.95
PTCH1-203ENST00000375274 SONP18583 2426 aaKnown RBP9.11□□□□□ -0.95
PTCH1-203ENST00000375274 K7ERJ3 54 aa9.1□□□□□ -0.95
PTCH1-203ENST00000375274 PAX4O43316 350 aa9.1□□□□□ -0.95
PTCH1-203ENST00000375274 TAL2Q16559 108 aa9.1□□□□□ -0.95
PTCH1-203ENST00000375274 AMTNQ6UX39 209 aa9.1□□□□□ -0.95
PTCH1-203ENST00000375274 CEND1Q8N111 149 aa9.1□□□□□ -0.95
PTCH1-203ENST00000375274 IGHV3-53P01767 116 aa9.1□□□□□ -0.95
PTCH1-203ENST00000375274 DEFB131AP59861 70 aa9.1□□□□□ -0.95
PTCH1-203ENST00000375274 CRIP3Q6Q6R5 217 aa9.1□□□□□ -0.95
PTCH1-203ENST00000375274 DKK4Q9UBT3 224 aa9.1□□□□□ -0.95
PTCH1-203ENST00000375274 KNCNA6PVL3 124 aa9.1□□□□□ -0.95
PTCH1-203ENST00000375274 ODF3L1Q8IXM7 274 aa9.1□□□□□ -0.95
PTCH1-203ENST00000375274 DYNAPQ8N1N2 210 aa9.1□□□□□ -0.95
PTCH1-203ENST00000375274 AGPAT4-IT1Q9H0P7 198 aa9.1□□□□□ -0.95
PTCH1-203ENST00000375274 K7ENP7 123 aa9.09□□□□□ -0.95
PTCH1-203ENST00000375274 SLC25A20O43772 301 aa9.09□□□□□ -0.95
PTCH1-203ENST00000375274 NDUFA4O00483 81 aa9.09□□□□□ -0.95
PTCH1-203ENST00000375274 GATD1Q8NB37 220 aa9.09□□□□□ -0.95
PTCH1-203ENST00000375274 PPDPFLQ8WWR9 84 aa9.09□□□□□ -0.95
PTCH1-203ENST00000375274 GHRHP01286 108 aa9.09□□□□□ -0.95
PTCH1-203ENST00000375274 ANKRD39Q53RE8 183 aa9.09□□□□□ -0.95
PTCH1-203ENST00000375274 LINC01545Q5VT33 79 aa9.09□□□□□ -0.95
PTCH1-203ENST00000375274 UBE2E2Q96LR5 201 aa9.09□□□□□ -0.95
PTCH1-203ENST00000375274 WT1P19544 449 aaPredicted RBP9.09□□□□□ -0.95
PTCH1-203ENST00000375274 GNLYP22749 145 aa9.09□□□□□ -0.95
PTCH1-203ENST00000375274 OR11H6Q8NGC7 330 aa9.09□□□□□ -0.95
PTCH1-203ENST00000375274 ZNF625Q96I27 306 aaPredicted RBP9.09□□□□□ -0.95
PTCH1-203ENST00000375274 A0A087WX48 190 aa9.08□□□□□ -0.96
PTCH1-203ENST00000375274 IGHV1-69DA0A0B4J2H0 117 aa9.08□□□□□ -0.96
PTCH1-203ENST00000375274 IGHV1-69P01742 117 aa9.08□□□□□ -0.96
PTCH1-203ENST00000375274 C20orf78Q9BR46 151 aa9.08□□□□□ -0.96
PTCH1-203ENST00000375274 K7EIM0 57 aa9.08□□□□□ -0.96
PTCH1-203ENST00000375274 INSP01308 110 aa9.08□□□□□ -0.96
PTCH1-203ENST00000375274 P0C879 139 aa9.08□□□□□ -0.96
PTCH1-203ENST00000375274 GTSF1Q8WW33 167 aa9.08□□□□□ -0.96
PTCH1-203ENST00000375274 MSRB2Q9Y3D2 182 aa9.08□□□□□ -0.96
PTCH1-203ENST00000375274 NACAE9PAV3 2078 aa9.08□□□□□ -0.96
PTCH1-203ENST00000375274 I3L2K1 104 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms