RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 Q6ZUT4 128 aa6.41□□□□□ -1.38
UBR4-202ENST00000375224 TMEM75Q8N9X5 138 aa6.41□□□□□ -1.38
UBR4-202ENST00000375224 WIPF2Q8TF74 440 aaPredicted RBP6.41□□□□□ -1.38
UBR4-202ENST00000375224 C7orf69Q9H7B7 122 aa6.41□□□□□ -1.38
UBR4-202ENST00000375224 ACACBO00763 2458 aa6.4□□□□□ -1.38
UBR4-202ENST00000375224 A8MWL6 223 aa6.4□□□□□ -1.38
UBR4-202ENST00000375224 F8W735 103 aaPredicted RBP6.4□□□□□ -1.38
UBR4-202ENST00000375224 ATP6V0E1O15342 81 aa6.4□□□□□ -1.38
UBR4-202ENST00000375224 COX8AP10176 69 aa6.4□□□□□ -1.38
UBR4-202ENST00000375224 GAGE2BQ13066 116 aa6.4□□□□□ -1.38
UBR4-202ENST00000375224 GAGE2EQ4V326 116 aa6.4□□□□□ -1.38
UBR4-202ENST00000375224 ATP5L2Q7Z4Y8 100 aa6.4□□□□□ -1.38
UBR4-202ENST00000375224 C5orf56Q8N8D9 126 aa6.4□□□□□ -1.38
UBR4-202ENST00000375224 ZNF414Q96IQ9 312 aa6.4□□□□□ -1.38
UBR4-202ENST00000375224 GAGE2DQ9UEU5 116 aa6.4□□□□□ -1.38
UBR4-202ENST00000375224 H3BTX0 84 aa6.4□□□□□ -1.39
UBR4-202ENST00000375224 SYS1-DBNDD2H3BUS1 97 aa6.4□□□□□ -1.39
UBR4-202ENST00000375224 MRPS12O15235 138 aaKnown RBP6.4□□□□□ -1.39
UBR4-202ENST00000375224 P01737 135 aa6.4□□□□□ -1.39
UBR4-202ENST00000375224 CTSGP08311 255 aa6.4□□□□□ -1.39
UBR4-202ENST00000375224 CSN1S1P47710 185 aa6.4□□□□□ -1.39
UBR4-202ENST00000375224 EEF1AKMT3Q96AZ1 226 aa6.4□□□□□ -1.39
UBR4-202ENST00000375224 MAP1LC3AQ9H492 121 aa6.4□□□□□ -1.39
UBR4-202ENST00000375224 RPP21Q9H633 154 aaKnown RBP6.4□□□□□ -1.39
UBR4-202ENST00000375224 S4R3C0 116 aa6.4□□□□□ -1.39
UBR4-202ENST00000375224 LRBAP50851 2863 aa6.4□□□□□ -1.39
UBR4-202ENST00000375224 SIGLEC15Q6ZMC9 328 aa6.4□□□□□ -1.39
UBR4-202ENST00000375224 GOLT1AQ6ZVE7 132 aa6.4□□□□□ -1.39
UBR4-202ENST00000375224 Q86TA4 180 aa6.4□□□□□ -1.39
UBR4-202ENST00000375224 EXOC3-AS1Q8N2X6 119 aa6.4□□□□□ -1.39
UBR4-202ENST00000375224 ZNF502Q8TBZ5 544 aa6.4□□□□□ -1.39
UBR4-202ENST00000375224 GFRA4Q9GZZ7 299 aa6.4□□□□□ -1.39
UBR4-202ENST00000375224 ITPR1Q14643 2758 aa6.39□□□□□ -1.39
UBR4-202ENST00000375224 TRBV20-1A0A075B6N2 111 aa6.39□□□□□ -1.39
UBR4-202ENST00000375224 TRBV7-1A0A0A6YYK4 115 aa6.39□□□□□ -1.39
UBR4-202ENST00000375224 SMIM9A6NGZ8 99 aa6.39□□□□□ -1.39
UBR4-202ENST00000375224 PRSS29PA6NIE9 313 aa6.39□□□□□ -1.39
UBR4-202ENST00000375224 SRSF1Q07955 248 aaKnown RBP eCLIP6.39□□□□□ -1.391e-9■■■□□ 16.2
UBR4-202ENST00000375224 C15orf32Q32M92 178 aa6.39□□□□□ -1.39
UBR4-202ENST00000375224 NRGNQ92686 78 aa6.39□□□□□ -1.39
UBR4-202ENST00000375224 PRSS22Q9GZN4 317 aa6.39□□□□□ -1.39
UBR4-202ENST00000375224 MSMBP08118 114 aa6.39□□□□□ -1.39
UBR4-202ENST00000375224 SLC25A16P16260 332 aa6.39□□□□□ -1.39
UBR4-202ENST00000375224 MEIG1Q5JSS6 88 aa6.39□□□□□ -1.39
UBR4-202ENST00000375224 NUP35Q8NFH5 326 aa6.39□□□□□ -1.39
UBR4-202ENST00000375224 TRAV40A0A0B4J280 105 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 C19orf71A6NCJ1 209 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 B4DSR2 109 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 GCSHP23434 173 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 CRIP2P52943 208 aaPredicted RBP6.38□□□□□ -1.39
UBR4-202ENST00000375224 PRNTQ86SH4 94 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 OR4X2Q8NGF9 303 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 TMEM126AQ9H061 195 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 IGHV4-30-2A0A087WSY4 118 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 C2orf70A6NJV1 201 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 CCDC179H3BU77 68 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 IGHV3-23P01764 117 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 OR13C6PQ8NH95 151 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 SGK494Q96LW2 274 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 MED13LQ71F56 2210 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 A0A087WX48 190 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 FAM223BA6NKX1 122 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 HIGD1CA8MV81 97 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 WIPF1O43516 503 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 SNCGO76070 127 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 COX6B1P14854 86 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 COL8A1P27658 744 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 EMP1P54849 157 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 FAM223AQ8IWN6 122 aa6.38□□□□□ -1.39
UBR4-202ENST00000375224 RELNP78509 3460 aa6.37□□□□□ -1.39
UBR4-202ENST00000375224 TRAV41A0A0B4J266 112 aa6.37□□□□□ -1.39
UBR4-202ENST00000375224 C17orf77Q96MU5 243 aa6.37□□□□□ -1.39
UBR4-202ENST00000375224 NPIPB6E9PJ23 425 aa6.37□□□□□ -1.39
UBR4-202ENST00000375224 H3BMG7 143 aa6.37□□□□□ -1.39
UBR4-202ENST00000375224 IGLV2-11P01706 119 aa6.37□□□□□ -1.39
UBR4-202ENST00000375224 IFITM1P13164 125 aa6.37□□□□□ -1.39
UBR4-202ENST00000375224 OR9G4Q8NGQ1 327 aa6.37□□□□□ -1.39
UBR4-202ENST00000375224 DUX5Q96PT3 197 aa6.37□□□□□ -1.39
UBR4-202ENST00000375224 AKAP6Q13023 2319 aa6.37□□□□□ -1.39
UBR4-202ENST00000375224 IGHV3OR16-10A0A075B7F0 116 aa6.37□□□□□ -1.39
UBR4-202ENST00000375224 FRMD6-AS1P0C7T7 363 aa6.37□□□□□ -1.39
UBR4-202ENST00000375224 XGP55808 180 aa6.37□□□□□ -1.39
UBR4-202ENST00000375224 Q6AWC8 147 aa6.37□□□□□ -1.39
UBR4-202ENST00000375224 RBPMS2Q6ZRY4 209 aaKnown RBP6.37□□□□□ -1.39
UBR4-202ENST00000375224 EPG5Q9HCE0 2579 aa6.36□□□□□ -1.39
UBR4-202ENST00000375224 TMEM262E9PQX1 116 aa6.36□□□□□ -1.39
UBR4-202ENST00000375224 G3V318 75 aa6.36□□□□□ -1.39
UBR4-202ENST00000375224 H3BUA1 57 aa6.36□□□□□ -1.39
UBR4-202ENST00000375224 FOXI1Q12951 378 aa6.36□□□□□ -1.39
UBR4-202ENST00000375224 TM4SF20Q53R12 229 aa6.36□□□□□ -1.39
UBR4-202ENST00000375224 DOPEY1Q5JWR5 2465 aa6.36□□□□□ -1.39
UBR4-202ENST00000375224 BRD3OSQ6XYD6 125 aa6.36□□□□□ -1.39
UBR4-202ENST00000375224 PIFOQ8TCI5 191 aa6.36□□□□□ -1.39
UBR4-202ENST00000375224 PRELID3AQ96N28 172 aa6.36□□□□□ -1.39
UBR4-202ENST00000375224 TM2D2Q9BX73 214 aa6.36□□□□□ -1.39
UBR4-202ENST00000375224 SIGLEC8Q9NYZ4 499 aa6.36□□□□□ -1.39
UBR4-202ENST00000375224 TRAV8-1A0A0A6YYK1 113 aa6.36□□□□□ -1.39
UBR4-202ENST00000375224 INSL3P51460 131 aa6.36□□□□□ -1.39
UBR4-202ENST00000375224 NDUFV3P56181 108 aaKnown RBP6.36□□□□□ -1.39
UBR4-202ENST00000375224 HBBP68871 147 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms