RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ANAPC10Q9UM13 185 aa9.86□□□□□ -0.83
NPLOC4-202ENST00000374747 SPTAN1Q13813 2472 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-202ENST00000374747 SOCS3O14543 225 aa9.86□□□□□ -0.83
NPLOC4-202ENST00000374747 MMP23AO75900 390 aa9.86□□□□□ -0.83
NPLOC4-202ENST00000374747 SLC25A16P16260 332 aa9.86□□□□□ -0.83
NPLOC4-202ENST00000374747 CEP295Q9C0D2 2601 aa9.86□□□□□ -0.83
NPLOC4-202ENST00000374747 PKDREJQ9NTG1 2253 aa9.86□□□□□ -0.83
NPLOC4-202ENST00000374747 H3BUX3 64 aa9.86□□□□□ -0.83
NPLOC4-202ENST00000374747 IGLV3-1P01715 115 aa9.86□□□□□ -0.83
NPLOC4-202ENST00000374747 COL8A2P25067 703 aa9.86□□□□□ -0.83
NPLOC4-202ENST00000374747 FAM231DQ6ZW35 169 aa9.86□□□□□ -0.83
NPLOC4-202ENST00000374747 C10orf142B7Z368 130 aa9.86□□□□□ -0.83
NPLOC4-202ENST00000374747 IGLL1P15814 213 aa9.86□□□□□ -0.83
NPLOC4-202ENST00000374747 SPANXDQ9BXN6 97 aa9.86□□□□□ -0.83
NPLOC4-202ENST00000374747 LGALS9BQ3B8N2 356 aa9.85□□□□□ -0.83
NPLOC4-202ENST00000374747 LGALS9CQ6DKI2 356 aa9.85□□□□□ -0.83
NPLOC4-202ENST00000374747 TMEM14BQ9NUH8 114 aa9.85□□□□□ -0.83
NPLOC4-202ENST00000374747 V9GYV3 84 aa9.85□□□□□ -0.83
NPLOC4-202ENST00000374747 IGHV1-24A0A0C4DH33 117 aa9.85□□□□□ -0.83
NPLOC4-202ENST00000374747 PAX9P55771 341 aa9.85□□□□□ -0.83
NPLOC4-202ENST00000374747 SS18Q15532 418 aa9.85□□□□□ -0.83
NPLOC4-202ENST00000374747 Q6ZR03 302 aa9.85□□□□□ -0.83
NPLOC4-202ENST00000374747 PMVKQ15126 192 aa9.85□□□□□ -0.83
NPLOC4-202ENST00000374747 ZNF726P1Q15940 193 aa9.85□□□□□ -0.83
NPLOC4-202ENST00000374747 NSUN5P1Q3KNT7 163 aa9.85□□□□□ -0.83
NPLOC4-202ENST00000374747 A0A1W2PNU3 283 aaPredicted RBP9.85□□□□□ -0.83
NPLOC4-202ENST00000374747 HS3ST6Q96QI5 342 aa9.85□□□□□ -0.83
NPLOC4-202ENST00000374747 NCOR1P1Q9H4R4 102 aa9.85□□□□□ -0.83
NPLOC4-202ENST00000374747 DAZ1Q9NQZ3 744 aaKnown RBP9.85□□□□□ -0.83
NPLOC4-202ENST00000374747 B4DSR2 109 aa9.84□□□□□ -0.83
NPLOC4-202ENST00000374747 C1QTNF4Q9BXJ3 329 aa9.84□□□□□ -0.83
NPLOC4-202ENST00000374747 SMIM27A0A1W2PRY6 76 aa9.84□□□□□ -0.83
NPLOC4-202ENST00000374747 C8orf49Q96NF6 230 aa9.84□□□□□ -0.83
NPLOC4-202ENST00000374747 NDUFB8O95169 186 aa9.84□□□□□ -0.83
NPLOC4-202ENST00000374747 LYPD2Q6UXB3 125 aa9.84□□□□□ -0.83
NPLOC4-202ENST00000374747 OR11H6Q8NGC7 330 aa9.84□□□□□ -0.83
NPLOC4-202ENST00000374747 TMEM131Q92545 1883 aa9.84□□□□□ -0.83
NPLOC4-202ENST00000374747 IGLV3-9A0A075B6K5 115 aa9.84□□□□□ -0.83
NPLOC4-202ENST00000374747 TRBV19A0A075B6N1 114 aa9.83□□□□□ -0.84
NPLOC4-202ENST00000374747 PIP4P2Q8N4L2 257 aa9.83□□□□□ -0.84
NPLOC4-202ENST00000374747 A0A1W2PPM0 123 aa9.83□□□□□ -0.84
NPLOC4-202ENST00000374747 MRPL51Q4U2R6 128 aaKnown RBP9.83□□□□□ -0.84
NPLOC4-202ENST00000374747 BVES-AS1Q5T3Y7 98 aa9.83□□□□□ -0.84
NPLOC4-202ENST00000374747 IL17RELQ6ZVW7 336 aa9.83□□□□□ -0.84
NPLOC4-202ENST00000374747 PRSS57Q6UWY2 283 aa9.83□□□□□ -0.84
NPLOC4-202ENST00000374747 BRD3OSQ6XYD6 125 aa9.83□□□□□ -0.84
NPLOC4-202ENST00000374747 RHODO00212 210 aa9.83□□□□□ -0.84
NPLOC4-202ENST00000374747 UTF1Q5T230 341 aa9.83□□□□□ -0.84
NPLOC4-202ENST00000374747 NDUFA4L2Q9NRX3 87 aa9.83□□□□□ -0.84
NPLOC4-202ENST00000374747 SSC4DQ8WTU2 575 aa9.82□□□□□ -0.84
NPLOC4-202ENST00000374747 OVOL3O00110 214 aa9.82□□□□□ -0.84
NPLOC4-202ENST00000374747 IFITM1P13164 125 aa9.82□□□□□ -0.84
NPLOC4-202ENST00000374747 WDR86Q86TI4 376 aa9.82□□□□□ -0.84
NPLOC4-202ENST00000374747 UBE2E2Q96LR5 201 aa9.82□□□□□ -0.84
NPLOC4-202ENST00000374747 FGF6P10767 208 aa9.82□□□□□ -0.84
NPLOC4-202ENST00000374747 RPL35AP18077 110 aaKnown RBP9.82□□□□□ -0.84
NPLOC4-202ENST00000374747 TAL2Q16559 108 aa9.82□□□□□ -0.84
NPLOC4-202ENST00000374747 ZNF114Q8NC26 417 aa9.81□□□□□ -0.84
NPLOC4-202ENST00000374747 ADAMTS9Q9P2N4 1935 aa9.81□□□□□ -0.84
NPLOC4-202ENST00000374747 GAGE12HA6NDE8 117 aa9.81□□□□□ -0.84
NPLOC4-202ENST00000374747 I3L3M4 83 aa9.81□□□□□ -0.84
NPLOC4-202ENST00000374747 ATP6V0BQ99437 205 aa9.81□□□□□ -0.84
NPLOC4-202ENST00000374747 MORN5Q5VZ52 161 aa9.81□□□□□ -0.84
NPLOC4-202ENST00000374747 CEND1Q8N111 149 aa9.81□□□□□ -0.84
NPLOC4-202ENST00000374747 K7EM74 188 aa9.81□□□□□ -0.84
NPLOC4-202ENST00000374747 UBL5Q9BZL1 73 aa9.81□□□□□ -0.84
NPLOC4-202ENST00000374747 LY6HO94772 140 aa9.8□□□□□ -0.84
NPLOC4-202ENST00000374747 BPESC1Q9GZL8 116 aa9.8□□□□□ -0.84
NPLOC4-202ENST00000374747 SIGLEC8Q9NYZ4 499 aa9.8□□□□□ -0.84
NPLOC4-202ENST00000374747 PRO1854Q9UHT4 67 aa9.8□□□□□ -0.84
NPLOC4-202ENST00000374747 FAM110DQ8TAY7 271 aaPredicted RBP9.8□□□□□ -0.84
NPLOC4-202ENST00000374747 CITED1Q99966 193 aa9.8□□□□□ -0.84
NPLOC4-202ENST00000374747 CITED2Q99967 270 aaPredicted RBP9.8□□□□□ -0.84
NPLOC4-202ENST00000374747 TACC2O95359 2948 aa9.8□□□□□ -0.84
NPLOC4-202ENST00000374747 MED13LQ71F56 2210 aa9.8□□□□□ -0.84
NPLOC4-202ENST00000374747 HLA-DRB4P13762 266 aa9.8□□□□□ -0.84
NPLOC4-202ENST00000374747 HLA-DRB4X5D2U9 266 aa9.8□□□□□ -0.84
NPLOC4-202ENST00000374747 ARHGAP21Q5T5U3 1957 aa9.8□□□□□ -0.84
NPLOC4-202ENST00000374747 TEX36Q5VZQ5 186 aa9.79□□□□□ -0.84
NPLOC4-202ENST00000374747 MRPL35Q9NZE8 188 aaKnown RBP9.79□□□□□ -0.84
NPLOC4-202ENST00000374747 SDHAF1A6NFY7 115 aa9.79□□□□□ -0.84
NPLOC4-202ENST00000374747 IGKV1-39P01597 117 aa9.79□□□□□ -0.84
NPLOC4-202ENST00000374747 IGKV1D-39P04432 117 aa9.79□□□□□ -0.84
NPLOC4-202ENST00000374747 C11orf52Q96A22 123 aa9.79□□□□□ -0.84
NPLOC4-202ENST00000374747 PRR25Q96S07 402 aa9.79□□□□□ -0.84
NPLOC4-202ENST00000374747 SIVA1O15304 175 aa9.79□□□□□ -0.84
NPLOC4-202ENST00000374747 SAA4P35542 130 aa9.79□□□□□ -0.84
NPLOC4-202ENST00000374747 F8VRH5 84 aa9.79□□□□□ -0.84
NPLOC4-202ENST00000374747 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.79□□□□□ -0.84
NPLOC4-202ENST00000374747 RBMY1FQ15415 496 aaKnown RBP9.79□□□□□ -0.84
NPLOC4-202ENST00000374747 TMEM14CQ9P0S9 112 aa9.79□□□□□ -0.84
NPLOC4-202ENST00000374747 SP5Q6BEB4 398 aaPredicted RBP9.78□□□□□ -0.84
NPLOC4-202ENST00000374747 ZNRD1Q9P1U0 126 aa9.78□□□□□ -0.84
NPLOC4-202ENST00000374747 CPAMD8Q8IZJ3 1885 aa9.78□□□□□ -0.84
NPLOC4-202ENST00000374747 NUP210LQ5VU65 1888 aa9.78□□□□□ -0.84
NPLOC4-202ENST00000374747 DEFB131AP59861 70 aa9.78□□□□□ -0.84
NPLOC4-202ENST00000374747 KLHL30-AS1Q8NEE0 82 aa9.78□□□□□ -0.84
NPLOC4-202ENST00000374747 KNCNA6PVL3 124 aa9.78□□□□□ -0.84
NPLOC4-202ENST00000374747 NDUFA12Q9UI09 145 aa9.78□□□□□ -0.84
NPLOC4-202ENST00000374747 H3BMG7 143 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms