RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 TAS2R60P59551 318 aa8.2□□□□□ -1.1
HSPG2-202ENST00000374676 RRN3P1Q2M238 152 aa8.2□□□□□ -1.1
HSPG2-202ENST00000374676 PRR9Q5T870 116 aa8.2□□□□□ -1.1
HSPG2-202ENST00000374676 C2CD4CQ8TF44 421 aa8.2□□□□□ -1.1
HSPG2-202ENST00000374676 FMC1Q96HJ9 113 aa8.2□□□□□ -1.1
HSPG2-202ENST00000374676 NIPSNAP3BQ9BS92 247 aa8.2□□□□□ -1.1
HSPG2-202ENST00000374676 NDFIP1Q9BT67 221 aa8.2□□□□□ -1.1
HSPG2-202ENST00000374676 TREM1Q9NP99 234 aa8.2□□□□□ -1.1
HSPG2-202ENST00000374676 VAX2Q9UIW0 290 aa8.2□□□□□ -1.1
HSPG2-202ENST00000374676 TRAV34A0A0B4J273 112 aa8.19□□□□□ -1.1
HSPG2-202ENST00000374676 IGHV4-28A0A0C4DH34 117 aa8.19□□□□□ -1.1
HSPG2-202ENST00000374676 A0A0J9YWU9 116 aa8.19□□□□□ -1.1
HSPG2-202ENST00000374676 LOC102723971A0A1B0GUV8 181 aa8.19□□□□□ -1.1
HSPG2-202ENST00000374676 TMEM189A5PLL7 270 aa8.19□□□□□ -1.1
HSPG2-202ENST00000374676 RBFOX3A6NFN3 312 aa8.19□□□□□ -1.1
HSPG2-202ENST00000374676 AKR1C3P42330 323 aa8.19□□□□□ -1.1
HSPG2-202ENST00000374676 BTN1A1Q13410 526 aa8.19□□□□□ -1.1
HSPG2-202ENST00000374676 TMEM183BQ1AE95 376 aa8.19□□□□□ -1.1
HSPG2-202ENST00000374676 Q6AWC8 147 aa8.19□□□□□ -1.1
HSPG2-202ENST00000374676 PRNTQ86SH4 94 aa8.19□□□□□ -1.1
HSPG2-202ENST00000374676 C11orf52Q96A22 123 aa8.19□□□□□ -1.1
HSPG2-202ENST00000374676 WWC2-AS2Q96NR7 200 aa8.19□□□□□ -1.1
HSPG2-202ENST00000374676 PYGO2Q9BRQ0 406 aa8.19□□□□□ -1.1
HSPG2-202ENST00000374676 LINC00467Q9BRT7 94 aa8.19□□□□□ -1.1
HSPG2-202ENST00000374676 ZFP30Q9Y2G7 519 aa8.19□□□□□ -1.1
HSPG2-202ENST00000374676 SCO2A0A1W2PP80 73 aa8.18□□□□□ -1.1
HSPG2-202ENST00000374676 ZNF705GA8MUZ8 300 aaPredicted RBP8.18□□□□□ -1.1
HSPG2-202ENST00000374676 PDE6DO43924 150 aa8.18□□□□□ -1.1
HSPG2-202ENST00000374676 NDUFS6O75380 124 aaKnown RBP8.18□□□□□ -1.1
HSPG2-202ENST00000374676 UBE2G1P62253 170 aa8.18□□□□□ -1.1
HSPG2-202ENST00000374676 SMUG1Q53HV7 270 aa8.18□□□□□ -1.1
HSPG2-202ENST00000374676 ZNF493Q6ZR52 646 aa8.18□□□□□ -1.1
HSPG2-202ENST00000374676 COX8CQ7Z4L0 72 aa8.18□□□□□ -1.1
HSPG2-202ENST00000374676 Q86TA4 180 aa8.18□□□□□ -1.1
HSPG2-202ENST00000374676 TRAV21A0A0B4J279 112 aa8.17□□□□□ -1.1
HSPG2-202ENST00000374676 LTAP01374 205 aa8.17□□□□□ -1.1
HSPG2-202ENST00000374676 ANXA2RQ3ZCQ2 193 aa8.17□□□□□ -1.1
HSPG2-202ENST00000374676 ZNF506Q5JVG8 444 aa8.17□□□□□ -1.1
HSPG2-202ENST00000374676 ZNF767PQ75MW2 155 aa8.17□□□□□ -1.1
HSPG2-202ENST00000374676 EIF4E3Q8N5X7 224 aaKnown RBP8.17□□□□□ -1.1
HSPG2-202ENST00000374676 FAM210AQ96ND0 272 aa8.17□□□□□ -1.1
HSPG2-202ENST00000374676 C8orf49Q96NF6 230 aa8.17□□□□□ -1.1
HSPG2-202ENST00000374676 IGHV1OR15-1A0A075B7D0 117 aa8.16□□□□□ -1.1
HSPG2-202ENST00000374676 DEFB4AO15263 64 aa8.16□□□□□ -1.1
HSPG2-202ENST00000374676 GCGP01275 180 aa8.16□□□□□ -1.1
HSPG2-202ENST00000374676 PRM2P04554 102 aa8.16□□□□□ -1.1
HSPG2-202ENST00000374676 AZU1P20160 251 aa8.16□□□□□ -1.1
HSPG2-202ENST00000374676 RPL35P42766 123 aaKnown RBP8.16□□□□□ -1.1
HSPG2-202ENST00000374676 IFITM2Q01629 132 aa8.16□□□□□ -1.1
HSPG2-202ENST00000374676 Q6ZQT7 251 aa8.16□□□□□ -1.1
HSPG2-202ENST00000374676 PCNPQ8WW12 178 aaKnown RBP8.16□□□□□ -1.1
HSPG2-202ENST00000374676 TMEM250H0YL14 139 aa8.15□□□□□ -1.1
HSPG2-202ENST00000374676 RGS13O14921 159 aa8.15□□□□□ -1.1
HSPG2-202ENST00000374676 PFN1P07737 140 aaKnown RBP8.15□□□□□ -1.1
HSPG2-202ENST00000374676 HTN1P15515 57 aa8.15□□□□□ -1.1
HSPG2-202ENST00000374676 ZNF80P51504 273 aaPredicted RBP8.15□□□□□ -1.1
HSPG2-202ENST00000374676 RAB14P61106 215 aa8.15□□□□□ -1.1
HSPG2-202ENST00000374676 TDRG1Q3Y452 100 aa8.15□□□□□ -1.1
HSPG2-202ENST00000374676 BAGE2Q86Y30 109 aa8.15□□□□□ -1.1
HSPG2-202ENST00000374676 TMEM183AQ8IXX5 376 aa8.15□□□□□ -1.1
HSPG2-202ENST00000374676 IL17DQ8TAD2 202 aa8.15□□□□□ -1.1
HSPG2-202ENST00000374676 RNASE8Q8TDE3 154 aaKnown RBP8.15□□□□□ -1.1
HSPG2-202ENST00000374676 TMEM263Q8WUH6 116 aaKnown RBP8.15□□□□□ -1.1
HSPG2-202ENST00000374676 C16orf74Q96GX8 76 aa8.15□□□□□ -1.1
HSPG2-202ENST00000374676 MLST8Q9BVC4 326 aa8.15□□□□□ -1.1
HSPG2-202ENST00000374676 MED9Q9NWA0 146 aa8.15□□□□□ -1.1
HSPG2-202ENST00000374676 CSMD3Q7Z407 3707 aa8.15□□□□□ -1.1
HSPG2-202ENST00000374676 TENM2Q9NT68 2774 aa8.15□□□□□ -1.11
HSPG2-202ENST00000374676 PLAC8L1A1L4L8 177 aa8.14□□□□□ -1.11
HSPG2-202ENST00000374676 FABP5P3A8MUU1 101 aa8.14□□□□□ -1.11
HSPG2-202ENST00000374676 TOR2AQ5JU69 321 aa8.14□□□□□ -1.11
HSPG2-202ENST00000374676 FAM159AQ6UWV7 190 aa8.14□□□□□ -1.11
HSPG2-202ENST00000374676 C11orf45Q8TAV5 145 aa8.14□□□□□ -1.11
HSPG2-202ENST00000374676 DERL1Q9BUN8 251 aa8.14□□□□□ -1.11
HSPG2-202ENST00000374676 EIF5A2Q9GZV4 153 aaKnown RBP8.14□□□□□ -1.11
HSPG2-202ENST00000374676 DKK2Q9UBU2 259 aa8.14□□□□□ -1.11
HSPG2-202ENST00000374676 TEX48A0A1B0GUV7 120 aa8.13□□□□□ -1.11
HSPG2-202ENST00000374676 CXorf65A6NEN9 183 aa8.13□□□□□ -1.11
HSPG2-202ENST00000374676 CBY3A6NI87 242 aa8.13□□□□□ -1.11
HSPG2-202ENST00000374676 LYRM9A8MSI8 78 aa8.13□□□□□ -1.11
HSPG2-202ENST00000374676 SPART-AS1P0CW21 52 aa8.13□□□□□ -1.11
HSPG2-202ENST00000374676 CRIP1P50238 77 aa8.13□□□□□ -1.11
HSPG2-202ENST00000374676 EMP1P54849 157 aa8.13□□□□□ -1.11
HSPG2-202ENST00000374676 ZNF674Q2M3X9 581 aa8.13□□□□□ -1.11
HSPG2-202ENST00000374676 C11orf72Q8NBR9 251 aa8.13□□□□□ -1.11
HSPG2-202ENST00000374676 ZC2HC1AQ96GY0 325 aa8.13□□□□□ -1.11
HSPG2-202ENST00000374676 KCNS1Q96KK3 526 aa8.13□□□□□ -1.11
HSPG2-202ENST00000374676 SMDT1Q9H4I9 107 aa8.13□□□□□ -1.11
HSPG2-202ENST00000374676 TP53TG3Q9ULZ0 132 aa8.13□□□□□ -1.11
HSPG2-202ENST00000374676 TIMM8BQ9Y5J9 83 aaPredicted RBP8.13□□□□□ -1.11
HSPG2-202ENST00000374676 DYNC2H1Q8NCM8 4307 aaKnown RBP8.13□□□□□ -1.11
HSPG2-202ENST00000374676 RAB19A4D1S5 217 aa8.12□□□□□ -1.11
HSPG2-202ENST00000374676 SRP19P09132 144 aaKnown RBP8.12□□□□□ -1.11
HSPG2-202ENST00000374676 DAZ2Q13117 558 aaKnown RBP8.12□□□□□ -1.11
HSPG2-202ENST00000374676 CLLU1Q5K131 121 aa8.12□□□□□ -1.11
HSPG2-202ENST00000374676 MUC21Q5SSG8 566 aa8.12□□□□□ -1.11
HSPG2-202ENST00000374676 IBA57Q5T440 356 aaKnown RBP8.12□□□□□ -1.11
HSPG2-202ENST00000374676 FAM162BQ5T6X4 162 aa8.12□□□□□ -1.11
HSPG2-202ENST00000374676 FAM222AQ5U5X8 452 aa8.12□□□□□ -1.11
HSPG2-202ENST00000374676 MUC7Q8TAX7 377 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms