RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 K7EQD1 137 aa9.32□□□□□ -0.92
CXCL12-202ENST00000374426 SMR3BP02814 79 aaPredicted RBP9.32□□□□□ -0.92
CXCL12-202ENST00000374426 SFTA3P0C7M3 94 aa9.32□□□□□ -0.92
CXCL12-202ENST00000374426 S100A10P60903 97 aa9.32□□□□□ -0.92
CXCL12-202ENST00000374426 HBG1P69891 147 aa9.32□□□□□ -0.92
CXCL12-202ENST00000374426 HBG2P69892 147 aa9.32□□□□□ -0.92
CXCL12-202ENST00000374426 ZNF415Q09FC8 603 aa9.32□□□□□ -0.92
CXCL12-202ENST00000374426 STX12Q86Y82 276 aa9.32□□□□□ -0.92
CXCL12-202ENST00000374426 Q8TAT8 98 aa9.32□□□□□ -0.92
CXCL12-202ENST00000374426 ZNF479Q96JC4 524 aa9.32□□□□□ -0.92
CXCL12-202ENST00000374426 NPCDR1Q9BY65 106 aa9.32□□□□□ -0.92
CXCL12-202ENST00000374426 MDFICQ9P1T7 246 aa9.32□□□□□ -0.92
CXCL12-202ENST00000374426 DNAH8Q96JB1 4490 aa9.32□□□□□ -0.92
CXCL12-202ENST00000374426 TRAV6A0A075B6T7 132 aa9.31□□□□□ -0.92
CXCL12-202ENST00000374426 TRGV4A0A0C4DH28 118 aa9.31□□□□□ -0.92
CXCL12-202ENST00000374426 K7EP13 123 aa9.31□□□□□ -0.92
CXCL12-202ENST00000374426 TCRBP04435 133 aa9.31□□□□□ -0.92
CXCL12-202ENST00000374426 NBEAP1P0C6P0 100 aa9.31□□□□□ -0.92
CXCL12-202ENST00000374426 SRIP30626 198 aa9.31□□□□□ -0.92
CXCL12-202ENST00000374426 ZNF138P52744 262 aa9.31□□□□□ -0.92
CXCL12-202ENST00000374426 RAB32Q13637 225 aa9.31□□□□□ -0.92
CXCL12-202ENST00000374426 ATP6V1FQ16864 119 aa9.31□□□□□ -0.92
CXCL12-202ENST00000374426 MIR17HGQ75NE6 70 aa9.31□□□□□ -0.92
CXCL12-202ENST00000374426 IQCF2Q8IXL9 164 aa9.31□□□□□ -0.92
CXCL12-202ENST00000374426 GPN1Q9HCN4 374 aaPredicted RBP9.31□□□□□ -0.92
CXCL12-202ENST00000374426 NUDT15Q9NV35 164 aa9.31□□□□□ -0.92
CXCL12-202ENST00000374426 TRBV7-9A0A0J9YWB2 115 aa9.3□□□□□ -0.92
CXCL12-202ENST00000374426 LYRM1O43325 122 aa9.3□□□□□ -0.92
CXCL12-202ENST00000374426 GYPEP15421 78 aa9.3□□□□□ -0.92
CXCL12-202ENST00000374426 EVI2AP22794 236 aa9.3□□□□□ -0.92
CXCL12-202ENST00000374426 GCSHP23434 173 aa9.3□□□□□ -0.92
CXCL12-202ENST00000374426 MUC21Q5SSG8 566 aa9.3□□□□□ -0.92
CXCL12-202ENST00000374426 OR10G4Q8NGN3 311 aa9.3□□□□□ -0.92
CXCL12-202ENST00000374426 THAP6Q8TBB0 222 aa9.3□□□□□ -0.92
CXCL12-202ENST00000374426 RASL10AQ92737 203 aa9.3□□□□□ -0.92
CXCL12-202ENST00000374426 PHYHIPLQ96FC7 376 aa9.3□□□□□ -0.92
CXCL12-202ENST00000374426 OR10J4P0C629 311 aa9.29□□□□□ -0.92
CXCL12-202ENST00000374426 HAMPP81172 84 aa9.29□□□□□ -0.92
CXCL12-202ENST00000374426 ZNF266Q14584 549 aa9.29□□□□□ -0.92
CXCL12-202ENST00000374426 FXYD5Q96DB9 178 aa9.29□□□□□ -0.92
CXCL12-202ENST00000374426 OR51M1Q9H341 326 aa9.29□□□□□ -0.92
CXCL12-202ENST00000374426 ORM1P02763 201 aa9.28□□□□□ -0.92
CXCL12-202ENST00000374426 CRYGDP07320 174 aa9.28□□□□□ -0.92
CXCL12-202ENST00000374426 NHLH2Q02577 135 aa9.28□□□□□ -0.92
CXCL12-202ENST00000374426 PCNPQ8WW12 178 aaKnown RBP9.28□□□□□ -0.92
CXCL12-202ENST00000374426 PAXXQ9BUH6 204 aa9.28□□□□□ -0.92
CXCL12-202ENST00000374426 RBAKDNA6NC62 111 aa9.27□□□□□ -0.93
CXCL12-202ENST00000374426 TMEM183BQ1AE95 376 aa9.27□□□□□ -0.93
CXCL12-202ENST00000374426 Q6AWC8 147 aa9.27□□□□□ -0.93
CXCL12-202ENST00000374426 TMEM183AQ8IXX5 376 aa9.27□□□□□ -0.93
CXCL12-202ENST00000374426 OR5C1Q8NGR4 320 aa9.27□□□□□ -0.93
CXCL12-202ENST00000374426 TXNDC17Q9BRA2 123 aa9.27□□□□□ -0.93
CXCL12-202ENST00000374426 SPXQ9BT56 116 aa9.27□□□□□ -0.93
CXCL12-202ENST00000374426 LRCOL1A6NCL2 159 aa9.26□□□□□ -0.93
CXCL12-202ENST00000374426 C9JCJ5 164 aa9.26□□□□□ -0.93
CXCL12-202ENST00000374426 FAM229AH3BQW9 127 aa9.26□□□□□ -0.93
CXCL12-202ENST00000374426 RANP62826 216 aaKnown RBP9.26□□□□□ -0.93
CXCL12-202ENST00000374426 C10orf126Q8N4M7 172 aa9.26□□□□□ -0.93
CXCL12-202ENST00000374426 SLC25A31Q9H0C2 315 aa9.26□□□□□ -0.93
CXCL12-202ENST00000374426 TRGV11A0A075B6L2 103 aa9.25□□□□□ -0.93
CXCL12-202ENST00000374426 IGLV5-52A0A0A0MRZ9 124 aa9.25□□□□□ -0.93
CXCL12-202ENST00000374426 TRAV4A0A0B4J268 109 aa9.25□□□□□ -0.93
CXCL12-202ENST00000374426 LOC100131303A0A0U1RQF7 123 aa9.25□□□□□ -0.93
CXCL12-202ENST00000374426 H2AFB2P0C5Z0 115 aa9.25□□□□□ -0.93
CXCL12-202ENST00000374426 CSN1S1P47710 185 aa9.25□□□□□ -0.93
CXCL12-202ENST00000374426 FAM159AQ6UWV7 190 aa9.25□□□□□ -0.93
CXCL12-202ENST00000374426 Q6ZSN1 163 aa9.25□□□□□ -0.93
CXCL12-202ENST00000374426 TMEM70Q9BUB7 260 aa9.25□□□□□ -0.93
CXCL12-202ENST00000374426 OR7C2O60412 319 aa9.24□□□□□ -0.93
CXCL12-202ENST00000374426 TDRG1Q3Y452 100 aa9.24□□□□□ -0.93
CXCL12-202ENST00000374426 OR4C5Q8NGB2 326 aa9.24□□□□□ -0.93
CXCL12-202ENST00000374426 NTN5Q8WTR8 489 aaPredicted RBP9.24□□□□□ -0.93
CXCL12-202ENST00000374426 WDR61Q9GZS3 305 aaKnown RBP9.24□□□□□ -0.93
CXCL12-202ENST00000374426 LENEPQ9Y5L5 61 aa9.24□□□□□ -0.93
CXCL12-202ENST00000374426 IGHV3-38A0A0C4DH36 116 aa9.23□□□□□ -0.93
CXCL12-202ENST00000374426 DIRC3C9JPN6 131 aa9.23□□□□□ -0.93
CXCL12-202ENST00000374426 GNRH2O43555 120 aa9.23□□□□□ -0.93
CXCL12-202ENST00000374426 PSCAO43653 123 aa9.23□□□□□ -0.93
CXCL12-202ENST00000374426 TIRAPP58753 221 aa9.23□□□□□ -0.93
CXCL12-202ENST00000374426 UBE2L3P68036 154 aaKnown RBP9.23□□□□□ -0.93
CXCL12-202ENST00000374426 KCNIP2Q9NS61 270 aa9.23□□□□□ -0.93
CXCL12-202ENST00000374426 NAGKQ9UJ70 344 aa9.23□□□□□ -0.93
CXCL12-202ENST00000374426 IGHV3-16A0A0C4DH30 117 aa9.22□□□□□ -0.93
CXCL12-202ENST00000374426 IBA57-AS1B1ANH7 110 aa9.22□□□□□ -0.93
CXCL12-202ENST00000374426 M0R2P5 195 aa9.22□□□□□ -0.93
CXCL12-202ENST00000374426 GATA1P15976 413 aaPredicted RBP9.22□□□□□ -0.93
CXCL12-202ENST00000374426 LINC01556Q5JQF7 62 aa9.22□□□□□ -0.93
CXCL12-202ENST00000374426 SH2D6Q7Z4S9 175 aa9.22□□□□□ -0.93
CXCL12-202ENST00000374426 Q8N814 137 aa9.22□□□□□ -0.93
CXCL12-202ENST00000374426 NHLRC2Q8NBF2 726 aa9.22□□□□□ -0.93
CXCL12-202ENST00000374426 TMED6Q8WW62 240 aa9.22□□□□□ -0.93
CXCL12-202ENST00000374426 OR5AC2Q9NZP5 309 aa9.22□□□□□ -0.93
CXCL12-202ENST00000374426 FAM30AQ9NZY2 134 aa9.22□□□□□ -0.93
CXCL12-202ENST00000374426 H0YIZ8 118 aa9.21□□□□□ -0.94
CXCL12-202ENST00000374426 SIX6O95475 246 aa9.21□□□□□ -0.94
CXCL12-202ENST00000374426 PPT1P50897 306 aa9.21□□□□□ -0.94
CXCL12-202ENST00000374426 FAM240BA0A1B0GVZ2 78 aa9.2□□□□□ -0.94
CXCL12-202ENST00000374426 C17orf112F2Z3M2 114 aa9.2□□□□□ -0.94
CXCL12-202ENST00000374426 LRRC37A5PQ49AS3 106 aa9.2□□□□□ -0.94
CXCL12-202ENST00000374426 HYLS1Q96M11 299 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms