RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 FAM231CP0DMU5 169 aa14.08□□□□□ -0.16
TMEM53-205ENST00000372244 Q6AWC8 147 aa14.08□□□□□ -0.16
TMEM53-205ENST00000372244 TVP23CQ96ET8 276 aa14.08□□□□□ -0.16
TMEM53-205ENST00000372244 ARPC5LQ9BPX5 153 aa14.08□□□□□ -0.16
TMEM53-205ENST00000372244 A0A0D9SG52 128 aa14.07□□□□□ -0.16
TMEM53-205ENST00000372244 F5H768 121 aa14.07□□□□□ -0.16
TMEM53-205ENST00000372244 RGS13O14921 159 aa14.07□□□□□ -0.16
TMEM53-205ENST00000372244 SUMO1P63165 101 aaKnown RBP14.07□□□□□ -0.16
TMEM53-205ENST00000372244 GNG5P63218 68 aa14.07□□□□□ -0.16
TMEM53-205ENST00000372244 AKR1C8PQ5T2L2 129 aa14.07□□□□□ -0.16
TMEM53-205ENST00000372244 POM121L12Q8N7R1 296 aa14.07□□□□□ -0.16
TMEM53-205ENST00000372244 C5orf17Q8NAS9 161 aa14.07□□□□□ -0.16
TMEM53-205ENST00000372244 TP53TG3Q9ULZ0 132 aa14.07□□□□□ -0.16
TMEM53-205ENST00000372244 DNAH6Q9C0G6 4158 aa14.06□□□□□ -0.16
TMEM53-205ENST00000372244 TRAV8-1A0A0A6YYK1 113 aa14.06□□□□□ -0.16
TMEM53-205ENST00000372244 SERTM2A0A1B0GWG4 89 aa14.06□□□□□ -0.16
TMEM53-205ENST00000372244 A0A1W2PRE2 83 aa14.06□□□□□ -0.16
TMEM53-205ENST00000372244 IBA57Q5T440 356 aaKnown RBP14.06□□□□□ -0.16
TMEM53-205ENST00000372244 EPDR1Q9UM22 224 aa14.06□□□□□ -0.16
TMEM53-205ENST00000372244 RPH3ALQ9UNE2 315 aa14.06□□□□□ -0.16
TMEM53-205ENST00000372244 EPPK1P58107 5090 aaKnown RBP14.06□□□□□ -0.16
TMEM53-205ENST00000372244 GGTLC3B5MD39 225 aa14.06□□□□□ -0.16
TMEM53-205ENST00000372244 TCRAP04437 139 aa14.06□□□□□ -0.16
TMEM53-205ENST00000372244 Q6ZTI0 123 aa14.06□□□□□ -0.16
TMEM53-205ENST00000372244 C15orf53Q8NAA6 179 aa14.06□□□□□ -0.16
TMEM53-205ENST00000372244 C18orf15Q96N68 181 aa14.06□□□□□ -0.16
TMEM53-205ENST00000372244 KLF12Q9Y4X4 402 aa14.06□□□□□ -0.16
TMEM53-205ENST00000372244 GAGE12BA1L429 117 aa14.05□□□□□ -0.16
TMEM53-205ENST00000372244 GAGE7O76087 117 aa14.05□□□□□ -0.16
TMEM53-205ENST00000372244 GAGE12FP0CL80 117 aa14.05□□□□□ -0.16
TMEM53-205ENST00000372244 GAGE12GP0CL81 117 aa14.05□□□□□ -0.16
TMEM53-205ENST00000372244 GAGE12IP0CL82 117 aa14.05□□□□□ -0.16
TMEM53-205ENST00000372244 TCL1AP56279 114 aa14.05□□□□□ -0.16
TMEM53-205ENST00000372244 TMPRSS5Q9H3S3 457 aa14.05□□□□□ -0.16
TMEM53-205ENST00000372244 SPINK4O60575 86 aa14.04□□□□□ -0.16
TMEM53-205ENST00000372244 IGLV2-11P01706 119 aa14.04□□□□□ -0.16
TMEM53-205ENST00000372244 Q6ZNX1 250 aa14.04□□□□□ -0.16
TMEM53-205ENST00000372244 SEC11BP0C7V7 166 aa14.03□□□□□ -0.16
TMEM53-205ENST00000372244 TDRG1Q3Y452 100 aa14.03□□□□□ -0.16
TMEM53-205ENST00000372244 RNF212Q495C1 297 aa14.03□□□□□ -0.16
TMEM53-205ENST00000372244 TREM1Q9NP99 234 aa14.03□□□□□ -0.16
TMEM53-205ENST00000372244 LGALS9BQ3B8N2 356 aa14.02□□□□□ -0.16
TMEM53-205ENST00000372244 SGK494Q96LW2 274 aa14.02□□□□□ -0.16
TMEM53-205ENST00000372244 BCL2L11O43521 198 aa14.01□□□□□ -0.17
TMEM53-205ENST00000372244 HOXA5P20719 270 aa14.01□□□□□ -0.17
TMEM53-205ENST00000372244 FHITP49789 147 aa14.01□□□□□ -0.17
TMEM53-205ENST00000372244 FGF8P55075 233 aaPredicted RBP14.01□□□□□ -0.17
TMEM53-205ENST00000372244 MUC21Q5SSG8 566 aa14.01□□□□□ -0.17
TMEM53-205ENST00000372244 IQCF2Q8IXL9 164 aa14.01□□□□□ -0.17
TMEM53-205ENST00000372244 NKX6-2Q9C056 277 aaPredicted RBP14.01□□□□□ -0.17
TMEM53-205ENST00000372244 MDFICQ9P1T7 246 aa14.01□□□□□ -0.17
TMEM53-205ENST00000372244 FRAS1Q86XX4 4008 aa14.01□□□□□ -0.17
TMEM53-205ENST00000372244 TRGV1A0A0A0MS02 117 aa14□□□□□ -0.17
TMEM53-205ENST00000372244 K7EQM0 130 aa14□□□□□ -0.17
TMEM53-205ENST00000372244 TMUB2Q71RG4 321 aa14□□□□□ -0.17
TMEM53-205ENST00000372244 CYB561D1Q8N8Q1 229 aa14□□□□□ -0.17
TMEM53-205ENST00000372244 ATG101Q9BSB4 218 aa14□□□□□ -0.17
TMEM53-205ENST00000372244 ZNF471Q9BX82 626 aaPredicted RBP14□□□□□ -0.17
TMEM53-205ENST00000372244 PSG8Q9UQ74 426 aa14□□□□□ -0.17
TMEM53-205ENST00000372244 TRAV21A0A0B4J279 112 aa13.99□□□□□ -0.17
TMEM53-205ENST00000372244 KANTRA0A1W2PQU2 76 aa13.99□□□□□ -0.17
TMEM53-205ENST00000372244 MAP1LC3B2A6NCE7 125 aa13.99□□□□□ -0.17
TMEM53-205ENST00000372244 FAM74A7A6NL05 159 aa13.99□□□□□ -0.17
TMEM53-205ENST00000372244 UMAD1C9J7I0 102 aa13.99□□□□□ -0.17
TMEM53-205ENST00000372244 OR5I1Q13606 314 aa13.99□□□□□ -0.17
TMEM53-205ENST00000372244 FAM159AQ6UWV7 190 aa13.99□□□□□ -0.17
TMEM53-205ENST00000372244 TCTE3Q8IZS6 198 aa13.99□□□□□ -0.17
TMEM53-205ENST00000372244 TMEM75Q8N9X5 138 aa13.99□□□□□ -0.17
TMEM53-205ENST00000372244 MAP1LC3BQ9GZQ8 125 aa13.99□□□□□ -0.17
TMEM53-205ENST00000372244 MUC4Q99102 2169 aa13.99□□□□□ -0.17
TMEM53-205ENST00000372244 TRGV2A0A075B6R0 118 aa13.99□□□□□ -0.17
TMEM53-205ENST00000372244 FBLL1A6NHQ2 334 aaKnown RBP13.99□□□□□ -0.17
TMEM53-205ENST00000372244 MBD3L1Q8WWY6 194 aa13.99□□□□□ -0.17
TMEM53-205ENST00000372244 DNAH10Q8IVF4 4471 aa13.98□□□□□ -0.17
TMEM53-205ENST00000372244 TRAV26-1A0A087WT03 109 aa13.98□□□□□ -0.17
TMEM53-205ENST00000372244 F6UZH7 168 aa13.98□□□□□ -0.17
TMEM53-205ENST00000372244 UBE2G2P60604 165 aa13.98□□□□□ -0.17
TMEM53-205ENST00000372244 FLI1Q01543 452 aaPredicted RBP13.98□□□□□ -0.17
TMEM53-205ENST00000372244 ZNF415Q09FC8 603 aa13.98□□□□□ -0.17
TMEM53-205ENST00000372244 TMEM183BQ1AE95 376 aa13.98□□□□□ -0.17
TMEM53-205ENST00000372244 TMEM183AQ8IXX5 376 aa13.98□□□□□ -0.17
TMEM53-205ENST00000372244 LINC00479Q96M42 142 aa13.98□□□□□ -0.17
TMEM53-205ENST00000372244 NDFIP1Q9BT67 221 aa13.98□□□□□ -0.17
TMEM53-205ENST00000372244 H3BNG1 76 aa13.97□□□□□ -0.17
TMEM53-205ENST00000372244 GNRH2O43555 120 aa13.97□□□□□ -0.17
TMEM53-205ENST00000372244 NUDT3O95989 172 aa13.97□□□□□ -0.17
TMEM53-205ENST00000372244 ZNF80P51504 273 aaPredicted RBP13.97□□□□□ -0.17
TMEM53-205ENST00000372244 EIF5AP63241 154 aaKnown RBP13.97□□□□□ -0.17
TMEM53-205ENST00000372244 RASL10AQ92737 203 aa13.97□□□□□ -0.17
TMEM53-205ENST00000372244 C8orf49Q96NF6 230 aa13.97□□□□□ -0.17
TMEM53-205ENST00000372244 TRGV11A0A075B6L2 103 aa13.96□□□□□ -0.17
TMEM53-205ENST00000372244 IFNA7P01567 189 aa13.96□□□□□ -0.17
TMEM53-205ENST00000372244 FAM3BP58499 235 aaPredicted RBP13.96□□□□□ -0.17
TMEM53-205ENST00000372244 LGALSLQ3ZCW2 172 aaPredicted RBP13.96□□□□□ -0.17
TMEM53-205ENST00000372244 SAPCD1Q5SSQ6 148 aa13.96□□□□□ -0.17
TMEM53-205ENST00000372244 PRNTQ86SH4 94 aa13.96□□□□□ -0.17
TMEM53-205ENST00000372244 STOML3Q8TAV4 291 aa13.96□□□□□ -0.17
TMEM53-205ENST00000372244 SPXQ9BT56 116 aa13.96□□□□□ -0.17
TMEM53-205ENST00000372244 DPPA3Q6W0C5 159 aa13.95□□□□□ -0.18
TMEM53-205ENST00000372244 UBE2DNLQ8IWF7 75 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms