RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 LINC00205P59089 165 aa10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 TEX43Q6ZNM6 134 aa10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 A0A0B4J2C4 111 aa10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 A0A0U1RRA0 63 aa10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 RNF138Q8WVD3 245 aa10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 ZNF524Q96C55 264 aa10.67□□□□□ -0.7
RAPGEF1-201ENST00000372189 LTBP2Q14767 1821 aa10.66□□□□□ -0.7
RAPGEF1-201ENST00000372189 LINC01619G3V211 115 aa10.66□□□□□ -0.7
RAPGEF1-201ENST00000372189 ATP6V0E1O15342 81 aa10.66□□□□□ -0.7
RAPGEF1-201ENST00000372189 IGKV1-16P04430 117 aa10.66□□□□□ -0.7
RAPGEF1-201ENST00000372189 LOXP28300 417 aaPredicted RBP10.66□□□□□ -0.7
RAPGEF1-201ENST00000372189 ZNRD1Q9P1U0 126 aa10.66□□□□□ -0.7
RAPGEF1-201ENST00000372189 HERVK_113P63121 156 aa10.66□□□□□ -0.7
RAPGEF1-201ENST00000372189 DEFB113Q30KQ7 82 aa10.66□□□□□ -0.7
RAPGEF1-201ENST00000372189 RASL10AQ92737 203 aa10.66□□□□□ -0.7
RAPGEF1-201ENST00000372189 RHPN1-AS1Q9BWJ2 59 aa10.66□□□□□ -0.7
RAPGEF1-201ENST00000372189 COL6A6A6NMZ7 2263 aa10.66□□□□□ -0.7
RAPGEF1-201ENST00000372189 ZNF876PQ49A33 203 aa10.66□□□□□ -0.7
RAPGEF1-201ENST00000372189 NEGR1Q7Z3B1 354 aa10.66□□□□□ -0.7
RAPGEF1-201ENST00000372189 MCRIP2Q9BUT9 160 aaKnown RBP10.66□□□□□ -0.7
RAPGEF1-201ENST00000372189 DAZ1Q9NQZ3 744 aaKnown RBP10.66□□□□□ -0.7
RAPGEF1-201ENST00000372189 Q8TAT8 98 aa10.66□□□□□ -0.7
RAPGEF1-201ENST00000372189 FAM110DQ8TAY7 271 aaPredicted RBP10.66□□□□□ -0.7
RAPGEF1-201ENST00000372189 SMKR1H3BMG3 65 aa10.65□□□□□ -0.7
RAPGEF1-201ENST00000372189 PAX4O43316 350 aa10.65□□□□□ -0.7
RAPGEF1-201ENST00000372189 HRCT1Q6UXD1 115 aa10.65□□□□□ -0.7
RAPGEF1-201ENST00000372189 IL17RELQ6ZVW7 336 aa10.65□□□□□ -0.7
RAPGEF1-201ENST00000372189 INTS1Q8N201 2190 aaKnown RBP10.65□□□□□ -0.7
RAPGEF1-201ENST00000372189 KIF26AQ9ULI4 1882 aaPredicted RBP10.65□□□□□ -0.7
RAPGEF1-201ENST00000372189 WDR86Q86TI4 376 aa10.65□□□□□ -0.7
RAPGEF1-201ENST00000372189 LSM4Q9Y4Z0 139 aaKnown RBP10.65□□□□□ -0.7
RAPGEF1-201ENST00000372189 IGLC2P0DOY2 106 aa10.65□□□□□ -0.7
RAPGEF1-201ENST00000372189 IGLC3P0DOY3 106 aa10.65□□□□□ -0.7
RAPGEF1-201ENST00000372189 NDUFV3P56181 108 aaKnown RBP10.65□□□□□ -0.7
RAPGEF1-201ENST00000372189 MORN5Q5VZ52 161 aa10.65□□□□□ -0.7
RAPGEF1-201ENST00000372189 RCHY1Q96PM5 261 aa10.65□□□□□ -0.7
RAPGEF1-201ENST00000372189 MED12Q93074 2177 aa10.65□□□□□ -0.7
RAPGEF1-201ENST00000372189 A0A1B0GUS0 222 aa10.65□□□□□ -0.71
RAPGEF1-201ENST00000372189 ATP5EP56381 51 aaPredicted RBP10.65□□□□□ -0.71
RAPGEF1-201ENST00000372189 TMEM75Q8N9X5 138 aa10.64□□□□□ -0.71
RAPGEF1-201ENST00000372189 DSCR8Q96T75 97 aa10.64□□□□□ -0.71
RAPGEF1-201ENST00000372189 RTTNQ86VV8 2226 aa10.64□□□□□ -0.71
RAPGEF1-201ENST00000372189 OVOL3O00110 214 aa10.64□□□□□ -0.71
RAPGEF1-201ENST00000372189 YPEL3P61236 119 aaPredicted RBP10.64□□□□□ -0.71
RAPGEF1-201ENST00000372189 NANOS2P60321 138 aaKnown RBP10.64□□□□□ -0.71
RAPGEF1-201ENST00000372189 STPG4Q8N801 248 aa10.64□□□□□ -0.71
RAPGEF1-201ENST00000372189 BVES-AS1Q5T3Y7 98 aa10.64□□□□□ -0.71
RAPGEF1-201ENST00000372189 ZNF833PQ6ZTB9 187 aa10.64□□□□□ -0.71
RAPGEF1-201ENST00000372189 Q6ZWC4 215 aa10.64□□□□□ -0.71
RAPGEF1-201ENST00000372189 INS-IGF2F8WCM5 200 aa10.64□□□□□ -0.71
RAPGEF1-201ENST00000372189 INSP01308 110 aa10.64□□□□□ -0.71
RAPGEF1-201ENST00000372189 C3orf22Q8N5N4 141 aa10.64□□□□□ -0.71
RAPGEF1-201ENST00000372189 FAM110AQ9BQ89 295 aa10.64□□□□□ -0.71
RAPGEF1-201ENST00000372189 PDE6HQ13956 83 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 LINC00479Q96M42 142 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 SHANK2-AS3Q9BTD1 123 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 A6NED7 52 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 UBE2AP49459 152 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 C17orf58Q2M2W7 97 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 TIMM17BO60830 172 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 ARMS2P0C7Q2 107 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 PAX9P55771 341 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 C10orf105Q8TEF2 133 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 CHCHD5Q9BSY4 110 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 IGKV1-6A0A0C4DH72 117 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 Q6ZUT4 128 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 PRR15LQ9BU68 103 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 IGHV1-24A0A0C4DH33 117 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 hADV29S1A0JD25 119 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 UBE2BP63146 152 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 ZNF726P1Q15940 193 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 C14orf178Q8N769 122 aaPredicted RBP10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 C14orf132Q9NPU4 83 aa10.63□□□□□ -0.71
RAPGEF1-201ENST00000372189 SRRM4A7MD48 611 aaKnown RBP10.62□□□□□ -0.71
RAPGEF1-201ENST00000372189 FGF6P10767 208 aa10.62□□□□□ -0.71
RAPGEF1-201ENST00000372189 MYMXA0A1B0GTQ4 84 aa10.62□□□□□ -0.71
RAPGEF1-201ENST00000372189 A0A1W2PNU3 283 aaPredicted RBP10.62□□□□□ -0.71
RAPGEF1-201ENST00000372189 PRSS46E5RG02 174 aa10.62□□□□□ -0.71
RAPGEF1-201ENST00000372189 TIMM21Q9BVV7 248 aa10.62□□□□□ -0.71
RAPGEF1-201ENST00000372189 IL15RAQ13261 267 aa10.61□□□□□ -0.71
RAPGEF1-201ENST00000372189 MLANAQ16655 118 aa10.61□□□□□ -0.71
RAPGEF1-201ENST00000372189 ESPL1Q14674 2120 aa10.61□□□□□ -0.71
RAPGEF1-201ENST00000372189 TRGV1A0A0A0MS02 117 aa10.61□□□□□ -0.71
RAPGEF1-201ENST00000372189 SMIM27A0A1W2PRY6 76 aa10.61□□□□□ -0.71
RAPGEF1-201ENST00000372189 FAM104BQ5XKR9 115 aa10.61□□□□□ -0.71
RAPGEF1-201ENST00000372189 V9GYV3 84 aa10.61□□□□□ -0.71
RAPGEF1-201ENST00000372189 PLXND1Q9Y4D7 1925 aa10.61□□□□□ -0.71
RAPGEF1-201ENST00000372189 ADORA2A-AS1P86434 159 aa10.61□□□□□ -0.71
RAPGEF1-201ENST00000372189 LINC00311Q8N616 119 aa10.61□□□□□ -0.71
RAPGEF1-201ENST00000372189 C2orf16Q68DN1 1984 aa10.61□□□□□ -0.71
RAPGEF1-201ENST00000372189 SIGLEC8Q9NYZ4 499 aa10.61□□□□□ -0.71
RAPGEF1-201ENST00000372189 CACNA1GO43497 2377 aa10.6□□□□□ -0.71
RAPGEF1-201ENST00000372189 HEATR1Q9H583 2144 aaKnown RBP10.6□□□□□ -0.71
RAPGEF1-201ENST00000372189 TRBV19A0A075B6N1 114 aa10.6□□□□□ -0.71
RAPGEF1-201ENST00000372189 CYYR1Q96J86 154 aa10.6□□□□□ -0.71
RAPGEF1-201ENST00000372189 TMEM14BQ9NUH8 114 aa10.6□□□□□ -0.71
RAPGEF1-201ENST00000372189 RPL36AP83881 106 aaKnown RBP10.6□□□□□ -0.71
RAPGEF1-201ENST00000372189 RPL36ALQ969Q0 106 aaKnown RBP10.6□□□□□ -0.71
RAPGEF1-201ENST00000372189 PRR4Q16378 134 aa10.6□□□□□ -0.71
RAPGEF1-201ENST00000372189 TIMM17AQ99595 171 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms