RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 RNF182Q8N6D2 247 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 Q8N976 141 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 MIEN1Q9BRT3 115 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 TMEM70Q9BUB7 260 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 HSPB8Q9UJY1 196 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 U3KQK5 164 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 K7EMT4 169 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 OVOL1O14753 267 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 CRXO43186 299 aaPredicted RBP10.72□□□□□ -0.69
USF1-202ENST00000368020 BLCAPP62952 87 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 ORMDL3Q8N138 153 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 LINC00477Q96M19 166 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 DAZ1Q9NQZ3 744 aaKnown RBP10.72□□□□□ -0.69
USF1-202ENST00000368020 AP5S1Q9NUS5 200 aa10.72□□□□□ -0.69
USF1-202ENST00000368020 HIVEP2P31629 2446 aa10.71□□□□□ -0.69
USF1-202ENST00000368020 TMSB15BA0A087X1C1 80 aa10.71□□□□□ -0.69
USF1-202ENST00000368020 IGHV1-24A0A0C4DH33 117 aa10.71□□□□□ -0.69
USF1-202ENST00000368020 ZNF207O43670 478 aaKnown RBP10.71□□□□□ -0.69
USF1-202ENST00000368020 LEPROTL1O95214 131 aa10.71□□□□□ -0.69
USF1-202ENST00000368020 FSHBP01225 129 aa10.71□□□□□ -0.69
USF1-202ENST00000368020 PPBPP02775 128 aa10.71□□□□□ -0.69
USF1-202ENST00000368020 ZNF80P51504 273 aaPredicted RBP10.71□□□□□ -0.69
USF1-202ENST00000368020 SSTP61278 116 aa10.71□□□□□ -0.69
USF1-202ENST00000368020 ERCC8Q13216 396 aa10.71□□□□□ -0.69
USF1-202ENST00000368020 FAM106AQ4KMX7 169 aa10.71□□□□□ -0.69
USF1-202ENST00000368020 URB1-AS1Q96HZ7 61 aa10.71□□□□□ -0.69
USF1-202ENST00000368020 TMEM191AQ9H0A3 160 aa10.71□□□□□ -0.69
USF1-202ENST00000368020 AGPAT4-IT1Q9H0P7 198 aa10.71□□□□□ -0.69
USF1-202ENST00000368020 LAMTOR2Q9Y2Q5 125 aa10.71□□□□□ -0.69
USF1-202ENST00000368020 PAM16Q9Y3D7 125 aa10.71□□□□□ -0.69
USF1-202ENST00000368020 IGHV3OR16-13A0A075B7E8 117 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 IGHV3-74A0A0B4J1X5 117 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 TRBV7-9A0A0J9YWB2 115 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 C2orf70A6NJV1 201 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 PRAC2D3DTV9 90 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 TWIST1Q15672 202 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 DEFB112Q30KQ8 113 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 IL17RELQ6ZVW7 336 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 FA2HQ7L5A8 372 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 ZNF738Q8NE65 137 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 OR10J6PQ8NGY7 276 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 PEF1Q9UBV8 284 aaKnown RBP10.7□□□□□ -0.7
USF1-202ENST00000368020 HIVEP1P15822 2718 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 IGHV3-49A0A0A0MS15 119 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 IGHV7-4-1A0A0J9YVY3 117 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 PRSS3P2Q8NHM4 247 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 C2orf88Q9BSF0 95 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 TMEM160Q9NX00 188 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 RNF114Q9Y508 228 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 CELSR1Q9NYQ6 3014 aa10.7□□□□□ -0.7
USF1-202ENST00000368020 TRBV12-3P01733 135 aa10.69□□□□□ -0.7
USF1-202ENST00000368020 PSMB8P28062 276 aa10.69□□□□□ -0.7
USF1-202ENST00000368020 SPATA45Q537H7 98 aa10.69□□□□□ -0.7
USF1-202ENST00000368020 UNQ9165/PRO28630Q6UXU0 137 aa10.69□□□□□ -0.7
USF1-202ENST00000368020 GPHB5Q86YW7 130 aa10.69□□□□□ -0.7
USF1-202ENST00000368020 OR10AG1Q8NH19 301 aa10.69□□□□□ -0.7
USF1-202ENST00000368020 PRELID3AQ96N28 172 aa10.69□□□□□ -0.7
USF1-202ENST00000368020 MAP1LC3CQ9BXW4 147 aa10.69□□□□□ -0.7
USF1-202ENST00000368020 KLK15Q9H2R5 256 aa10.69□□□□□ -0.7
USF1-202ENST00000368020 VPREB3Q9UKI3 123 aa10.69□□□□□ -0.7
USF1-202ENST00000368020 UFC1Q9Y3C8 167 aa10.69□□□□□ -0.7
USF1-202ENST00000368020 MTORP42345 2549 aa10.68□□□□□ -0.7
USF1-202ENST00000368020 M0R143 59 aa10.68□□□□□ -0.7
USF1-202ENST00000368020 IGHV4-59P01825 116 aa10.68□□□□□ -0.7
USF1-202ENST00000368020 FOXE3Q13461 319 aa10.68□□□□□ -0.7
USF1-202ENST00000368020 EBLN2Q6P2I7 272 aa10.68□□□□□ -0.7
USF1-202ENST00000368020 SMIM15Q7Z3B0 74 aa10.68□□□□□ -0.7
USF1-202ENST00000368020 AKAP9Q99996 3911 aa10.68□□□□□ -0.7
USF1-202ENST00000368020 F8P00451 2351 aa10.68□□□□□ -0.7
USF1-202ENST00000368020 ZNF469Q96JG9 3925 aaPredicted RBP10.67□□□□□ -0.7
USF1-202ENST00000368020 TMEM213A2RRL7 107 aa10.67□□□□□ -0.7
USF1-202ENST00000368020 D6R8Y8 96 aa10.67□□□□□ -0.7
USF1-202ENST00000368020 SOCS3O14543 225 aa10.67□□□□□ -0.7
USF1-202ENST00000368020 IGHV3-11P01762 117 aa10.67□□□□□ -0.7
USF1-202ENST00000368020 CACNG7P62955 275 aa10.67□□□□□ -0.7
USF1-202ENST00000368020 PET117Q6UWS5 81 aa10.67□□□□□ -0.7
USF1-202ENST00000368020 UQCR10Q9UDW1 63 aa10.67□□□□□ -0.7
USF1-202ENST00000368020 TRAV9-2A0A087WT02 112 aa10.67□□□□□ -0.7
USF1-202ENST00000368020 SYS1-DBNDD2H3BUS1 97 aa10.67□□□□□ -0.7
USF1-202ENST00000368020 CKS2P33552 79 aa10.67□□□□□ -0.7
USF1-202ENST00000368020 ID1P41134 155 aa10.67□□□□□ -0.7
USF1-202ENST00000368020 TDRG1Q3Y452 100 aa10.67□□□□□ -0.7
USF1-202ENST00000368020 ZNF705AQ6ZN79 300 aaPredicted RBP10.67□□□□□ -0.7
USF1-202ENST00000368020 AMN1Q8IY45 258 aa10.67□□□□□ -0.7
USF1-202ENST00000368020 RHPN1-AS1Q9BWJ2 59 aa10.67□□□□□ -0.7
USF1-202ENST00000368020 PRB4P10163 310 aaPredicted RBP10.66□□□□□ -0.7
USF1-202ENST00000368020 MRPL51Q4U2R6 128 aaKnown RBP10.66□□□□□ -0.7
USF1-202ENST00000368020 Q6YL49 198 aa10.66□□□□□ -0.7
USF1-202ENST00000368020 YAE1D1Q9NRH1 226 aa10.66□□□□□ -0.7
USF1-202ENST00000368020 SMPXQ9UHP9 88 aa10.66□□□□□ -0.7
USF1-202ENST00000368020 MXRA5Q9NR99 2828 aa10.65□□□□□ -0.7
USF1-202ENST00000368020 TRAV21A0A0B4J279 112 aa10.65□□□□□ -0.7
USF1-202ENST00000368020 ELANEP08246 267 aa10.65□□□□□ -0.7
USF1-202ENST00000368020 Q6ZS46 218 aa10.65□□□□□ -0.7
USF1-202ENST00000368020 IGHV4-4A0A075B6R2 117 aa10.64□□□□□ -0.71
USF1-202ENST00000368020 M0QZ24 198 aa10.64□□□□□ -0.71
USF1-202ENST00000368020 CSN3P07498 182 aa10.64□□□□□ -0.71
USF1-202ENST00000368020 RPL11P62913 178 aaKnown RBP10.64□□□□□ -0.71
USF1-202ENST00000368020 SPATA12Q7Z6I5 190 aa10.64□□□□□ -0.71
USF1-202ENST00000368020 IGKV3D-20A0A0C4DH25 116 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms