RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 C15orf32Q32M92 178 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 NEGR1Q7Z3B1 354 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 HLA-DMBP28068 263 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 HERVK_113P63121 156 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 CSRP2Q16527 193 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 TAL2Q16559 108 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 ZNF497Q6ZNH5 498 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 DSCR8Q96T75 97 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 COX6A1P12074 109 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 WBP1Q96G27 269 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 IGHV3-16A0A0C4DH30 117 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 SOCS3O14543 225 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 OVOL1O14753 267 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 MRPL51Q4U2R6 128 aaKnown RBP8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 ADAMTS20P59510 1910 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 A0A1W2PPI3 338 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 DUTP33316 252 aaKnown RBP8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 FAM90A9PA6NNJ1 464 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 CR1LQ2VPA4 569 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 C14orf178Q8N769 122 aaPredicted RBP8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 NBL1P41271 181 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 IL17RELQ6ZVW7 336 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 SPATA12Q7Z6I5 190 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 SMRP1Q8NCR6 262 aa8.99□□□□□ -0.97
CDC42BPA-205ENST00000366769 H0YJW9 148 aa8.98□□□□□ -0.97
CDC42BPA-205ENST00000366769 LTAP01374 205 aa8.98□□□□□ -0.97
CDC42BPA-205ENST00000366769 SPACA3Q8IXA5 215 aa8.98□□□□□ -0.97
CDC42BPA-205ENST00000366769 MSRB2Q9Y3D2 182 aa8.98□□□□□ -0.97
CDC42BPA-205ENST00000366769 C15orf62A8K5M9 175 aa8.98□□□□□ -0.97
CDC42BPA-205ENST00000366769 UTF1Q5T230 341 aa8.98□□□□□ -0.97
CDC42BPA-205ENST00000366769 WDR83OSQ9Y284 106 aa8.98□□□□□ -0.97
CDC42BPA-205ENST00000366769 PVRIGQ6DKI7 326 aa8.98□□□□□ -0.97
CDC42BPA-205ENST00000366769 PIP4P2Q8N4L2 257 aa8.98□□□□□ -0.97
CDC42BPA-205ENST00000366769 CSDC2Q9Y534 153 aaKnown RBP8.98□□□□□ -0.97
CDC42BPA-205ENST00000366769 PMS2P5A8MQ11 134 aa8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 M0R1W7 72 aa8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 VCYO14598 125 aa8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 FOXG1P55316 489 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 LINC01559Q495D7 138 aa8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 MRPL55Q7Z7F7 128 aaKnown RBP8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 SLC25A45Q8N413 288 aa8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 Q6ZRM9 215 aa8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 MRPL35Q9NZE8 188 aaKnown RBP8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 UPK2O00526 184 aa8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 LINC00114Q6XXX2 140 aa8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 PRO1854Q9UHT4 67 aa8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 PILRAQ9UKJ1 303 aa8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 CLPSL2Q6UWE3 100 aa8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 ZNF837Q96EG3 531 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 LY6DQ14210 128 aa8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 A0A0G2JRQ6 117 aa8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 THBDP07204 575 aa8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 LRRK2Q5S007 2527 aa8.97□□□□□ -0.97
CDC42BPA-205ENST00000366769 KNCNA6PVL3 124 aa8.96□□□□□ -0.97
CDC42BPA-205ENST00000366769 TIMM23O14925 209 aa8.96□□□□□ -0.97
CDC42BPA-205ENST00000366769 IGFL4Q6B9Z1 124 aa8.96□□□□□ -0.97
CDC42BPA-205ENST00000366769 IQCF6A8MYZ5 107 aa8.96□□□□□ -0.97
CDC42BPA-205ENST00000366769 TMEM133Q9H2Q1 129 aa8.96□□□□□ -0.97
CDC42BPA-205ENST00000366769 C17orf100A8MU93 164 aa8.96□□□□□ -0.98
CDC42BPA-205ENST00000366769 SP9P0CG40 484 aa8.96□□□□□ -0.98
CDC42BPA-205ENST00000366769 GATA4P43694 442 aa8.96□□□□□ -0.98
CDC42BPA-205ENST00000366769 ZFHX2Q9C0A1 2572 aaPredicted RBP8.96□□□□□ -0.98
CDC42BPA-205ENST00000366769 NXPH4O95158 308 aa8.96□□□□□ -0.98
CDC42BPA-205ENST00000366769 RFPL3SP0C7P2 107 aa8.96□□□□□ -0.98
CDC42BPA-205ENST00000366769 CMC4P56277 68 aaPredicted RBP8.96□□□□□ -0.98
CDC42BPA-205ENST00000366769 LINC00312Q9Y6C7 94 aa8.96□□□□□ -0.98
CDC42BPA-205ENST00000366769 LRP4O75096 1905 aa8.96□□□□□ -0.98
CDC42BPA-205ENST00000366769 RNASE6Q93091 150 aaKnown RBP8.96□□□□□ -0.98
CDC42BPA-205ENST00000366769 PCSK5Q92824 1860 aa8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 DAD1P61803 113 aa8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 GFRA4Q9GZZ7 299 aa8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 UBL5Q9BZL1 73 aa8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 TEX49A0A1B0GTD5 131 aa8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 RNF152Q8N8N0 203 aa8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 WFDC11Q8NEX6 87 aa8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 SMIM2Q9BVW6 85 aa8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 FRMD6-AS1P0C7T7 363 aa8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 NDUFA7O95182 113 aa8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 C5orf64Q2M2E5 130 aa8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 WIPF2Q8TF74 440 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 CRYGBP07316 175 aa8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 PRCDQ00LT1 54 aa8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 IGKV1-12A0A0C4DH73 117 aa8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 IGKV1D-12P01611 117 aa8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 CRLF1O75462 422 aa8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 SP7Q8TDD2 431 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-205ENST00000366769 UBE2BP63146 152 aa8.94□□□□□ -0.98
CDC42BPA-205ENST00000366769 LINC01545Q5VT33 79 aa8.94□□□□□ -0.98
CDC42BPA-205ENST00000366769 TTTY13Q9BZ97 58 aa8.94□□□□□ -0.98
CDC42BPA-205ENST00000366769 CPAMD8Q8IZJ3 1885 aa8.94□□□□□ -0.98
CDC42BPA-205ENST00000366769 E9PQ18 207 aa8.94□□□□□ -0.98
CDC42BPA-205ENST00000366769 TGFBR3LH3BV60 316 aa8.94□□□□□ -0.98
CDC42BPA-205ENST00000366769 IGHV4-4A0A075B6R2 117 aa8.94□□□□□ -0.98
CDC42BPA-205ENST00000366769 PSG7Q13046 419 aa8.94□□□□□ -0.98
CDC42BPA-205ENST00000366769 ATP6V0E2Q8NHE4 81 aa8.94□□□□□ -0.98
CDC42BPA-205ENST00000366769 FLG2Q5D862 2391 aaPredicted RBP8.94□□□□□ -0.98
CDC42BPA-205ENST00000366769 ATOX1O00244 68 aa8.94□□□□□ -0.98
CDC42BPA-205ENST00000366769 SPTSSBQ8NFR3 76 aa8.94□□□□□ -0.98
CDC42BPA-205ENST00000366769 LINC00477Q96M19 166 aa8.94□□□□□ -0.98
CDC42BPA-205ENST00000366769 MPLKIPQ8TAP9 179 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms