RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 IFITM5A6NNB3 132 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 DHFRP00374 187 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 HRASP01112 189 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 IL4P05112 153 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 TRAPPC2P0DI81 140 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 TRAPPC2BP0DI82 140 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 P0DMU3 169 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 FAM231AP0DMU4 169 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 FAM231CP0DMU5 169 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 SSX1Q16384 188 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 TAL2Q16559 108 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 HACD4Q5VWC8 232 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 THOC7Q6I9Y2 204 aaKnown RBP3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 TOMM20LQ6UXN7 152 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 LINC00477Q96M19 166 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 MND1Q9BWT6 205 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 NXF2Q9GZY0 626 aaKnown RBP3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 DCSTAMPQ9H295 470 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 HRASLSQ9HDD0 168 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 HMCN2Q8NDA2 5059 aa3.2□□□□□ -1.9
RNU4-39P-201ENST00000362455 TRAV14DV4A0A0A6YYC5 116 aa3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 TRAV8-6A0A0B4J262 113 aa3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 ANKRD20A5PA0PJZ0 165 aa3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 TMEM235A6NFC5 223 aa3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 MRPS14O60783 128 aaKnown RBP3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 CTXN2P0C2S0 81 aa3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 MIFP14174 115 aa3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 CD36P16671 472 aa3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 CMC4P56277 68 aaPredicted RBP3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 Q56UQ5 140 aa3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 ZNF818PQ6ZRF7 136 aa3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 C8orf59Q8N0T1 100 aaPredicted RBP3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 OR1L8Q8NGR8 309 aa3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 DCANP1Q8TF63 244 aa3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 C20orf144Q9BQM9 153 aa3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 COMMD5Q9GZQ3 224 aa3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 C6orf62Q9GZU0 229 aaPredicted RBP3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 DUSP21Q9H596 190 aa3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 MRPL36Q9P0J6 103 aaKnown RBP3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 ANXA10Q9UJ72 324 aa3.19□□□□□ -1.9
RNU4-39P-201ENST00000362455 TRAV1-2A0A0B4J238 106 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 C16orf90A8MZG2 172 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 K7EN84 100 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 ARL6IP5O75915 188 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 MT-CO2P00403 227 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 PPYP01298 95 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 IGKV1-39P01597 117 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 IGKV1D-39P04432 117 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 OR5AL1P0C617 328 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 NQO2P16083 231 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 GADD45AP24522 165 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 DEFB1P60022 68 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 MRPS15P82914 257 aaKnown RBP3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 MLLT11Q13015 90 aaPredicted RBP3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 MSMO1Q15800 293 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 C1orf134Q5TEV5 83 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 MORN3Q6PF18 240 aaPredicted RBP3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 PACRGLQ8N7B6 248 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 OR1P1Q8NH06 330 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 OR51H1Q8NH63 302 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 ZFAND1Q8TCF1 268 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 LSM10Q969L4 123 aaKnown RBP3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 HINT2Q9BX68 163 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 ATG5Q9H1Y0 275 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 TMEM14BQ9NUH8 114 aa3.18□□□□□ -1.9
RNU4-39P-201ENST00000362455 IGHV6-1A0A0B4J1U7 121 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 TRAV2A0A0B4J234 112 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 FAM240AA0A1B0GVK7 77 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 ZNF705FA8MVS1 300 aaPredicted RBP3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 PGLYRP1O75594 196 aaPredicted RBP3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 KRASP01116 189 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 IFNA10P01566 189 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 ZNF705DP0CH99 300 aaPredicted RBP3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 ZNF705BP0CI00 300 aaPredicted RBP3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 CRYBB3P26998 211 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 G6PCP35575 357 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 LPAR6P43657 344 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 FXYD4P59646 89 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 TRAM1Q15629 374 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 ACTL10Q5JWF8 245 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 OGFRL1Q5TC84 451 aaPredicted RBP3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 ZNF705AQ6ZN79 300 aaPredicted RBP3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 SPANXA2-OT1Q8N9U9 137 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 OR5H6Q8NGV6 325 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 MGLLQ99685 303 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 VCX3AQ9NNX9 186 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 ACOT13Q9NPJ3 140 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 COMMD9Q9P000 198 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 RABAC1Q9UI14 185 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 PUS1Q9Y606 427 aaKnown RBP eCLIP3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 DNAH8Q96JB1 4490 aa3.17□□□□□ -1.9
RNU4-39P-201ENST00000362455 FLG2Q5D862 2391 aaPredicted RBP3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 TRDV1A0A1B0GX56 115 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 H3BMM0 161 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 GATCO43716 136 aaKnown RBP3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 IGKV1-17P01599 117 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 PRM2P04554 102 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 PSMA1P25786 263 aaKnown RBP3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 PRSS3P35030 304 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 EMP1P54849 157 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 1644.8 ms