RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 LINC00322Q6ZN03 302 aaPredicted RBP16.17■□□□□ 0.18
HOXA4-201ENST00000360046 COX8CQ7Z4L0 72 aa16.17■□□□□ 0.18
HOXA4-201ENST00000360046 FAM19A4Q96LR4 140 aa16.17■□□□□ 0.18
HOXA4-201ENST00000360046 G3V4G9 280 aa16.16■□□□□ 0.18
HOXA4-201ENST00000360046 GPX1P07203 203 aa16.16■□□□□ 0.18
HOXA4-201ENST00000360046 LEPP41159 167 aa16.16■□□□□ 0.18
HOXA4-201ENST00000360046 ZFAND2AQ8N6M9 145 aa16.16■□□□□ 0.18
HOXA4-201ENST00000360046 C15orf54Q8N8G6 183 aa16.16■□□□□ 0.18
HOXA4-201ENST00000360046 DAZAP1Q96EP5 407 aaKnown RBP16.16■□□□□ 0.18
HOXA4-201ENST00000360046 ODF3Q96PU9 254 aa16.16■□□□□ 0.18
HOXA4-201ENST00000360046 TUBA4BQ9H853 241 aa16.16■□□□□ 0.18
HOXA4-201ENST00000360046 TRBV7-9A0A0J9YWB2 115 aa16.16■□□□□ 0.18
HOXA4-201ENST00000360046 CRISP2P16562 243 aa16.16■□□□□ 0.18
HOXA4-201ENST00000360046 ZNF80P51504 273 aaPredicted RBP16.16■□□□□ 0.18
HOXA4-201ENST00000360046 FAM162BQ5T6X4 162 aa16.16■□□□□ 0.18
HOXA4-201ENST00000360046 TMEM88Q6PEY1 159 aa16.16■□□□□ 0.18
HOXA4-201ENST00000360046 OR10G8Q8NGN5 311 aa16.16■□□□□ 0.18
HOXA4-201ENST00000360046 M0R2Z0 102 aa16.15■□□□□ 0.18
HOXA4-201ENST00000360046 CRIP1P50238 77 aa16.15■□□□□ 0.18
HOXA4-201ENST00000360046 SPINK13Q1W4C9 94 aa16.15■□□□□ 0.18
HOXA4-201ENST00000360046 PRR9Q5T870 116 aa16.15■□□□□ 0.18
HOXA4-201ENST00000360046 AMTNQ6UX39 209 aa16.15■□□□□ 0.18
HOXA4-201ENST00000360046 RBMY1BA6NDE4 496 aaKnown RBP16.14■□□□□ 0.17
HOXA4-201ENST00000360046 RBMY1EA6NEQ0 496 aaKnown RBP16.14■□□□□ 0.17
HOXA4-201ENST00000360046 RBMY1DP0C7P1 496 aaKnown RBP16.14■□□□□ 0.17
HOXA4-201ENST00000360046 TSPOP30536 169 aa16.14■□□□□ 0.17
HOXA4-201ENST00000360046 RNASE4P34096 147 aaKnown RBP16.14■□□□□ 0.17
HOXA4-201ENST00000360046 CBLN2Q8IUK8 224 aa16.14■□□□□ 0.17
HOXA4-201ENST00000360046 DEFB125Q8N687 156 aa16.14■□□□□ 0.17
HOXA4-201ENST00000360046 NUDT10Q8NFP7 164 aa16.14■□□□□ 0.17
HOXA4-201ENST00000360046 NUDT11Q96G61 164 aa16.14■□□□□ 0.17
HOXA4-201ENST00000360046 OSTCQ9NRP0 149 aa16.14■□□□□ 0.17
HOXA4-201ENST00000360046 A8MTW9 85 aa16.14■□□□□ 0.17
HOXA4-201ENST00000360046 H7BYZ3 331 aa16.14■□□□□ 0.17
HOXA4-201ENST00000360046 SH2D1AO60880 128 aa16.14■□□□□ 0.17
HOXA4-201ENST00000360046 P01737 135 aa16.14■□□□□ 0.17
HOXA4-201ENST00000360046 CDKN1BP46527 198 aa16.14■□□□□ 0.17
HOXA4-201ENST00000360046 FXYD7P58549 80 aa16.14■□□□□ 0.17
HOXA4-201ENST00000360046 KIR3DS1Q14943 382 aa16.14■□□□□ 0.17
HOXA4-201ENST00000360046 FAM231DQ6ZW35 169 aa16.14■□□□□ 0.17
HOXA4-201ENST00000360046 ANAPC16Q96DE5 110 aa16.14■□□□□ 0.17
HOXA4-201ENST00000360046 A0A087WWC5 75 aa16.13■□□□□ 0.17
HOXA4-201ENST00000360046 C19orf71A6NCJ1 209 aa16.13■□□□□ 0.17
HOXA4-201ENST00000360046 ZNF705GA8MUZ8 300 aaPredicted RBP16.13■□□□□ 0.17
HOXA4-201ENST00000360046 PPP1R2P9O14990 202 aa16.13■□□□□ 0.17
HOXA4-201ENST00000360046 TRPT1Q86TN4 253 aaKnown RBP16.13■□□□□ 0.17
HOXA4-201ENST00000360046 TRAV12-2A0A075B6T6 113 aa16.12■□□□□ 0.17
HOXA4-201ENST00000360046 KLLNB2CW77 178 aa16.12■□□□□ 0.17
HOXA4-201ENST00000360046 PFN1P07737 140 aaKnown RBP16.12■□□□□ 0.17
HOXA4-201ENST00000360046 CTDSP1Q9GZU7 261 aa16.12■□□□□ 0.17
HOXA4-201ENST00000360046 FABP5P3A8MUU1 101 aa16.11■□□□□ 0.17
HOXA4-201ENST00000360046 GATCO43716 136 aaKnown RBP16.11■□□□□ 0.17
HOXA4-201ENST00000360046 KRTAP10-11P60412 298 aa16.11■□□□□ 0.17
HOXA4-201ENST00000360046 SAMD5Q5TGI4 173 aa16.11■□□□□ 0.17
HOXA4-201ENST00000360046 ZMAT5Q9UDW3 170 aaKnown RBP16.11■□□□□ 0.17
HOXA4-201ENST00000360046 CLUHP3Q96NS8 147 aa16.11■□□□□ 0.17
HOXA4-201ENST00000360046 RPL35AP18077 110 aaKnown RBP16.1■□□□□ 0.17
HOXA4-201ENST00000360046 EGFEM1PQ0D2K5 195 aa16.1■□□□□ 0.17
HOXA4-201ENST00000360046 GFI1BQ5VTD9 330 aa16.1■□□□□ 0.17
HOXA4-201ENST00000360046 RPP21Q9H633 154 aaKnown RBP16.1■□□□□ 0.17
HOXA4-201ENST00000360046 V9GYV3 84 aa16.1■□□□□ 0.17
HOXA4-201ENST00000360046 NOTCH1P46531 2555 aa16.09■□□□□ 0.17
HOXA4-201ENST00000360046 C7orf71A4D174 169 aa16.09■□□□□ 0.17
HOXA4-201ENST00000360046 Q6ZQT7 251 aa16.09■□□□□ 0.17
HOXA4-201ENST00000360046 SRD5A3Q9H8P0 318 aa16.09■□□□□ 0.17
HOXA4-201ENST00000360046 MGAM2Q2M2H8 2515 aa16.09■□□□□ 0.17
HOXA4-201ENST00000360046 TRAV12-3A0A0B4J271 114 aa16.08■□□□□ 0.17
HOXA4-201ENST00000360046 TRAV21A0A0B4J279 112 aa16.08■□□□□ 0.17
HOXA4-201ENST00000360046 CA1P00915 261 aaPredicted RBP16.08■□□□□ 0.17
HOXA4-201ENST00000360046 NUTF2P61970 127 aaKnown RBP16.08■□□□□ 0.17
HOXA4-201ENST00000360046 Q8N1Y9 231 aa16.08■□□□□ 0.17
HOXA4-201ENST00000360046 OR2D3Q8NGH3 330 aa16.08■□□□□ 0.17
HOXA4-201ENST00000360046 TMEM242Q9NWH2 141 aa16.08■□□□□ 0.17
HOXA4-201ENST00000360046 NBEAL1Q6ZS30 2694 aa16.08■□□□□ 0.16
HOXA4-201ENST00000360046 COLCA2A8K830 154 aa16.08■□□□□ 0.16
HOXA4-201ENST00000360046 ORM1P02763 201 aa16.08■□□□□ 0.16
HOXA4-201ENST00000360046 RPL19P84098 196 aaKnown RBP16.08■□□□□ 0.16
HOXA4-201ENST00000360046 Q6AWC8 147 aa16.08■□□□□ 0.16
HOXA4-201ENST00000360046 NAGKQ9UJ70 344 aa16.08■□□□□ 0.16
HOXA4-201ENST00000360046 TMSB15BA0A087X1C1 80 aa16.07■□□□□ 0.16
HOXA4-201ENST00000360046 TMEM189A5PLL7 270 aa16.06■□□□□ 0.16
HOXA4-201ENST00000360046 C11orf21Q9P2W6 132 aa16.05■□□□□ 0.16
HOXA4-201ENST00000360046 XCL2Q9UBD3 114 aa16.05■□□□□ 0.16
HOXA4-201ENST00000360046 URGCP-MRPS24S4R325 110 aa16.05■□□□□ 0.16
HOXA4-201ENST00000360046 CRXO43186 299 aaPredicted RBP16.05■□□□□ 0.16
HOXA4-201ENST00000360046 INSP01308 110 aa16.04■□□□□ 0.16
HOXA4-201ENST00000360046 AMBPP02760 352 aa16.04■□□□□ 0.16
HOXA4-201ENST00000360046 CT83Q5H943 113 aa16.04■□□□□ 0.16
HOXA4-201ENST00000360046 MUC21Q5SSG8 566 aa16.04■□□□□ 0.16
HOXA4-201ENST00000360046 IL36BQ9NZH7 164 aa16.04■□□□□ 0.16
HOXA4-201ENST00000360046 CXorf65A6NEN9 183 aa16.03■□□□□ 0.16
HOXA4-201ENST00000360046 A8MWL6 223 aa16.03■□□□□ 0.16
HOXA4-201ENST00000360046 GZMBP10144 247 aa16.03■□□□□ 0.16
HOXA4-201ENST00000360046 TCL1AP56279 114 aa16.03■□□□□ 0.16
HOXA4-201ENST00000360046 RAB5BP61020 215 aa16.03■□□□□ 0.16
HOXA4-201ENST00000360046 LINC01559Q495D7 138 aa16.03■□□□□ 0.16
HOXA4-201ENST00000360046 ZNF324O75467 553 aaPredicted RBP16.02■□□□□ 0.16
HOXA4-201ENST00000360046 S100PP25815 95 aa16.02■□□□□ 0.16
HOXA4-201ENST00000360046 MORN3Q6PF18 240 aaPredicted RBP16.02■□□□□ 0.16
HOXA4-201ENST00000360046 TSKUQ8WUA8 353 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms