RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 RPL19P84098 196 aaKnown RBP17.26■□□□□ 0.35
SDF4-202ENST00000360001 ZFAND2AQ8N6M9 145 aa17.26■□□□□ 0.35
SDF4-202ENST00000360001 SAV1Q9H4B6 383 aaPredicted RBP17.26■□□□□ 0.35
SDF4-202ENST00000360001 TRAV9-1A0A075B6T8 112 aa17.25■□□□□ 0.35
SDF4-202ENST00000360001 A8MWL6 223 aa17.25■□□□□ 0.35
SDF4-202ENST00000360001 PRR9Q5T870 116 aa17.25■□□□□ 0.35
SDF4-202ENST00000360001 TRBV7-9A0A0J9YWB2 115 aa17.24■□□□□ 0.35
SDF4-202ENST00000360001 FABP5P3A8MUU1 101 aa17.24■□□□□ 0.35
SDF4-202ENST00000360001 EBLN2Q6P2I7 272 aa17.24■□□□□ 0.35
SDF4-202ENST00000360001 FOXI2Q6ZQN5 318 aa17.24■□□□□ 0.35
SDF4-202ENST00000360001 NEU1Q99519 415 aa17.24■□□□□ 0.35
SDF4-202ENST00000360001 MAP6D1Q9H9H5 199 aa17.24■□□□□ 0.35
SDF4-202ENST00000360001 TYMSP04818 313 aa17.23■□□□□ 0.35
SDF4-202ENST00000360001 CRISP2P16562 243 aa17.23■□□□□ 0.35
SDF4-202ENST00000360001 RPS10P46783 165 aaKnown RBP17.23■□□□□ 0.35
SDF4-202ENST00000360001 GTSF1Q8WW33 167 aa17.23■□□□□ 0.35
SDF4-202ENST00000360001 BTF3L4Q96K17 158 aa17.23■□□□□ 0.35
SDF4-202ENST00000360001 AGRNO00468 2067 aa17.23■□□□□ 0.35
SDF4-202ENST00000360001 GZMBP10144 247 aa17.22■□□□□ 0.35
SDF4-202ENST00000360001 APRG1Q8IVJ8 170 aa17.22■□□□□ 0.35
SDF4-202ENST00000360001 OR2K2Q8NGT1 345 aa17.22■□□□□ 0.35
SDF4-202ENST00000360001 SPATA3Q8NHX4 192 aa17.22■□□□□ 0.35
SDF4-202ENST00000360001 GFRA4Q9GZZ7 299 aa17.22■□□□□ 0.35
SDF4-202ENST00000360001 NAT8BQ9UHF3 227 aa17.22■□□□□ 0.35
SDF4-202ENST00000360001 HIGD1CA8MV81 97 aa17.21■□□□□ 0.35
SDF4-202ENST00000360001 NUP35Q8NFH5 326 aa17.21■□□□□ 0.35
SDF4-202ENST00000360001 ODF3Q96PU9 254 aa17.21■□□□□ 0.35
SDF4-202ENST00000360001 TMEM189A5PLL7 270 aa17.2■□□□□ 0.34
SDF4-202ENST00000360001 KNCNA6PVL3 124 aa17.2■□□□□ 0.34
SDF4-202ENST00000360001 J3KRW8 73 aa17.2■□□□□ 0.34
SDF4-202ENST00000360001 DUSP14O95147 198 aaKnown RBP17.2■□□□□ 0.34
SDF4-202ENST00000360001 ZNF124Q15973 351 aa17.2■□□□□ 0.34
SDF4-202ENST00000360001 ODF3L2Q3SX64 289 aa17.2■□□□□ 0.34
SDF4-202ENST00000360001 Q6ZQT7 251 aa17.2■□□□□ 0.34
SDF4-202ENST00000360001 SRD5A3Q9H8P0 318 aa17.2■□□□□ 0.34
SDF4-202ENST00000360001 FAM231BA6NCW3 169 aa17.2■□□□□ 0.34
SDF4-202ENST00000360001 KIR3DS1Q14943 382 aa17.2■□□□□ 0.34
SDF4-202ENST00000360001 ZNF575Q86XF7 245 aa17.2■□□□□ 0.34
SDF4-202ENST00000360001 C11orf21Q9P2W6 132 aa17.2■□□□□ 0.34
SDF4-202ENST00000360001 SPINK4O60575 86 aa17.19■□□□□ 0.34
SDF4-202ENST00000360001 IGKV3-20P01619 116 aa17.19■□□□□ 0.34
SDF4-202ENST00000360001 GPX1P07203 203 aa17.19■□□□□ 0.34
SDF4-202ENST00000360001 TMSB15BA0A087X1C1 80 aa17.19■□□□□ 0.34
SDF4-202ENST00000360001 KLLNB2CW77 178 aa17.19■□□□□ 0.34
SDF4-202ENST00000360001 HLA-DRB4P13762 266 aa17.19■□□□□ 0.34
SDF4-202ENST00000360001 LINC01559Q495D7 138 aa17.19■□□□□ 0.34
SDF4-202ENST00000360001 ACTL10Q5JWF8 245 aa17.19■□□□□ 0.34
SDF4-202ENST00000360001 ZNF747Q9BV97 191 aa17.19■□□□□ 0.34
SDF4-202ENST00000360001 HLA-DRB4X5D2U9 266 aa17.19■□□□□ 0.34
SDF4-202ENST00000360001 ORM1P02763 201 aa17.18■□□□□ 0.34
SDF4-202ENST00000360001 FRMD6-AS1P0C7T7 363 aa17.18■□□□□ 0.34
SDF4-202ENST00000360001 FOXA3P55318 350 aaPredicted RBP17.18■□□□□ 0.34
SDF4-202ENST00000360001 A8MTW9 85 aa17.17■□□□□ 0.34
SDF4-202ENST00000360001 H3BMM0 161 aa17.17■□□□□ 0.34
SDF4-202ENST00000360001 AMTNQ6UX39 209 aa17.17■□□□□ 0.34
SDF4-202ENST00000360001 RNASE4P34096 147 aaKnown RBP17.17■□□□□ 0.34
SDF4-202ENST00000360001 LEPP41159 167 aa17.17■□□□□ 0.34
SDF4-202ENST00000360001 IGKV3D-20A0A0C4DH25 116 aa17.16■□□□□ 0.34
SDF4-202ENST00000360001 Q6AWC8 147 aa17.16■□□□□ 0.34
SDF4-202ENST00000360001 MRPL54Q6P161 138 aaKnown RBP17.16■□□□□ 0.34
SDF4-202ENST00000360001 PGLYRP4Q96LB8 373 aa17.16■□□□□ 0.34
SDF4-202ENST00000360001 TRAV21A0A0B4J279 112 aa17.15■□□□□ 0.34
SDF4-202ENST00000360001 XKRY2A2RUG3 117 aa17.15■□□□□ 0.34
SDF4-202ENST00000360001 TRGC2P03986 189 aa17.15■□□□□ 0.34
SDF4-202ENST00000360001 RPS20P60866 119 aaKnown RBP17.15■□□□□ 0.34
SDF4-202ENST00000360001 BEAN1Q3B7T3 259 aa17.15■□□□□ 0.34
SDF4-202ENST00000360001 C1orf196B1AJZ1 125 aa17.14■□□□□ 0.33
SDF4-202ENST00000360001 OR11H12B2RN74 326 aa17.13■□□□□ 0.33
SDF4-202ENST00000360001 M0R2Z0 102 aa17.13■□□□□ 0.33
SDF4-202ENST00000360001 TRRAPQ9Y4A5 3859 aa17.13■□□□□ 0.33
SDF4-202ENST00000360001 RBMY1BA6NDE4 496 aaKnown RBP17.13■□□□□ 0.33
SDF4-202ENST00000360001 RBMY1EA6NEQ0 496 aaKnown RBP17.13■□□□□ 0.33
SDF4-202ENST00000360001 PHOX2AO14813 284 aa17.13■□□□□ 0.33
SDF4-202ENST00000360001 RBMY1DP0C7P1 496 aaKnown RBP17.13■□□□□ 0.33
SDF4-202ENST00000360001 CDKN1BP46527 198 aa17.13■□□□□ 0.33
SDF4-202ENST00000360001 INSL3P51460 131 aa17.13■□□□□ 0.33
SDF4-202ENST00000360001 C9orf66Q5T8R8 295 aa17.13■□□□□ 0.33
SDF4-202ENST00000360001 TSPOP30536 169 aa17.12■□□□□ 0.33
SDF4-202ENST00000360001 SPINK13Q1W4C9 94 aa17.12■□□□□ 0.33
SDF4-202ENST00000360001 ZFP82Q8N141 532 aa17.12■□□□□ 0.33
SDF4-202ENST00000360001 C3orf56Q8N813 242 aa17.12■□□□□ 0.33
SDF4-202ENST00000360001 A0A1B0GXF2 115 aa17.11■□□□□ 0.33
SDF4-202ENST00000360001 GRIFINA4D1Z8 144 aa17.11■□□□□ 0.33
SDF4-202ENST00000360001 CD7P09564 240 aa17.11■□□□□ 0.33
SDF4-202ENST00000360001 GFI1BQ5VTD9 330 aa17.11■□□□□ 0.33
SDF4-202ENST00000360001 ATP5L2Q7Z4Y8 100 aa17.11■□□□□ 0.33
SDF4-202ENST00000360001 STAB1Q9NY15 2570 aa17.11■□□□□ 0.33
SDF4-202ENST00000360001 C7orf71A4D174 169 aa17.11■□□□□ 0.33
SDF4-202ENST00000360001 IGLC6P0CF74 106 aa17.11■□□□□ 0.33
SDF4-202ENST00000360001 CMC4P56277 68 aaPredicted RBP17.11■□□□□ 0.33
SDF4-202ENST00000360001 WFDC9Q8NEX5 89 aa17.11■□□□□ 0.33
SDF4-202ENST00000360001 FAM110AQ9BQ89 295 aa17.11■□□□□ 0.33
SDF4-202ENST00000360001 NOTCH3Q9UM47 2321 aa17.1■□□□□ 0.33
SDF4-202ENST00000360001 TRAV12-2A0A075B6T6 113 aa17.1■□□□□ 0.33
SDF4-202ENST00000360001 TPPP3Q9BW30 176 aa17.1■□□□□ 0.33
SDF4-202ENST00000360001 C19orf73Q9NVV2 129 aa17.1■□□□□ 0.33
SDF4-202ENST00000360001 ZNF324O75467 553 aaPredicted RBP17.09■□□□□ 0.33
SDF4-202ENST00000360001 RAB5BP61020 215 aa17.09■□□□□ 0.33
SDF4-202ENST00000360001 RASL11AQ6T310 242 aa17.09■□□□□ 0.33
SDF4-202ENST00000360001 LYZL1Q6UWQ5 148 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms