RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 TMEM170BQ5T4T1 132 aa7.9□□□□□ -1.14
RNF40-202ENST00000357890 TRGV9Q99603 122 aa7.9□□□□□ -1.14
RNF40-202ENST00000357890 AGRNO00468 2067 aa7.9□□□□□ -1.14
RNF40-202ENST00000357890 EFNA4P52798 201 aa7.9□□□□□ -1.14
RNF40-202ENST00000357890 GAGE5Q13069 117 aa7.9□□□□□ -1.14
RNF40-202ENST00000357890 GAGE6Q13070 117 aa7.9□□□□□ -1.14
RNF40-202ENST00000357890 TMEM155Q4W5P6 130 aa7.9□□□□□ -1.14
RNF40-202ENST00000357890 M0R381 172 aa7.9□□□□□ -1.15
RNF40-202ENST00000357890 SIVA1O15304 175 aa7.9□□□□□ -1.15
RNF40-202ENST00000357890 TIMD4Q96H15 378 aa7.9□□□□□ -1.15
RNF40-202ENST00000357890 SIGLEC9Q9Y336 463 aa7.9□□□□□ -1.15
RNF40-202ENST00000357890 WNK1Q9H4A3 2382 aa7.89□□□□□ -1.15
RNF40-202ENST00000357890 K7EM74 188 aa7.89□□□□□ -1.15
RNF40-202ENST00000357890 HERVK_113P61574 105 aa7.89□□□□□ -1.15
RNF40-202ENST00000357890 HLA-DRB4P13762 266 aa7.89□□□□□ -1.15
RNF40-202ENST00000357890 APOBEC3AP31941 199 aaPredicted RBP7.89□□□□□ -1.15
RNF40-202ENST00000357890 RPL13AP40429 203 aaKnown RBP7.89□□□□□ -1.15
RNF40-202ENST00000357890 RRN3P1Q2M238 152 aa7.89□□□□□ -1.15
RNF40-202ENST00000357890 ZNF562Q6V9R5 426 aa7.89□□□□□ -1.15
RNF40-202ENST00000357890 CITED1Q99966 193 aa7.89□□□□□ -1.15
RNF40-202ENST00000357890 NXT2Q9NPJ8 142 aaKnown RBP7.89□□□□□ -1.15
RNF40-202ENST00000357890 MSRB1Q9NZV6 116 aa7.89□□□□□ -1.15
RNF40-202ENST00000357890 HLA-DRB4X5D2U9 266 aa7.89□□□□□ -1.15
RNF40-202ENST00000357890 MGAQ8IWI9 3026 aa7.89□□□□□ -1.15
RNF40-202ENST00000357890 C9JAW5 83 aa7.89□□□□□ -1.15
RNF40-202ENST00000357890 TRAV26-2A0A0B4J265 109 aa7.88□□□□□ -1.15
RNF40-202ENST00000357890 TNFRSF6BO95407 300 aa7.88□□□□□ -1.15
RNF40-202ENST00000357890 FGF6P10767 208 aa7.88□□□□□ -1.15
RNF40-202ENST00000357890 CFAP161Q6P656 301 aa7.88□□□□□ -1.15
RNF40-202ENST00000357890 LINC00311Q8N616 119 aa7.88□□□□□ -1.15
RNF40-202ENST00000357890 MSRB2Q9Y3D2 182 aa7.88□□□□□ -1.15
RNF40-202ENST00000357890 IGHV1-3A0A0C4DH29 117 aa7.88□□□□□ -1.15
RNF40-202ENST00000357890 B9A039 149 aa7.88□□□□□ -1.15
RNF40-202ENST00000357890 FOXI1Q12951 378 aa7.88□□□□□ -1.15
RNF40-202ENST00000357890 LINC01560Q8TB33 94 aa7.88□□□□□ -1.15
RNF40-202ENST00000357890 RNF125Q96EQ8 232 aa7.88□□□□□ -1.15
RNF40-202ENST00000357890 CSMD1Q96PZ7 3565 aa7.88□□□□□ -1.15
RNF40-202ENST00000357890 LOXP28300 417 aaPredicted RBP7.88□□□□□ -1.15
RNF40-202ENST00000357890 Q71RC1 249 aaPredicted RBP7.88□□□□□ -1.15
RNF40-202ENST00000357890 FAM208BQ5VWN6 2430 aa7.88□□□□□ -1.15
RNF40-202ENST00000357890 IGHV3-64A0A075B6Q5 118 aa7.87□□□□□ -1.15
RNF40-202ENST00000357890 TIMM23O14925 209 aa7.87□□□□□ -1.15
RNF40-202ENST00000357890 PPDPFLQ8WWR9 84 aa7.87□□□□□ -1.15
RNF40-202ENST00000357890 C1QTNF4Q9BXJ3 329 aa7.87□□□□□ -1.15
RNF40-202ENST00000357890 MYO18BQ8IUG5 2567 aa7.87□□□□□ -1.15
RNF40-202ENST00000357890 THAP8Q8NA92 274 aa7.87□□□□□ -1.15
RNF40-202ENST00000357890 CTSZQ9UBR2 303 aa7.87□□□□□ -1.15
RNF40-202ENST00000357890 IGKV1D-37A0A075B6S9 117 aa7.87□□□□□ -1.15
RNF40-202ENST00000357890 ATMQ13315 3056 aa7.87□□□□□ -1.15
RNF40-202ENST00000357890 ANKRD11Q6UB99 2663 aaPredicted RBP7.87□□□□□ -1.15
RNF40-202ENST00000357890 TMEM262E9PQX1 116 aa7.86□□□□□ -1.15
RNF40-202ENST00000357890 GATA3P23771 443 aa7.86□□□□□ -1.15
RNF40-202ENST00000357890 DLX6P56179 175 aa7.86□□□□□ -1.15
RNF40-202ENST00000357890 PTPN13Q12923 2485 aa7.86□□□□□ -1.15
RNF40-202ENST00000357890 INS-IGF2F8WCM5 200 aa7.86□□□□□ -1.15
RNF40-202ENST00000357890 TMEM78Q5T7P6 136 aa7.86□□□□□ -1.15
RNF40-202ENST00000357890 LY6HO94772 140 aa7.86□□□□□ -1.15
RNF40-202ENST00000357890 TSPAN13O95857 204 aa7.86□□□□□ -1.15
RNF40-202ENST00000357890 MFAP4P55083 255 aa7.86□□□□□ -1.15
RNF40-202ENST00000357890 TCTEX1D4Q5JR98 221 aa7.86□□□□□ -1.15
RNF40-202ENST00000357890 C8orf31Q8N9H6 132 aa7.86□□□□□ -1.15
RNF40-202ENST00000357890 COL27A1Q8IZC6 1860 aaPredicted RBP7.86□□□□□ -1.15
RNF40-202ENST00000357890 DMXL2Q8TDJ6 3036 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 C19orf71A6NCJ1 209 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 GAGE12JA6NER3 117 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 GAGE7O76087 117 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 GAGE12FP0CL80 117 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 GAGE12GP0CL81 117 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 GAGE12IP0CL82 117 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 GAGE4Q13068 117 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 Q6ZUT4 128 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.85□□□□□ -1.15
RNF40-202ENST00000357890 BUB1B-PAK6H3BSN5 160 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 SLC25A16P16260 332 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 LAGE3Q14657 143 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 IGFBPL1Q8WX77 278 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 KIR2DL4Q99706 377 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 PIEZO1Q92508 2521 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 TRAV2A0A0B4J234 112 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 E7EQL1 145 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 LGALS3P17931 250 aaKnown RBP7.85□□□□□ -1.15
RNF40-202ENST00000357890 DPM3Q9P2X0 92 aa7.85□□□□□ -1.15
RNF40-202ENST00000357890 SPRY2O43597 315 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 ECSCRQ19T08 205 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 TMEM95Q3KNT9 176 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 PRSS22Q9GZN4 317 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 RAB1BQ9H0U4 201 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 KAAG1Q9UBP8 84 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 SMPXQ9UHP9 88 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 KLF12Q9Y4X4 402 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 FABP5P3A8MUU1 101 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 IGLV2-23P01705 113 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 THBDP07204 575 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 GP9P14770 177 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 PSMG4Q5JS54 123 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 UBTD1Q9HAC8 227 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 ZNF256Q9Y2P7 627 aaPredicted RBP7.84□□□□□ -1.15
RNF40-202ENST00000357890 TRAV8-4A0A0B4J246 113 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 E9PLD3 99 aa7.84□□□□□ -1.15
RNF40-202ENST00000357890 ERCC8Q13216 396 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 336.7 ms