RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 A0A0G2JLM5 398 aa17.01■□□□□ 0.31
NKX2-1-201ENST00000354822 DLEU1O43261 78 aa17.01■□□□□ 0.31
NKX2-1-201ENST00000354822 LINC00477Q96M19 166 aa17.01■□□□□ 0.31
NKX2-1-201ENST00000354822 CFAP46Q8IYW2 2715 aa17.01■□□□□ 0.31
NKX2-1-201ENST00000354822 LOXL1Q08397 574 aaPredicted RBP17■□□□□ 0.31
NKX2-1-201ENST00000354822 SMKR1H3BMG3 65 aa16.99■□□□□ 0.31
NKX2-1-201ENST00000354822 UNQ9165/PRO28630Q6UXU0 137 aa16.99■□□□□ 0.31
NKX2-1-201ENST00000354822 SMIM15Q7Z3B0 74 aa16.99■□□□□ 0.31
NKX2-1-201ENST00000354822 SCRT2Q9NQ03 307 aa16.99■□□□□ 0.31
NKX2-1-201ENST00000354822 DOPEY1Q5JWR5 2465 aa16.99■□□□□ 0.31
NKX2-1-201ENST00000354822 OVOL1O14753 267 aa16.99■□□□□ 0.31
NKX2-1-201ENST00000354822 HINT1P49773 126 aaPredicted RBP16.99■□□□□ 0.31
NKX2-1-201ENST00000354822 PRSS57Q6UWY2 283 aa16.99■□□□□ 0.31
NKX2-1-201ENST00000354822 C11orf21Q9P2W6 132 aa16.99■□□□□ 0.31
NKX2-1-201ENST00000354822 LINC01546A6NGU7 62 aa16.98■□□□□ 0.31
NKX2-1-201ENST00000354822 SMAD7O15105 426 aaKnown RBP16.98■□□□□ 0.31
NKX2-1-201ENST00000354822 TRBV12-3P01733 135 aa16.98■□□□□ 0.31
NKX2-1-201ENST00000354822 PF4V1P10720 104 aa16.98■□□□□ 0.31
NKX2-1-201ENST00000354822 TFPI2P48307 235 aa16.98■□□□□ 0.31
NKX2-1-201ENST00000354822 LGALS9BQ3B8N2 356 aa16.98■□□□□ 0.31
NKX2-1-201ENST00000354822 LGALS9CQ6DKI2 356 aa16.98■□□□□ 0.31
NKX2-1-201ENST00000354822 ZNF738Q8NE65 137 aa16.98■□□□□ 0.31
NKX2-1-201ENST00000354822 BLCAPP62952 87 aa16.98■□□□□ 0.31
NKX2-1-201ENST00000354822 OR4X2Q8NGF9 303 aa16.98■□□□□ 0.31
NKX2-1-201ENST00000354822 OR8A1Q8NGG7 326 aa16.98■□□□□ 0.31
NKX2-1-201ENST00000354822 DPF1Q92782 380 aa16.98■□□□□ 0.31
NKX2-1-201ENST00000354822 MCRIP2Q9BUT9 160 aaKnown RBP16.98■□□□□ 0.31
NKX2-1-201ENST00000354822 NXT2Q9NPJ8 142 aaKnown RBP16.98■□□□□ 0.31
NKX2-1-201ENST00000354822 NCR2O95944 276 aa16.97■□□□□ 0.31
NKX2-1-201ENST00000354822 IGLV1-40P01703 118 aa16.97■□□□□ 0.31
NKX2-1-201ENST00000354822 ZNF843Q8N446 348 aa16.97■□□□□ 0.31
NKX2-1-201ENST00000354822 ZNF580Q9UK33 172 aa16.97■□□□□ 0.31
NKX2-1-201ENST00000354822 CACNG7P62955 275 aa16.96■□□□□ 0.31
NKX2-1-201ENST00000354822 IGHV4-4A0A075B6R2 117 aa16.96■□□□□ 0.31
NKX2-1-201ENST00000354822 OR10J6PQ8NGY7 276 aa16.96■□□□□ 0.31
NKX2-1-201ENST00000354822 PMCHL2Q9BQD1 86 aa16.96■□□□□ 0.31
NKX2-1-201ENST00000354822 KLK15Q9H2R5 256 aa16.96■□□□□ 0.31
NKX2-1-201ENST00000354822 GOLT1BQ9Y3E0 138 aa16.96■□□□□ 0.31
NKX2-1-201ENST00000354822 TNFRSF6BO95407 300 aa16.95■□□□□ 0.3
NKX2-1-201ENST00000354822 C20orf173Q96LM9 149 aa16.95■□□□□ 0.3
NKX2-1-201ENST00000354822 IGHV7-4-1A0A0J9YVY3 117 aa16.95■□□□□ 0.3
NKX2-1-201ENST00000354822 SOCS3O14543 225 aa16.95■□□□□ 0.3
NKX2-1-201ENST00000354822 SLC25A16P16260 332 aa16.95■□□□□ 0.3
NKX2-1-201ENST00000354822 GPHB5Q86YW7 130 aa16.95■□□□□ 0.3
NKX2-1-201ENST00000354822 SNAI2O43623 268 aa16.94■□□□□ 0.3
NKX2-1-201ENST00000354822 IGHV3-11P01762 117 aa16.94■□□□□ 0.3
NKX2-1-201ENST00000354822 COX6B1P14854 86 aa16.94■□□□□ 0.3
NKX2-1-201ENST00000354822 IFI27L1Q96BM0 104 aa16.94■□□□□ 0.3
NKX2-1-201ENST00000354822 NRGNQ92686 78 aa16.94■□□□□ 0.3
NKX2-1-201ENST00000354822 FOXE3Q13461 319 aa16.93■□□□□ 0.3
NKX2-1-201ENST00000354822 SPTAN1Q13813 2472 aaKnown RBP16.93■□□□□ 0.3
NKX2-1-201ENST00000354822 COX8AP10176 69 aa16.92■□□□□ 0.3
NKX2-1-201ENST00000354822 CFHR3Q02985 330 aa16.92■□□□□ 0.3
NKX2-1-201ENST00000354822 OR1N2Q8NGR9 330 aa16.92■□□□□ 0.3
NKX2-1-201ENST00000354822 AVPP01185 164 aa16.92■□□□□ 0.3
NKX2-1-201ENST00000354822 USP24Q9UPU5 2620 aa16.91■□□□□ 0.3
NKX2-1-201ENST00000354822 TRAV21A0A0B4J279 112 aa16.91■□□□□ 0.3
NKX2-1-201ENST00000354822 FCER1GP30273 86 aa16.91■□□□□ 0.3
NKX2-1-201ENST00000354822 SPANXN1Q5VSR9 72 aa16.91■□□□□ 0.3
NKX2-1-201ENST00000354822 C12orf54Q6X4T0 127 aa16.91■□□□□ 0.3
NKX2-1-201ENST00000354822 Q6ZS46 218 aa16.91■□□□□ 0.3
NKX2-1-201ENST00000354822 ORAOV1Q8WV07 137 aa16.91■□□□□ 0.3
NKX2-1-201ENST00000354822 TRBV7-9A0A0J9YWB2 115 aa16.91■□□□□ 0.3
NKX2-1-201ENST00000354822 PRSS47A8MTI9 375 aa16.91■□□□□ 0.3
NKX2-1-201ENST00000354822 EVI2AP22794 236 aa16.91■□□□□ 0.3
NKX2-1-201ENST00000354822 SRSF1Q07955 248 aaKnown RBP eCLIP16.91■□□□□ 0.3
NKX2-1-201ENST00000354822 DEFB125Q8N687 156 aa16.91■□□□□ 0.3
NKX2-1-201ENST00000354822 LINC01356Q8N9X3 169 aa16.91■□□□□ 0.3
NKX2-1-201ENST00000354822 DAZ1Q9NQZ3 744 aaKnown RBP16.91■□□□□ 0.3
NKX2-1-201ENST00000354822 K7EMT4 169 aa16.9■□□□□ 0.3
NKX2-1-201ENST00000354822 RPL11P62913 178 aaKnown RBP16.9■□□□□ 0.3
NKX2-1-201ENST00000354822 Q8N8P6 123 aa16.9■□□□□ 0.3
NKX2-1-201ENST00000354822 RHPN1-AS1Q9BWJ2 59 aa16.9■□□□□ 0.3
NKX2-1-201ENST00000354822 FXYD7P58549 80 aa16.89■□□□□ 0.3
NKX2-1-201ENST00000354822 ZFAND2AQ8N6M9 145 aa16.89■□□□□ 0.3
NKX2-1-201ENST00000354822 OR2K2Q8NGT1 345 aa16.89■□□□□ 0.3
NKX2-1-201ENST00000354822 ZNF124Q15973 351 aa16.89■□□□□ 0.29
NKX2-1-201ENST00000354822 PEF1Q9UBV8 284 aaKnown RBP16.89■□□□□ 0.29
NKX2-1-201ENST00000354822 USP9XQ93008 2570 aaPredicted RBP16.88■□□□□ 0.29
NKX2-1-201ENST00000354822 GAS8-AS1O95177 125 aa16.88■□□□□ 0.29
NKX2-1-201ENST00000354822 LEPP41159 167 aa16.88■□□□□ 0.29
NKX2-1-201ENST00000354822 MPV17L2Q567V2 206 aa16.88■□□□□ 0.29
NKX2-1-201ENST00000354822 SAMD13Q5VXD3 122 aa16.88■□□□□ 0.29
NKX2-1-201ENST00000354822 J3QLI3 93 aa16.88■□□□□ 0.29
NKX2-1-201ENST00000354822 PSMG4Q5JS54 123 aa16.88■□□□□ 0.29
NKX2-1-201ENST00000354822 PRR9Q5T870 116 aa16.88■□□□□ 0.29
NKX2-1-201ENST00000354822 FAM19A4Q96LR4 140 aa16.88■□□□□ 0.29
NKX2-1-201ENST00000354822 NUDT3O95989 172 aa16.87■□□□□ 0.29
NKX2-1-201ENST00000354822 SMPXQ9UHP9 88 aa16.87■□□□□ 0.29
NKX2-1-201ENST00000354822 NPSP0C0P6 89 aa16.87■□□□□ 0.29
NKX2-1-201ENST00000354822 TM4SF20Q53R12 229 aa16.87■□□□□ 0.29
NKX2-1-201ENST00000354822 COX11Q9Y6N1 276 aa16.87■□□□□ 0.29
NKX2-1-201ENST00000354822 TMEM89A2RUT3 159 aa16.86■□□□□ 0.29
NKX2-1-201ENST00000354822 APRG1Q8IVJ8 170 aa16.86■□□□□ 0.29
NKX2-1-201ENST00000354822 MRAP2Q96G30 205 aa16.86■□□□□ 0.29
NKX2-1-201ENST00000354822 UFC1Q9Y3C8 167 aa16.86■□□□□ 0.29
NKX2-1-201ENST00000354822 A1L4Q6 167 aa16.85■□□□□ 0.29
NKX2-1-201ENST00000354822 H3BVH4 76 aa16.85■□□□□ 0.29
NKX2-1-201ENST00000354822 GATA1P15976 413 aaPredicted RBP16.85■□□□□ 0.29
NKX2-1-201ENST00000354822 BVES-AS1Q5T3Y7 98 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms