RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 I3L2K1 104 aa10.73□□□□□ -0.69
SMC6-201ENST00000351948 MALP21145 153 aa10.73□□□□□ -0.69
SMC6-201ENST00000351948 RPL36AP83881 106 aaKnown RBP10.73□□□□□ -0.69
SMC6-201ENST00000351948 RPL36ALQ969Q0 106 aaKnown RBP10.73□□□□□ -0.69
SMC6-201ENST00000351948 CSTL1Q9H114 145 aa10.73□□□□□ -0.69
SMC6-201ENST00000351948 DOPEY1Q5JWR5 2465 aa10.73□□□□□ -0.69
SMC6-201ENST00000351948 LINC01548A6NM66 108 aa10.73□□□□□ -0.69
SMC6-201ENST00000351948 ANXA2RQ3ZCQ2 193 aa10.73□□□□□ -0.69
SMC6-201ENST00000351948 CD300EQ496F6 205 aaPredicted RBP10.73□□□□□ -0.69
SMC6-201ENST00000351948 TMEM238LA0A1B0GVL6 79 aa10.72□□□□□ -0.69
SMC6-201ENST00000351948 A6NJY4 79 aa10.72□□□□□ -0.69
SMC6-201ENST00000351948 SMPXQ9UHP9 88 aa10.72□□□□□ -0.69
SMC6-201ENST00000351948 TSSC4Q9Y5U2 329 aaPredicted RBP10.72□□□□□ -0.69
SMC6-201ENST00000351948 CTSGP08311 255 aa10.72□□□□□ -0.69
SMC6-201ENST00000351948 LGALS1P09382 135 aaKnown RBP10.72□□□□□ -0.69
SMC6-201ENST00000351948 IFI27L1Q96BM0 104 aa10.72□□□□□ -0.69
SMC6-201ENST00000351948 MS4A6AQ9H2W1 248 aa10.72□□□□□ -0.69
SMC6-201ENST00000351948 IGLV11-55A0A075B6I3 123 aa10.72□□□□□ -0.69
SMC6-201ENST00000351948 ORMDL2Q53FV1 153 aa10.72□□□□□ -0.69
SMC6-201ENST00000351948 C1orf159Q96HA4 380 aa10.72□□□□□ -0.69
SMC6-201ENST00000351948 LY96Q9Y6Y9 160 aa10.72□□□□□ -0.69
SMC6-201ENST00000351948 GAGE12BA1L429 117 aa10.72□□□□□ -0.69
SMC6-201ENST00000351948 GAGE7O76087 117 aa10.72□□□□□ -0.69
SMC6-201ENST00000351948 GAGE12FP0CL80 117 aa10.72□□□□□ -0.69
SMC6-201ENST00000351948 GAGE12GP0CL81 117 aa10.72□□□□□ -0.69
SMC6-201ENST00000351948 GAGE12IP0CL82 117 aa10.72□□□□□ -0.69
SMC6-201ENST00000351948 COL5A1-AS1Q5SY13 56 aa10.72□□□□□ -0.69
SMC6-201ENST00000351948 C1orf229Q6ZS94 237 aaPredicted RBP10.72□□□□□ -0.69
SMC6-201ENST00000351948 HIST1H2BLQ99880 126 aa10.72□□□□□ -0.69
SMC6-201ENST00000351948 ADARB2-AS1A8MUL3 147 aa10.71□□□□□ -0.69
SMC6-201ENST00000351948 ZC2HC1AQ96GY0 325 aa10.71□□□□□ -0.69
SMC6-201ENST00000351948 CDKN1BP46527 198 aa10.71□□□□□ -0.69
SMC6-201ENST00000351948 PRUNE2Q8WUY3 3088 aa10.71□□□□□ -0.69
SMC6-201ENST00000351948 TRAV26-2A0A0B4J265 109 aa10.71□□□□□ -0.69
SMC6-201ENST00000351948 HIST2H2BDQ6DRA6 164 aa10.71□□□□□ -0.69
SMC6-201ENST00000351948 LAMA2P24043 3122 aaKnown RBP10.71□□□□□ -0.7
SMC6-201ENST00000351948 TEX22C9J3V5 150 aa10.71□□□□□ -0.7
SMC6-201ENST00000351948 LAGE3Q14657 143 aa10.71□□□□□ -0.7
SMC6-201ENST00000351948 SFTA2Q6UW10 78 aa10.71□□□□□ -0.7
SMC6-201ENST00000351948 H3BRM9 83 aa10.71□□□□□ -0.7
SMC6-201ENST00000351948 DEFB1P60022 68 aa10.71□□□□□ -0.7
SMC6-201ENST00000351948 UBE2DNLQ8IWF7 75 aa10.71□□□□□ -0.7
SMC6-201ENST00000351948 ALKBH7Q9BT30 221 aaPredicted RBP10.71□□□□□ -0.7
SMC6-201ENST00000351948 CRPP02741 224 aa10.7□□□□□ -0.7
SMC6-201ENST00000351948 LINC00469Q8N7U9 141 aa10.7□□□□□ -0.7
SMC6-201ENST00000351948 F5H768 121 aa10.7□□□□□ -0.7
SMC6-201ENST00000351948 APOMO95445 188 aa10.7□□□□□ -0.7
SMC6-201ENST00000351948 TMEM14CQ9P0S9 112 aa10.7□□□□□ -0.7
SMC6-201ENST00000351948 IGHV4OR15-8A0A075B7B6 117 aa10.7□□□□□ -0.7
SMC6-201ENST00000351948 A0A087WW49 117 aa10.7□□□□□ -0.7
SMC6-201ENST00000351948 GAGE12JA6NER3 117 aa10.7□□□□□ -0.7
SMC6-201ENST00000351948 GAGE1Q13065 139 aa10.7□□□□□ -0.7
SMC6-201ENST00000351948 GAGE4Q13068 117 aa10.7□□□□□ -0.7
SMC6-201ENST00000351948 GAGE5Q13069 117 aa10.7□□□□□ -0.7
SMC6-201ENST00000351948 GAGE13Q4V321 117 aa10.7□□□□□ -0.7
SMC6-201ENST00000351948 CFAP161Q6P656 301 aa10.7□□□□□ -0.7
SMC6-201ENST00000351948 IGKV1OR2-108A0A075B7D4 117 aa10.69□□□□□ -0.7
SMC6-201ENST00000351948 TRBV12-3P01733 135 aa10.69□□□□□ -0.7
SMC6-201ENST00000351948 SRSF2Q01130 221 aaKnown RBP10.69□□□□□ -0.7
SMC6-201ENST00000351948 ERASQ7Z444 233 aa10.69□□□□□ -0.7
SMC6-201ENST00000351948 AMBPP02760 352 aa10.69□□□□□ -0.7
SMC6-201ENST00000351948 PATE2Q6UY27 113 aa10.69□□□□□ -0.7
SMC6-201ENST00000351948 IGHV1OR15-1A0A075B7D0 117 aa10.69□□□□□ -0.7
SMC6-201ENST00000351948 FOXE3Q13461 319 aa10.69□□□□□ -0.7
SMC6-201ENST00000351948 NEGR1Q7Z3B1 354 aa10.69□□□□□ -0.7
SMC6-201ENST00000351948 AGPAT4-IT1Q9H0P7 198 aa10.69□□□□□ -0.7
SMC6-201ENST00000351948 CHTOPQ9Y3Y2 248 aaKnown RBP10.69□□□□□ -0.7
SMC6-201ENST00000351948 TANC2Q9HCD6 1990 aa10.68□□□□□ -0.7
SMC6-201ENST00000351948 A0A096LPF7 62 aa10.68□□□□□ -0.7
SMC6-201ENST00000351948 TMEM158Q8WZ71 300 aa10.68□□□□□ -0.7
SMC6-201ENST00000351948 TRAV13-1A0A0B4J241 112 aa10.68□□□□□ -0.7
SMC6-201ENST00000351948 IGHV3-38A0A0C4DH36 116 aa10.68□□□□□ -0.7
SMC6-201ENST00000351948 CGB3P0DN86 165 aa10.68□□□□□ -0.7
SMC6-201ENST00000351948 CGB7P0DN87 165 aa10.68□□□□□ -0.7
SMC6-201ENST00000351948 FLNBO75369 2602 aaKnown RBP10.68□□□□□ -0.7
SMC6-201ENST00000351948 H3BUA1 57 aa10.68□□□□□ -0.7
SMC6-201ENST00000351948 BRWD1-AS2P59051 145 aa10.68□□□□□ -0.7
SMC6-201ENST00000351948 HIST3H2BBQ8N257 126 aa10.68□□□□□ -0.7
SMC6-201ENST00000351948 DPM2O94777 84 aa10.67□□□□□ -0.7
SMC6-201ENST00000351948 COX6CP09669 75 aa10.67□□□□□ -0.7
SMC6-201ENST00000351948 OR2K2Q8NGT1 345 aa10.67□□□□□ -0.7
SMC6-201ENST00000351948 GNRH2O43555 120 aa10.67□□□□□ -0.7
SMC6-201ENST00000351948 JOSD1Q15040 202 aaPredicted RBP10.67□□□□□ -0.7
SMC6-201ENST00000351948 DAD1P61803 113 aa10.66□□□□□ -0.7
SMC6-201ENST00000351948 PLA2G2EQ9NZK7 142 aa10.66□□□□□ -0.7
SMC6-201ENST00000351948 KMT2EQ8IZD2 1858 aa10.66□□□□□ -0.7
SMC6-201ENST00000351948 VCYO14598 125 aa10.66□□□□□ -0.7
SMC6-201ENST00000351948 TNFRSF6BO95407 300 aa10.66□□□□□ -0.7
SMC6-201ENST00000351948 AZU1P20160 251 aa10.66□□□□□ -0.7
SMC6-201ENST00000351948 PRSS57Q6UWY2 283 aa10.66□□□□□ -0.7
SMC6-201ENST00000351948 CHCHD1Q96BP2 118 aaKnown RBP10.66□□□□□ -0.7
SMC6-201ENST00000351948 CITED2Q99967 270 aaPredicted RBP10.66□□□□□ -0.7
SMC6-201ENST00000351948 CHD9Q3L8U1 2897 aa10.66□□□□□ -0.7
SMC6-201ENST00000351948 IGHV4-31P0DP07 118 aa10.66□□□□□ -0.7
SMC6-201ENST00000351948 LOXL1Q08397 574 aaPredicted RBP10.66□□□□□ -0.7
SMC6-201ENST00000351948 VWC2Q2TAL6 325 aa10.66□□□□□ -0.7
SMC6-201ENST00000351948 TMEM190Q8WZ59 177 aa10.66□□□□□ -0.7
SMC6-201ENST00000351948 DMRT1Q9Y5R6 373 aa10.66□□□□□ -0.7
SMC6-201ENST00000351948 GAGE10A6NGK3 116 aa10.66□□□□□ -0.7
SMC6-201ENST00000351948 DNAJC9-AS1A6NH13 148 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms