RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 CST9LQ9H4G1 147 aa12.66□□□□□ -0.38
PTPN11-201ENST00000351677 DKK4Q9UBT3 224 aa12.66□□□□□ -0.38
PTPN11-201ENST00000351677 HOXB4P17483 251 aaPredicted RBP12.66□□□□□ -0.38
PTPN11-201ENST00000351677 Q6ZSR3 168 aa12.66□□□□□ -0.38
PTPN11-201ENST00000351677 GAGE12JA6NER3 117 aa12.66□□□□□ -0.38
PTPN11-201ENST00000351677 GAGE1Q13065 139 aa12.66□□□□□ -0.38
PTPN11-201ENST00000351677 GAGE4Q13068 117 aa12.66□□□□□ -0.38
PTPN11-201ENST00000351677 GAGE5Q13069 117 aa12.66□□□□□ -0.38
PTPN11-201ENST00000351677 C2orf82Q6UX34 121 aa12.66□□□□□ -0.38
PTPN11-201ENST00000351677 IGHV1OR15-1A0A075B7D0 117 aa12.66□□□□□ -0.38
PTPN11-201ENST00000351677 LTAP01374 205 aa12.65□□□□□ -0.38
PTPN11-201ENST00000351677 SDHAF1A6NFY7 115 aa12.65□□□□□ -0.38
PTPN11-201ENST00000351677 RITA1Q96K30 269 aa12.65□□□□□ -0.38
PTPN11-201ENST00000351677 MED13Q9UHV7 2174 aa12.65□□□□□ -0.38
PTPN11-201ENST00000351677 TRAV8-3A0A0A6YYJ7 113 aa12.64□□□□□ -0.39
PTPN11-201ENST00000351677 CR1LQ2VPA4 569 aa12.64□□□□□ -0.39
PTPN11-201ENST00000351677 IGFL2Q6UWQ7 119 aa12.64□□□□□ -0.39
PTPN11-201ENST00000351677 SLX1AQ9BQ83 275 aa12.64□□□□□ -0.39
PTPN11-201ENST00000351677 IGHV3-38A0A0C4DH36 116 aa12.64□□□□□ -0.39
PTPN11-201ENST00000351677 CDKN1BP46527 198 aa12.64□□□□□ -0.39
PTPN11-201ENST00000351677 I3L3M4 83 aa12.63□□□□□ -0.39
PTPN11-201ENST00000351677 ADAMTSL5Q6ZMM2 481 aa12.63□□□□□ -0.39
PTPN11-201ENST00000351677 GHRHP01286 108 aa12.63□□□□□ -0.39
PTPN11-201ENST00000351677 C2orf16Q68DN1 1984 aa12.63□□□□□ -0.39
PTPN11-201ENST00000351677 LEPROTO15243 131 aa12.63□□□□□ -0.39
PTPN11-201ENST00000351677 NBL1P41271 181 aa12.63□□□□□ -0.39
PTPN11-201ENST00000351677 DYNAPQ8N1N2 210 aa12.63□□□□□ -0.39
PTPN11-201ENST00000351677 CREBBPQ92793 2442 aa12.63□□□□□ -0.39
PTPN11-201ENST00000351677 PMVKQ15126 192 aa12.63□□□□□ -0.39
PTPN11-201ENST00000351677 C8orf31Q8N9H6 132 aa12.63□□□□□ -0.39
PTPN11-201ENST00000351677 F6UB75 175 aa12.63□□□□□ -0.39
PTPN11-201ENST00000351677 MAJINQ3KP22 176 aa12.63□□□□□ -0.39
PTPN11-201ENST00000351677 GTSF1LQ9H1H1 148 aa12.62□□□□□ -0.39
PTPN11-201ENST00000351677 A0A1W2PNU3 283 aaPredicted RBP12.62□□□□□ -0.39
PTPN11-201ENST00000351677 CDPF1Q6NVV7 123 aa12.62□□□□□ -0.39
PTPN11-201ENST00000351677 KMT2EQ8IZD2 1858 aa12.62□□□□□ -0.39
PTPN11-201ENST00000351677 TMEM141Q96I45 108 aa12.62□□□□□ -0.39
PTPN11-201ENST00000351677 MRPL35Q9NZE8 188 aaKnown RBP12.62□□□□□ -0.39
PTPN11-201ENST00000351677 IGHV7-4-1A0A0J9YVY3 117 aa12.62□□□□□ -0.39
PTPN11-201ENST00000351677 C9JAW5 83 aa12.62□□□□□ -0.39
PTPN11-201ENST00000351677 AZU1P20160 251 aa12.61□□□□□ -0.39
PTPN11-201ENST00000351677 DEFB121Q5J5C9 76 aa12.61□□□□□ -0.39
PTPN11-201ENST00000351677 MORN5Q5VZ52 161 aa12.61□□□□□ -0.39
PTPN11-201ENST00000351677 RNF114Q9Y508 228 aa12.61□□□□□ -0.39
PTPN11-201ENST00000351677 ZFHX2Q9C0A1 2572 aaPredicted RBP12.61□□□□□ -0.39
PTPN11-201ENST00000351677 RHODO00212 210 aa12.61□□□□□ -0.39
PTPN11-201ENST00000351677 EGR2P11161 476 aaPredicted RBP12.61□□□□□ -0.39
PTPN11-201ENST00000351677 LGALS9BQ3B8N2 356 aa12.61□□□□□ -0.39
PTPN11-201ENST00000351677 LGALS9CQ6DKI2 356 aa12.61□□□□□ -0.39
PTPN11-201ENST00000351677 GAGE2BQ13066 116 aa12.6□□□□□ -0.39
PTPN11-201ENST00000351677 GAGE2EQ4V326 116 aa12.6□□□□□ -0.39
PTPN11-201ENST00000351677 OCIAD2Q56VL3 154 aa12.6□□□□□ -0.39
PTPN11-201ENST00000351677 GAGE2DQ9UEU5 116 aa12.6□□□□□ -0.39
PTPN11-201ENST00000351677 SS18Q15532 418 aa12.6□□□□□ -0.39
PTPN11-201ENST00000351677 COX8AP10176 69 aa12.6□□□□□ -0.39
PTPN11-201ENST00000351677 FOXE3Q13461 319 aa12.6□□□□□ -0.39
PTPN11-201ENST00000351677 SMIM2Q9BVW6 85 aa12.6□□□□□ -0.39
PTPN11-201ENST00000351677 SPRY2O43597 315 aa12.6□□□□□ -0.39
PTPN11-201ENST00000351677 ZNRF2Q8NHG8 242 aa12.6□□□□□ -0.39
PTPN11-201ENST00000351677 EML6Q6ZMW3 1958 aa12.59□□□□□ -0.39
PTPN11-201ENST00000351677 GAGE7O76087 117 aa12.59□□□□□ -0.39
PTPN11-201ENST00000351677 GAGE12FP0CL80 117 aa12.59□□□□□ -0.39
PTPN11-201ENST00000351677 GAGE12GP0CL81 117 aa12.59□□□□□ -0.39
PTPN11-201ENST00000351677 GAGE12IP0CL82 117 aa12.59□□□□□ -0.39
PTPN11-201ENST00000351677 CFHR4Q92496 578 aa12.59□□□□□ -0.39
PTPN11-201ENST00000351677 AGPAT4-IT1Q9H0P7 198 aa12.59□□□□□ -0.39
PTPN11-201ENST00000351677 GNRH2O43555 120 aa12.59□□□□□ -0.39
PTPN11-201ENST00000351677 WISP2O76076 250 aa12.59□□□□□ -0.39
PTPN11-201ENST00000351677 DKK2Q9UBU2 259 aa12.59□□□□□ -0.39
PTPN11-201ENST00000351677 LAMTOR3Q9UHA4 124 aa12.59□□□□□ -0.39
PTPN11-201ENST00000351677 VWC2LB2RUY7 222 aa12.58□□□□□ -0.4
PTPN11-201ENST00000351677 ZFAND6Q6FIF0 208 aa12.58□□□□□ -0.4
PTPN11-201ENST00000351677 OR11H6Q8NGC7 330 aa12.58□□□□□ -0.4
PTPN11-201ENST00000351677 Q71RC1 249 aaPredicted RBP12.58□□□□□ -0.4
PTPN11-201ENST00000351677 IGHV4-59P01825 116 aa12.58□□□□□ -0.4
PTPN11-201ENST00000351677 NPSP0C0P6 89 aa12.57□□□□□ -0.4
PTPN11-201ENST00000351677 UBE2DNLQ8IWF7 75 aa12.57□□□□□ -0.4
PTPN11-201ENST00000351677 TCF15Q12870 199 aa12.57□□□□□ -0.4
PTPN11-201ENST00000351677 DEFB112Q30KQ8 113 aa12.57□□□□□ -0.4
PTPN11-201ENST00000351677 SEM1Q6ZVN7 128 aa12.57□□□□□ -0.4
PTPN11-201ENST00000351677 C9orf118A6NHY6 69 aa12.56□□□□□ -0.4
PTPN11-201ENST00000351677 J3QLI3 93 aa12.56□□□□□ -0.4
PTPN11-201ENST00000351677 IGLV2-14P01704 120 aa12.56□□□□□ -0.4
PTPN11-201ENST00000351677 PATE2Q6UY27 113 aa12.56□□□□□ -0.4
PTPN11-201ENST00000351677 I3L2K1 104 aa12.56□□□□□ -0.4
PTPN11-201ENST00000351677 LGALS1P09382 135 aaKnown RBP12.56□□□□□ -0.4
PTPN11-201ENST00000351677 HIST1H4AP62805 103 aaKnown RBP12.56□□□□□ -0.4
PTPN11-201ENST00000351677 TRBV25-1A0A075B6N4 114 aa12.56□□□□□ -0.4
PTPN11-201ENST00000351677 HLA-DRB4P13762 266 aa12.56□□□□□ -0.4
PTPN11-201ENST00000351677 RNASE13Q5GAN3 156 aaKnown RBP12.56□□□□□ -0.4
PTPN11-201ENST00000351677 HLA-DRB4X5D2U9 266 aa12.56□□□□□ -0.4
PTPN11-201ENST00000351677 CENPVL3A0A0U1RRI6 287 aa12.55□□□□□ -0.4
PTPN11-201ENST00000351677 K7EIM0 57 aa12.55□□□□□ -0.4
PTPN11-201ENST00000351677 GP9P14770 177 aa12.55□□□□□ -0.4
PTPN11-201ENST00000351677 F5H768 121 aa12.55□□□□□ -0.4
PTPN11-201ENST00000351677 BVES-AS1Q5T3Y7 98 aa12.55□□□□□ -0.4
PTPN11-201ENST00000351677 IGHV7-81A0A0B4J1V7 117 aa12.55□□□□□ -0.4
PTPN11-201ENST00000351677 PFN2P35080 140 aa12.55□□□□□ -0.4
PTPN11-201ENST00000351677 F8VRH5 84 aa12.55□□□□□ -0.4
PTPN11-201ENST00000351677 GATA1P15976 413 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms