RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 NRGNQ92686 78 aa15.44■□□□□ 0.06
SPG7-202ENST00000341316 NDUFS8O00217 210 aa15.43■□□□□ 0.06
SPG7-202ENST00000341316 CRIP2P52943 208 aaPredicted RBP15.43■□□□□ 0.06
SPG7-202ENST00000341316 U3KQE9 123 aa15.43■□□□□ 0.06
SPG7-202ENST00000341316 U3KQK5 164 aa15.43■□□□□ 0.06
SPG7-202ENST00000341316 POLQO75417 2590 aa15.43■□□□□ 0.06
SPG7-202ENST00000341316 TRGV3P03979 118 aa15.43■□□□□ 0.06
SPG7-202ENST00000341316 METTL26Q96S19 204 aa15.43■□□□□ 0.06
SPG7-202ENST00000341316 TRBV12-3P01733 135 aa15.42■□□□□ 0.06
SPG7-202ENST00000341316 FXYD7P58549 80 aa15.42■□□□□ 0.06
SPG7-202ENST00000341316 ZNF462Q96JM2 2506 aa15.42■□□□□ 0.06
SPG7-202ENST00000341316 CSPG4Q6UVK1 2322 aa15.42■□□□□ 0.06
SPG7-202ENST00000341316 CD5LO43866 347 aa15.42■□□□□ 0.06
SPG7-202ENST00000341316 MRPL51Q4U2R6 128 aaKnown RBP15.42■□□□□ 0.06
SPG7-202ENST00000341316 IL17RELQ6ZVW7 336 aa15.42■□□□□ 0.06
SPG7-202ENST00000341316 ORMDL3Q8N138 153 aa15.42■□□□□ 0.06
SPG7-202ENST00000341316 FAM208BQ5VWN6 2430 aa15.42■□□□□ 0.06
SPG7-202ENST00000341316 H3BUX3 64 aa15.41■□□□□ 0.06
SPG7-202ENST00000341316 BMI1P35226 326 aa15.41■□□□□ 0.06
SPG7-202ENST00000341316 ANKRD39Q53RE8 183 aa15.41■□□□□ 0.06
SPG7-202ENST00000341316 AMMECR1LQ6DCA0 310 aa15.41■□□□□ 0.06
SPG7-202ENST00000341316 USP9YO00507 2555 aaPredicted RBP15.41■□□□□ 0.06
SPG7-202ENST00000341316 FAM223BA6NKX1 122 aa15.41■□□□□ 0.06
SPG7-202ENST00000341316 IGLC6P0CF74 106 aa15.41■□□□□ 0.06
SPG7-202ENST00000341316 Q6ZS46 218 aa15.41■□□□□ 0.06
SPG7-202ENST00000341316 FAM223AQ8IWN6 122 aa15.41■□□□□ 0.06
SPG7-202ENST00000341316 SLC50A1Q9BRV3 221 aa15.41■□□□□ 0.06
SPG7-202ENST00000341316 FBN2P35556 2912 aa15.4■□□□□ 0.06
SPG7-202ENST00000341316 AVPP01185 164 aa15.4■□□□□ 0.06
SPG7-202ENST00000341316 PRB1P04280 392 aa15.4■□□□□ 0.06
SPG7-202ENST00000341316 MSMBP08118 114 aa15.4■□□□□ 0.06
SPG7-202ENST00000341316 C8orf86Q6ZUL3 223 aa15.4■□□□□ 0.06
SPG7-202ENST00000341316 FER1L6-AS1Q8NA97 138 aa15.4■□□□□ 0.06
SPG7-202ENST00000341316 AGPAT4-IT1Q9H0P7 198 aa15.4■□□□□ 0.06
SPG7-202ENST00000341316 SMKR1H3BMG3 65 aa15.4■□□□□ 0.06
SPG7-202ENST00000341316 ORM1P02763 201 aa15.4■□□□□ 0.06
SPG7-202ENST00000341316 IGF1P05019 195 aa15.4■□□□□ 0.06
SPG7-202ENST00000341316 UNQ9165/PRO28630Q6UXU0 137 aa15.4■□□□□ 0.06
SPG7-202ENST00000341316 LRRK2Q5S007 2527 aa15.39■□□□□ 0.06
SPG7-202ENST00000341316 A6NDX4 124 aa15.39■□□□□ 0.05
SPG7-202ENST00000341316 FGF6P10767 208 aa15.39■□□□□ 0.05
SPG7-202ENST00000341316 BLCAPP62952 87 aa15.39■□□□□ 0.05
SPG7-202ENST00000341316 ZANQ9Y493 2812 aa15.39■□□□□ 0.05
SPG7-202ENST00000341316 RBAKDNA6NC62 111 aa15.38■□□□□ 0.05
SPG7-202ENST00000341316 TMEM8BA6NDV4 472 aa15.38■□□□□ 0.05
SPG7-202ENST00000341316 PPIFP30405 207 aaKnown RBP15.38■□□□□ 0.05
SPG7-202ENST00000341316 ARL3P36405 182 aa15.38■□□□□ 0.05
SPG7-202ENST00000341316 CACNG7P62955 275 aa15.38■□□□□ 0.05
SPG7-202ENST00000341316 FABP5P3A8MUU1 101 aa15.38■□□□□ 0.05
SPG7-202ENST00000341316 CDKN1BP46527 198 aa15.38■□□□□ 0.05
SPG7-202ENST00000341316 TCTAP57738 103 aa15.38■□□□□ 0.05
SPG7-202ENST00000341316 RPS20P60866 119 aaKnown RBP15.38■□□□□ 0.05
SPG7-202ENST00000341316 KLK15Q9H2R5 256 aa15.38■□□□□ 0.05
SPG7-202ENST00000341316 MSRB1Q9NZV6 116 aa15.38■□□□□ 0.05
SPG7-202ENST00000341316 TRAV8-6A0A0B4J262 113 aa15.37■□□□□ 0.05
SPG7-202ENST00000341316 NPYP01303 97 aa15.37■□□□□ 0.05
SPG7-202ENST00000341316 IGHG2P01859 326 aa15.37■□□□□ 0.05
SPG7-202ENST00000341316 HBDP02042 147 aa15.37■□□□□ 0.05
SPG7-202ENST00000341316 TWIST1Q15672 202 aa15.37■□□□□ 0.05
SPG7-202ENST00000341316 LGALS9BQ3B8N2 356 aa15.37■□□□□ 0.05
SPG7-202ENST00000341316 TMEM97Q5BJF2 176 aa15.37■□□□□ 0.05
SPG7-202ENST00000341316 LGALS9CQ6DKI2 356 aa15.37■□□□□ 0.05
SPG7-202ENST00000341316 SMAD7O15105 426 aaKnown RBP15.37■□□□□ 0.05
SPG7-202ENST00000341316 CKS2P33552 79 aa15.37■□□□□ 0.05
SPG7-202ENST00000341316 DPF1Q92782 380 aa15.37■□□□□ 0.05
SPG7-202ENST00000341316 HIF1ANQ9NWT6 349 aa15.37■□□□□ 0.05
SPG7-202ENST00000341316 SRSF2Q01130 221 aaKnown RBP15.36■□□□□ 0.05
SPG7-202ENST00000341316 RNF151Q2KHN1 245 aa15.36■□□□□ 0.05
SPG7-202ENST00000341316 GLMPQ8WWB7 406 aa15.36■□□□□ 0.05
SPG7-202ENST00000341316 ATP6V0BQ99437 205 aa15.36■□□□□ 0.05
SPG7-202ENST00000341316 C11orf21Q9P2W6 132 aa15.36■□□□□ 0.05
SPG7-202ENST00000341316 IGHV3-11P01762 117 aa15.36■□□□□ 0.05
SPG7-202ENST00000341316 LCNL1Q6ZST4 164 aa15.36■□□□□ 0.05
SPG7-202ENST00000341316 C7orf71A4D174 169 aa15.35■□□□□ 0.05
SPG7-202ENST00000341316 Q6ZQT7 251 aa15.35■□□□□ 0.05
SPG7-202ENST00000341316 IGKV3D-20A0A0C4DH25 116 aa15.34■□□□□ 0.05
SPG7-202ENST00000341316 LINC01559Q495D7 138 aa15.34■□□□□ 0.05
SPG7-202ENST00000341316 OR1N2Q8NGR9 330 aa15.34■□□□□ 0.05
SPG7-202ENST00000341316 C20orf173Q96LM9 149 aa15.34■□□□□ 0.05
SPG7-202ENST00000341316 PEF1Q9UBV8 284 aaKnown RBP15.34■□□□□ 0.05
SPG7-202ENST00000341316 SEC11AP67812 179 aa15.34■□□□□ 0.05
SPG7-202ENST00000341316 IFI27L1Q96BM0 104 aa15.34■□□□□ 0.05
SPG7-202ENST00000341316 SPOCK3Q9BQ16 436 aa15.34■□□□□ 0.05
SPG7-202ENST00000341316 CST9LQ9H4G1 147 aa15.34■□□□□ 0.05
SPG7-202ENST00000341316 GPHB5Q86YW7 130 aa15.33■□□□□ 0.05
SPG7-202ENST00000341316 MRPL53Q96EL3 112 aaKnown RBP15.33■□□□□ 0.05
SPG7-202ENST00000341316 WFDC3Q8IUB2 231 aa15.33■□□□□ 0.04
SPG7-202ENST00000341316 BOD1L2Q8IYS8 172 aa15.33■□□□□ 0.04
SPG7-202ENST00000341316 CNFNQ9BYD5 112 aa15.33■□□□□ 0.04
SPG7-202ENST00000341316 C16orf92Q96LL3 132 aa15.32■□□□□ 0.04
SPG7-202ENST00000341316 B4DSR2 109 aa15.32■□□□□ 0.04
SPG7-202ENST00000341316 GAS8-AS1O95177 125 aa15.32■□□□□ 0.04
SPG7-202ENST00000341316 TMEM78Q5T7P6 136 aa15.32■□□□□ 0.04
SPG7-202ENST00000341316 RNF185Q96GF1 192 aa15.32■□□□□ 0.04
SPG7-202ENST00000341316 BBC3Q96PG8 261 aaPredicted RBP15.32■□□□□ 0.04
SPG7-202ENST00000341316 ANKRD17O75179 2603 aaKnown RBP15.31■□□□□ 0.04
SPG7-202ENST00000341316 NDUFA4O00483 81 aa15.31■□□□□ 0.04
SPG7-202ENST00000341316 PF4V1P10720 104 aa15.31■□□□□ 0.04
SPG7-202ENST00000341316 C9orf47Q6ZRZ4 202 aa15.31■□□□□ 0.04
SPG7-202ENST00000341316 USMG5Q96IX5 58 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms