RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 KIAA1644Q3SXP7 199 aa11.55□□□□□ -0.56
TUBB4B-201ENST00000340384 TCTEX1D4Q5JR98 221 aa11.55□□□□□ -0.56
TUBB4B-201ENST00000340384 C9orf47Q6ZRZ4 202 aa11.55□□□□□ -0.56
TUBB4B-201ENST00000340384 LCNL1Q6ZST4 164 aa11.55□□□□□ -0.56
TUBB4B-201ENST00000340384 Q8TAT8 98 aa11.55□□□□□ -0.56
TUBB4B-201ENST00000340384 GZMBP10144 247 aa11.54□□□□□ -0.56
TUBB4B-201ENST00000340384 KLF5Q13887 457 aaPredicted RBP11.54□□□□□ -0.56
TUBB4B-201ENST00000340384 ZNF738Q8NE65 137 aa11.54□□□□□ -0.56
TUBB4B-201ENST00000340384 RHPN1-AS1Q9BWJ2 59 aa11.54□□□□□ -0.56
TUBB4B-201ENST00000340384 SAMD10Q9BYL1 202 aa11.54□□□□□ -0.56
TUBB4B-201ENST00000340384 NRN1Q9NPD7 142 aa11.54□□□□□ -0.56
TUBB4B-201ENST00000340384 SMPXQ9UHP9 88 aa11.54□□□□□ -0.56
TUBB4B-201ENST00000340384 RNF114Q9Y508 228 aa11.54□□□□□ -0.56
TUBB4B-201ENST00000340384 PRAC2D3DTV9 90 aa11.53□□□□□ -0.56
TUBB4B-201ENST00000340384 LGALS1P09382 135 aaKnown RBP11.53□□□□□ -0.56
TUBB4B-201ENST00000340384 HIST1H1AQ02539 215 aaPredicted RBP11.53□□□□□ -0.56
TUBB4B-201ENST00000340384 GDF5OSQ5U4N7 250 aa11.53□□□□□ -0.56
TUBB4B-201ENST00000340384 KLHDC1Q8N7A1 406 aa11.53□□□□□ -0.56
TUBB4B-201ENST00000340384 GATD1Q8NB37 220 aa11.53□□□□□ -0.56
TUBB4B-201ENST00000340384 KCNS1Q96KK3 526 aa11.53□□□□□ -0.56
TUBB4B-201ENST00000340384 UBE2E2Q96LR5 201 aa11.53□□□□□ -0.56
TUBB4B-201ENST00000340384 TP53TG3Q9ULZ0 132 aa11.53□□□□□ -0.56
TUBB4B-201ENST00000340384 RPL11P62913 178 aaKnown RBP11.53□□□□□ -0.56
TUBB4B-201ENST00000340384 ERCC8Q13216 396 aa11.53□□□□□ -0.56
TUBB4B-201ENST00000340384 RNF152Q8N8N0 203 aa11.53□□□□□ -0.56
TUBB4B-201ENST00000340384 OR10J6PQ8NGY7 276 aa11.53□□□□□ -0.56
TUBB4B-201ENST00000340384 MYOZ3Q8TDC0 251 aa11.53□□□□□ -0.56
TUBB4B-201ENST00000340384 LINC00477Q96M19 166 aa11.53□□□□□ -0.56
TUBB4B-201ENST00000340384 AGPAT4-IT1Q9H0P7 198 aa11.53□□□□□ -0.56
TUBB4B-201ENST00000340384 RPLP1P05386 114 aaKnown RBP11.52□□□□□ -0.57
TUBB4B-201ENST00000340384 ID1P41134 155 aa11.52□□□□□ -0.57
TUBB4B-201ENST00000340384 REC114Q7Z4M0 266 aa11.52□□□□□ -0.57
TUBB4B-201ENST00000340384 ALKBH7Q9BT30 221 aaPredicted RBP11.52□□□□□ -0.57
TUBB4B-201ENST00000340384 SSBP4Q9BWG4 385 aaPredicted RBP11.52□□□□□ -0.57
TUBB4B-201ENST00000340384 A0A1B0GUS0 222 aa11.51□□□□□ -0.57
TUBB4B-201ENST00000340384 SOCS3O14543 225 aa11.51□□□□□ -0.57
TUBB4B-201ENST00000340384 IQCJQ1A5X6 159 aa11.51□□□□□ -0.57
TUBB4B-201ENST00000340384 LINC01559Q495D7 138 aa11.51□□□□□ -0.57
TUBB4B-201ENST00000340384 TM4SF20Q53R12 229 aa11.51□□□□□ -0.57
TUBB4B-201ENST00000340384 C18orf32Q8TCD1 76 aa11.51□□□□□ -0.57
TUBB4B-201ENST00000340384 COL6A5A8TX70 2615 aa11.51□□□□□ -0.57
TUBB4B-201ENST00000340384 LOC102724200A0A096LPH7 203 aaPredicted RBP11.5□□□□□ -0.57
TUBB4B-201ENST00000340384 LGALS9O00182 355 aa11.5□□□□□ -0.57
TUBB4B-201ENST00000340384 ORM1P02763 201 aa11.5□□□□□ -0.57
TUBB4B-201ENST00000340384 ARMS2P0C7Q2 107 aa11.5□□□□□ -0.57
TUBB4B-201ENST00000340384 PRB4P10163 310 aaPredicted RBP11.5□□□□□ -0.57
TUBB4B-201ENST00000340384 DMRTA1Q5VZB9 504 aa11.5□□□□□ -0.57
TUBB4B-201ENST00000340384 FER1L6-AS1Q8NA97 138 aa11.5□□□□□ -0.57
TUBB4B-201ENST00000340384 TPPP3Q9BW30 176 aa11.5□□□□□ -0.57
TUBB4B-201ENST00000340384 NUPR1O60356 82 aa11.49□□□□□ -0.57
TUBB4B-201ENST00000340384 CD28P10747 220 aa11.49□□□□□ -0.57
TUBB4B-201ENST00000340384 CTRLP40313 264 aa11.49□□□□□ -0.57
TUBB4B-201ENST00000340384 ZNF80P51504 273 aaPredicted RBP11.49□□□□□ -0.57
TUBB4B-201ENST00000340384 TMSB15BA0A087X1C1 80 aa11.49□□□□□ -0.57
TUBB4B-201ENST00000340384 TRBV7-9A0A0J9YWB2 115 aa11.49□□□□□ -0.57
TUBB4B-201ENST00000340384 F2Z2F3 143 aa11.49□□□□□ -0.57
TUBB4B-201ENST00000340384 LINC00310P59036 64 aa11.49□□□□□ -0.57
TUBB4B-201ENST00000340384 LYZL1Q6UWQ5 148 aa11.49□□□□□ -0.57
TUBB4B-201ENST00000340384 ZNF493Q6ZR52 646 aa11.49□□□□□ -0.57
TUBB4B-201ENST00000340384 C11orf44Q8N8P7 122 aa11.49□□□□□ -0.57
TUBB4B-201ENST00000340384 WFDC12Q8WWY7 111 aa11.49□□□□□ -0.57
TUBB4B-201ENST00000340384 GSN-AS1Q9NRJ2 163 aa11.49□□□□□ -0.57
TUBB4B-201ENST00000340384 M0QZ24 198 aa11.48□□□□□ -0.57
TUBB4B-201ENST00000340384 GPX1P07203 203 aa11.48□□□□□ -0.57
TUBB4B-201ENST00000340384 AMTP48728 403 aa11.48□□□□□ -0.57
TUBB4B-201ENST00000340384 C18orf65Q6ZTR6 163 aa11.48□□□□□ -0.57
TUBB4B-201ENST00000340384 ZNF324O75467 553 aaPredicted RBP11.47□□□□□ -0.57
TUBB4B-201ENST00000340384 HSBP1O75506 76 aa11.47□□□□□ -0.57
TUBB4B-201ENST00000340384 IGLC6P0CF74 106 aa11.47□□□□□ -0.57
TUBB4B-201ENST00000340384 C20orf173Q96LM9 149 aa11.47□□□□□ -0.57
TUBB4B-201ENST00000340384 MDFIQ99750 246 aa11.47□□□□□ -0.57
TUBB4B-201ENST00000340384 ADARB2-AS1A8MUL3 147 aa11.46□□□□□ -0.57
TUBB4B-201ENST00000340384 CHCHD1Q96BP2 118 aaKnown RBP11.46□□□□□ -0.57
TUBB4B-201ENST00000340384 CITED2Q99967 270 aaPredicted RBP11.46□□□□□ -0.57
TUBB4B-201ENST00000340384 STAB1Q9NY15 2570 aa11.46□□□□□ -0.58
TUBB4B-201ENST00000340384 TMEM213A2RRL7 107 aa11.46□□□□□ -0.58
TUBB4B-201ENST00000340384 SCGB1D1O95968 90 aa11.46□□□□□ -0.58
TUBB4B-201ENST00000340384 RAB4AP20338 218 aa11.46□□□□□ -0.58
TUBB4B-201ENST00000340384 TMEM158Q8WZ71 300 aa11.46□□□□□ -0.58
TUBB4B-201ENST00000340384 RCHY1Q96PM5 261 aa11.46□□□□□ -0.58
TUBB4B-201ENST00000340384 IGHV4OR15-8A0A075B7B6 117 aa11.45□□□□□ -0.58
TUBB4B-201ENST00000340384 A0A087WW49 117 aa11.45□□□□□ -0.58
TUBB4B-201ENST00000340384 TSTD3H0UI37 97 aa11.45□□□□□ -0.58
TUBB4B-201ENST00000340384 PMCHP20382 165 aa11.45□□□□□ -0.58
TUBB4B-201ENST00000340384 OR8A1Q8NGG7 326 aa11.45□□□□□ -0.58
TUBB4B-201ENST00000340384 CNFNQ9BYD5 112 aa11.45□□□□□ -0.58
TUBB4B-201ENST00000340384 NAGKQ9UJ70 344 aa11.45□□□□□ -0.58
TUBB4B-201ENST00000340384 TRAV21A0A0B4J279 112 aa11.44□□□□□ -0.58
TUBB4B-201ENST00000340384 HOXD3P31249 432 aaPredicted RBP11.44□□□□□ -0.58
TUBB4B-201ENST00000340384 PKIAP61925 76 aa11.44□□□□□ -0.58
TUBB4B-201ENST00000340384 TWIST1Q15672 202 aa11.44□□□□□ -0.58
TUBB4B-201ENST00000340384 RNASEKQ6P5S7 137 aaKnown RBP11.44□□□□□ -0.58
TUBB4B-201ENST00000340384 IGKV3-7A0A075B6H7 116 aa11.43□□□□□ -0.58
TUBB4B-201ENST00000340384 SYNJ2BPP57105 145 aa11.43□□□□□ -0.58
TUBB4B-201ENST00000340384 SNRPD3P62318 126 aaKnown RBP11.43□□□□□ -0.58
TUBB4B-201ENST00000340384 NIT1Q86X76 327 aa11.43□□□□□ -0.58
TUBB4B-201ENST00000340384 C4orf3Q8WVX3 66 aa11.43□□□□□ -0.58
TUBB4B-201ENST00000340384 CITED1Q99966 193 aa11.43□□□□□ -0.58
TUBB4B-201ENST00000340384 CACNG7P62955 275 aa11.42□□□□□ -0.58
TUBB4B-201ENST00000340384 FAM104BQ5XKR9 115 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms