RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 C11orf52Q96A22 123 aa11.13□□□□□ -0.63
SEC13-201ENST00000337354 TVP23CQ96ET8 276 aa11.13□□□□□ -0.63
SEC13-201ENST00000337354 TRAV34A0A0B4J273 112 aa11.12□□□□□ -0.63
SEC13-201ENST00000337354 LOC102723971A0A1B0GUV8 181 aa11.12□□□□□ -0.63
SEC13-201ENST00000337354 RBMY1A1P0DJD3 496 aaKnown RBP11.12□□□□□ -0.63
SEC13-201ENST00000337354 RBMY1CP0DJD4 496 aa11.12□□□□□ -0.63
SEC13-201ENST00000337354 AKR1C3P42330 323 aa11.12□□□□□ -0.63
SEC13-201ENST00000337354 RBMY1FQ15415 496 aaKnown RBP11.12□□□□□ -0.63
SEC13-201ENST00000337354 RRN3P1Q2M238 152 aa11.12□□□□□ -0.63
SEC13-201ENST00000337354 C2CD4CQ8TF44 421 aa11.12□□□□□ -0.63
SEC13-201ENST00000337354 WWC2-AS2Q96NR7 200 aa11.12□□□□□ -0.63
SEC13-201ENST00000337354 PYGO2Q9BRQ0 406 aa11.12□□□□□ -0.63
SEC13-201ENST00000337354 AGRNO00468 2067 aa11.11□□□□□ -0.63
SEC13-201ENST00000337354 SCO2A0A1W2PP80 73 aa11.11□□□□□ -0.63
SEC13-201ENST00000337354 TMEM189A5PLL7 270 aa11.11□□□□□ -0.63
SEC13-201ENST00000337354 NDUFS6O75380 124 aaKnown RBP11.11□□□□□ -0.63
SEC13-201ENST00000337354 BTN1A1Q13410 526 aa11.11□□□□□ -0.63
SEC13-201ENST00000337354 Q6AWC8 147 aa11.11□□□□□ -0.63
SEC13-201ENST00000337354 Q8NAQ8 132 aa11.11□□□□□ -0.63
SEC13-201ENST00000337354 FAM210AQ96ND0 272 aa11.11□□□□□ -0.63
SEC13-201ENST00000337354 LINC00467Q9BRT7 94 aa11.11□□□□□ -0.63
SEC13-201ENST00000337354 C11orf68Q9H3H3 251 aaKnown RBP11.11□□□□□ -0.63
SEC13-201ENST00000337354 TRAV21A0A0B4J279 112 aa11.1□□□□□ -0.63
SEC13-201ENST00000337354 SMUG1Q53HV7 270 aa11.1□□□□□ -0.63
SEC13-201ENST00000337354 ZNF506Q5JVG8 444 aa11.1□□□□□ -0.63
SEC13-201ENST00000337354 COX8CQ7Z4L0 72 aa11.1□□□□□ -0.63
SEC13-201ENST00000337354 EIF5A2Q9GZV4 153 aaKnown RBP11.1□□□□□ -0.63
SEC13-201ENST00000337354 EDA2RQ9HAV5 297 aa11.1□□□□□ -0.63
SEC13-201ENST00000337354 IGHV4-28A0A0C4DH34 117 aa11.09□□□□□ -0.63
SEC13-201ENST00000337354 LTAP01374 205 aa11.09□□□□□ -0.63
SEC13-201ENST00000337354 PRR9Q5T870 116 aa11.09□□□□□ -0.63
SEC13-201ENST00000337354 ZNF493Q6ZR52 646 aa11.09□□□□□ -0.63
SEC13-201ENST00000337354 Q86TA4 180 aa11.09□□□□□ -0.63
SEC13-201ENST00000337354 MED9Q9NWA0 146 aa11.09□□□□□ -0.63
SEC13-201ENST00000337354 A0A0J9YWU9 116 aa11.08□□□□□ -0.64
SEC13-201ENST00000337354 TMEM250H0YL14 139 aa11.08□□□□□ -0.64
SEC13-201ENST00000337354 RPL35P42766 123 aaKnown RBP11.08□□□□□ -0.64
SEC13-201ENST00000337354 BAGE2Q86Y30 109 aa11.08□□□□□ -0.64
SEC13-201ENST00000337354 TMEM183AQ8IXX5 376 aa11.08□□□□□ -0.64
SEC13-201ENST00000337354 ZNF705GA8MUZ8 300 aaPredicted RBP11.07□□□□□ -0.64
SEC13-201ENST00000337354 RGS13O14921 159 aa11.07□□□□□ -0.64
SEC13-201ENST00000337354 GCGP01275 180 aa11.07□□□□□ -0.64
SEC13-201ENST00000337354 PFN1P07737 140 aaKnown RBP11.07□□□□□ -0.64
SEC13-201ENST00000337354 HTN1P15515 57 aa11.07□□□□□ -0.64
SEC13-201ENST00000337354 IFITM2Q01629 132 aa11.07□□□□□ -0.64
SEC13-201ENST00000337354 ANXA2RQ3ZCQ2 193 aa11.07□□□□□ -0.64
SEC13-201ENST00000337354 TOR2AQ5JU69 321 aa11.07□□□□□ -0.64
SEC13-201ENST00000337354 EIF4E3Q8N5X7 224 aaKnown RBP11.07□□□□□ -0.64
SEC13-201ENST00000337354 PCNPQ8WW12 178 aaKnown RBP11.07□□□□□ -0.64
SEC13-201ENST00000337354 C8orf49Q96NF6 230 aa11.07□□□□□ -0.64
SEC13-201ENST00000337354 SMDT1Q9H4I9 107 aa11.07□□□□□ -0.64
SEC13-201ENST00000337354 IGHV1OR15-1A0A075B7D0 117 aa11.06□□□□□ -0.64
SEC13-201ENST00000337354 FABP5P3A8MUU1 101 aa11.06□□□□□ -0.64
SEC13-201ENST00000337354 TDRG1Q3Y452 100 aa11.06□□□□□ -0.64
SEC13-201ENST00000337354 CLLU1Q5K131 121 aa11.06□□□□□ -0.64
SEC13-201ENST00000337354 FAM159AQ6UWV7 190 aa11.06□□□□□ -0.64
SEC13-201ENST00000337354 IL17DQ8TAD2 202 aa11.06□□□□□ -0.64
SEC13-201ENST00000337354 TMEM263Q8WUH6 116 aaKnown RBP11.06□□□□□ -0.64
SEC13-201ENST00000337354 SMIM12Q96EX1 92 aa11.06□□□□□ -0.64
SEC13-201ENST00000337354 C16orf74Q96GX8 76 aa11.06□□□□□ -0.64
SEC13-201ENST00000337354 MLST8Q9BVC4 326 aa11.06□□□□□ -0.64
SEC13-201ENST00000337354 TENM3Q9P273 2699 aa11.05□□□□□ -0.64
SEC13-201ENST00000337354 TEX48A0A1B0GUV7 120 aa11.05□□□□□ -0.64
SEC13-201ENST00000337354 AZU1P20160 251 aa11.05□□□□□ -0.64
SEC13-201ENST00000337354 PEA15Q15121 130 aa11.05□□□□□ -0.64
SEC13-201ENST00000337354 KCNS1Q96KK3 526 aa11.05□□□□□ -0.64
SEC13-201ENST00000337354 CBY3A6NI87 242 aa11.04□□□□□ -0.64
SEC13-201ENST00000337354 DEFB4AO15263 64 aa11.04□□□□□ -0.64
SEC13-201ENST00000337354 ZNF80P51504 273 aaPredicted RBP11.04□□□□□ -0.64
SEC13-201ENST00000337354 RNASE8Q8TDE3 154 aaKnown RBP11.04□□□□□ -0.64
SEC13-201ENST00000337354 DERL1Q9BUN8 251 aa11.04□□□□□ -0.64
SEC13-201ENST00000337354 STAB2Q8WWQ8 2551 aa11.04□□□□□ -0.64
SEC13-201ENST00000337354 HUWE1Q7Z6Z7 4374 aaKnown RBP11.04□□□□□ -0.64
SEC13-201ENST00000337354 PRM2P04554 102 aa11.03□□□□□ -0.64
SEC13-201ENST00000337354 SPART-AS1P0CW21 52 aa11.03□□□□□ -0.64
SEC13-201ENST00000337354 GNG4P50150 75 aa11.03□□□□□ -0.64
SEC13-201ENST00000337354 IBA57Q5T440 356 aaKnown RBP11.03□□□□□ -0.64
SEC13-201ENST00000337354 FAM162BQ5T6X4 162 aa11.03□□□□□ -0.64
SEC13-201ENST00000337354 Q6ZQT7 251 aa11.03□□□□□ -0.64
SEC13-201ENST00000337354 C11orf45Q8TAV5 145 aa11.03□□□□□ -0.64
SEC13-201ENST00000337354 ZC2HC1AQ96GY0 325 aa11.03□□□□□ -0.64
SEC13-201ENST00000337354 TIMM8BQ9Y5J9 83 aaPredicted RBP11.03□□□□□ -0.64
SEC13-201ENST00000337354 CXorf65A6NEN9 183 aa11.03□□□□□ -0.64
SEC13-201ENST00000337354 CRIP1P50238 77 aa11.03□□□□□ -0.64
SEC13-201ENST00000337354 EMP1P54849 157 aa11.03□□□□□ -0.64
SEC13-201ENST00000337354 ZNF674Q2M3X9 581 aa11.03□□□□□ -0.64
SEC13-201ENST00000337354 CENPWQ5EE01 88 aa11.03□□□□□ -0.64
SEC13-201ENST00000337354 MUC21Q5SSG8 566 aa11.03□□□□□ -0.64
SEC13-201ENST00000337354 NBEAL2Q6ZNJ1 2754 aa11.02□□□□□ -0.65
SEC13-201ENST00000337354 TRGV11A0A075B6L2 103 aa11.02□□□□□ -0.65
SEC13-201ENST00000337354 PLAC8L1A1L4L8 177 aa11.02□□□□□ -0.65
SEC13-201ENST00000337354 RAB19A4D1S5 217 aa11.02□□□□□ -0.65
SEC13-201ENST00000337354 LYRM9A8MSI8 78 aa11.02□□□□□ -0.65
SEC13-201ENST00000337354 SNURFLB1AK76 121 aa11.02□□□□□ -0.65
SEC13-201ENST00000337354 C9JCJ5 164 aa11.02□□□□□ -0.65
SEC13-201ENST00000337354 SRP19P09132 144 aaKnown RBP11.02□□□□□ -0.65
SEC13-201ENST00000337354 PARLQ9H300 379 aa11.02□□□□□ -0.65
SEC13-201ENST00000337354 SDF2L1Q9HCN8 221 aa11.02□□□□□ -0.65
SEC13-201ENST00000337354 BIN3Q9NQY0 253 aa11.02□□□□□ -0.65
SEC13-201ENST00000337354 DKK2Q9UBU2 259 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms