RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 DUX4L9Q6RFH8 374 aaPredicted RBP7.8□□□□□ -1.16
COL4A6-201ENST00000334504 CLPSL2Q6UWE3 100 aa7.8□□□□□ -1.16
COL4A6-201ENST00000334504 LYPD6BQ8NI32 183 aa7.8□□□□□ -1.16
COL4A6-201ENST00000334504 RNF183Q96D59 192 aa7.8□□□□□ -1.16
COL4A6-201ENST00000334504 RTTNQ86VV8 2226 aa7.8□□□□□ -1.16
COL4A6-201ENST00000334504 NRXN2Q9P2S2 1712 aa7.8□□□□□ -1.16
COL4A6-201ENST00000334504 IGHV4-4A0A075B6R2 117 aa7.8□□□□□ -1.16
COL4A6-201ENST00000334504 LINC01620Q4KN68 170 aa7.8□□□□□ -1.16
COL4A6-201ENST00000334504 VOPP1Q96AW1 172 aa7.8□□□□□ -1.16
COL4A6-201ENST00000334504 ZNF883P0CG24 379 aa7.8□□□□□ -1.16
COL4A6-201ENST00000334504 ZDBF2Q9HCK1 2354 aa7.8□□□□□ -1.16
COL4A6-201ENST00000334504 J3QKU1 62 aa7.79□□□□□ -1.16
COL4A6-201ENST00000334504 DYNAPQ8N1N2 210 aa7.79□□□□□ -1.16
COL4A6-201ENST00000334504 Q0VFX4 171 aa7.79□□□□□ -1.16
COL4A6-201ENST00000334504 FHL1Q13642 323 aa7.79□□□□□ -1.16
COL4A6-201ENST00000334504 F5H768 121 aa7.79□□□□□ -1.16
COL4A6-201ENST00000334504 COL8A2P25067 703 aa7.79□□□□□ -1.16
COL4A6-201ENST00000334504 GATA1P15976 413 aaPredicted RBP7.79□□□□□ -1.16
COL4A6-201ENST00000334504 ARID2Q68CP9 1835 aa7.79□□□□□ -1.16
COL4A6-201ENST00000334504 FOXL2NBQ6ZUU3 175 aa7.79□□□□□ -1.16
COL4A6-201ENST00000334504 VWCEQ96DN2 955 aa7.79□□□□□ -1.16
COL4A6-201ENST00000334504 ZNF833PQ6ZTB9 187 aa7.78□□□□□ -1.16
COL4A6-201ENST00000334504 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.78□□□□□ -1.16
COL4A6-201ENST00000334504 IGKV2-29A2NJV5 120 aaPredicted RBP7.78□□□□□ -1.16
COL4A6-201ENST00000334504 A4D1N5 150 aa7.78□□□□□ -1.16
COL4A6-201ENST00000334504 ZNF134P52741 427 aa7.78□□□□□ -1.16
COL4A6-201ENST00000334504 LINC01545Q5VT33 79 aa7.78□□□□□ -1.16
COL4A6-201ENST00000334504 CACNA1DQ01668 2161 aa7.78□□□□□ -1.16
COL4A6-201ENST00000334504 CRYGBP07316 175 aa7.78□□□□□ -1.16
COL4A6-201ENST00000334504 LRRC37AA6NMS7 1700 aa7.78□□□□□ -1.16
COL4A6-201ENST00000334504 LRRK1Q38SD2 2015 aa7.78□□□□□ -1.16
COL4A6-201ENST00000334504 CSRP1P21291 193 aaKnown RBP7.78□□□□□ -1.16
COL4A6-201ENST00000334504 AHCTF1Q8WYP5 2266 aa7.78□□□□□ -1.16
COL4A6-201ENST00000334504 DOCK3Q8IZD9 2030 aa7.78□□□□□ -1.16
COL4A6-201ENST00000334504 WDR86Q86TI4 376 aa7.78□□□□□ -1.16
COL4A6-201ENST00000334504 IGLV3-19P01714 112 aa7.78□□□□□ -1.16
COL4A6-201ENST00000334504 SAA4P35542 130 aa7.78□□□□□ -1.16
COL4A6-201ENST00000334504 C17orf77Q96MU5 243 aa7.78□□□□□ -1.16
COL4A6-201ENST00000334504 A0A096LPF7 62 aa7.77□□□□□ -1.17
COL4A6-201ENST00000334504 K7EM74 188 aa7.77□□□□□ -1.17
COL4A6-201ENST00000334504 ZFP2Q6ZN57 461 aa7.77□□□□□ -1.17
COL4A6-201ENST00000334504 RNF166Q96A37 237 aaPredicted RBP7.77□□□□□ -1.17
COL4A6-201ENST00000334504 COX7B2Q8TF08 81 aa7.77□□□□□ -1.17
COL4A6-201ENST00000334504 KIF26BQ2KJY2 2108 aa7.77□□□□□ -1.17
COL4A6-201ENST00000334504 TCF20Q9UGU0 1960 aaKnown RBP7.77□□□□□ -1.17
COL4A6-201ENST00000334504 MP68P56378 58 aa7.77□□□□□ -1.17
COL4A6-201ENST00000334504 SLC25A29Q8N8R3 303 aa7.77□□□□□ -1.17
COL4A6-201ENST00000334504 RUSC1-AS1Q66K80 236 aa7.77□□□□□ -1.17
COL4A6-201ENST00000334504 C14orf132Q9NPU4 83 aa7.77□□□□□ -1.17
COL4A6-201ENST00000334504 TPSG1Q9NRR2 321 aa7.77□□□□□ -1.17
COL4A6-201ENST00000334504 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.76□□□□□ -1.17
COL4A6-201ENST00000334504 GNRH2O43555 120 aa7.76□□□□□ -1.17
COL4A6-201ENST00000334504 LY6HO94772 140 aa7.76□□□□□ -1.17
COL4A6-201ENST00000334504 RHOHQ15669 191 aa7.76□□□□□ -1.17
COL4A6-201ENST00000334504 ARTNQ5T4W7 220 aa7.76□□□□□ -1.17
COL4A6-201ENST00000334504 SPTSSBQ8NFR3 76 aa7.76□□□□□ -1.17
COL4A6-201ENST00000334504 ZMAT4Q9H898 229 aa7.76□□□□□ -1.17
COL4A6-201ENST00000334504 G3V318 75 aa7.76□□□□□ -1.17
COL4A6-201ENST00000334504 ATP6V0E2Q8NHE4 81 aa7.76□□□□□ -1.17
COL4A6-201ENST00000334504 XCL1P47992 114 aa7.76□□□□□ -1.17
COL4A6-201ENST00000334504 WT1-ASQ06250 92 aa7.76□□□□□ -1.17
COL4A6-201ENST00000334504 MRPL55Q7Z7F7 128 aaKnown RBP7.76□□□□□ -1.17
COL4A6-201ENST00000334504 C1orf147Q96MC9 270 aaPredicted RBP7.76□□□□□ -1.17
COL4A6-201ENST00000334504 A0A0G2JMZ2 1700 aa7.76□□□□□ -1.17
COL4A6-201ENST00000334504 LRRC37A2A6NM11 1700 aa7.76□□□□□ -1.17
COL4A6-201ENST00000334504 INTS1Q8N201 2190 aaKnown RBP7.76□□□□□ -1.17
COL4A6-201ENST00000334504 TTTY13Q9BZ97 58 aa7.76□□□□□ -1.17
COL4A6-201ENST00000334504 FREM3P0C091 2139 aa7.76□□□□□ -1.17
COL4A6-201ENST00000334504 TRAV4A0A0B4J268 109 aa7.75□□□□□ -1.17
COL4A6-201ENST00000334504 A0A0U1RQV1 116 aa7.75□□□□□ -1.17
COL4A6-201ENST00000334504 B3GALT5-AS1P59052 145 aa7.75□□□□□ -1.17
COL4A6-201ENST00000334504 C17orf58Q2M2W7 97 aa7.75□□□□□ -1.17
COL4A6-201ENST00000334504 CLEC2BQ92478 149 aa7.75□□□□□ -1.17
COL4A6-201ENST00000334504 TRBV10-2A0A0K0K1G8 114 aa7.75□□□□□ -1.17
COL4A6-201ENST00000334504 SPRY2O43597 315 aa7.75□□□□□ -1.17
COL4A6-201ENST00000334504 ANGP03950 147 aaKnown RBP7.75□□□□□ -1.17
COL4A6-201ENST00000334504 FUSP35637 526 aaKnown RBP eCLIP7.75□□□□□ -1.17
COL4A6-201ENST00000334504 DOCK11Q5JSL3 2073 aa7.75□□□□□ -1.17
COL4A6-201ENST00000334504 MBD3L4A6NDZ8 208 aaPredicted RBP7.75□□□□□ -1.17
COL4A6-201ENST00000334504 MBD3L3A6NE82 208 aaPredicted RBP7.75□□□□□ -1.17
COL4A6-201ENST00000334504 MBD3L5A6NJ08 208 aaPredicted RBP7.75□□□□□ -1.17
COL4A6-201ENST00000334504 MBD3L2Q8NHZ7 208 aaPredicted RBP7.75□□□□□ -1.17
COL4A6-201ENST00000334504 PTH2Q96A98 100 aa7.75□□□□□ -1.17
COL4A6-201ENST00000334504 SPATA25Q9BR10 227 aa7.75□□□□□ -1.17
COL4A6-201ENST00000334504 BRCA1P38398 1863 aaKnown RBP7.75□□□□□ -1.17
COL4A6-201ENST00000334504 MYOFQ9NZM1 2061 aa7.75□□□□□ -1.17
COL4A6-201ENST00000334504 SRSF2Q01130 221 aaKnown RBP7.75□□□□□ -1.17
COL4A6-201ENST00000334504 FOXE3Q13461 319 aa7.75□□□□□ -1.17
COL4A6-201ENST00000334504 RPL39LQ96EH5 51 aaKnown RBP7.75□□□□□ -1.17
COL4A6-201ENST00000334504 E9PQ18 207 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 PRR20EP86478 221 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 PRR20CP86479 221 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 PRR20DP86480 221 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 PRR20BP86481 221 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 PRR20AP86496 221 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 MPLKIPQ8TAP9 179 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 V9GYY9 64 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 DOCK9Q9BZ29 2069 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 ABCA7Q8IZY2 2146 aa7.74□□□□□ -1.17
COL4A6-201ENST00000334504 RBAKDNA6NC62 111 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms