RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 IGHV3OR16-12A0A075B7B8 117 aa11.58□□□□□ -0.56
LRRC28-202ENST00000331450 SMIM9A6NGZ8 99 aa11.58□□□□□ -0.56
LRRC28-202ENST00000331450 TMEM183BQ1AE95 376 aa11.58□□□□□ -0.56
LRRC28-202ENST00000331450 ZNF506Q5JVG8 444 aa11.58□□□□□ -0.56
LRRC28-202ENST00000331450 Q6AWC8 147 aa11.58□□□□□ -0.56
LRRC28-202ENST00000331450 PRNTQ86SH4 94 aa11.58□□□□□ -0.56
LRRC28-202ENST00000331450 NDFIP1Q9BT67 221 aa11.58□□□□□ -0.56
LRRC28-202ENST00000331450 C11orf68Q9H3H3 251 aaKnown RBP11.58□□□□□ -0.56
LRRC28-202ENST00000331450 EDA2RQ9HAV5 297 aa11.58□□□□□ -0.56
LRRC28-202ENST00000331450 TREM1Q9NP99 234 aa11.58□□□□□ -0.56
LRRC28-202ENST00000331450 IGHV4-28A0A0C4DH34 117 aa11.57□□□□□ -0.56
LRRC28-202ENST00000331450 RBFOX3A6NFN3 312 aa11.57□□□□□ -0.56
LRRC28-202ENST00000331450 H7BYZ3 331 aa11.57□□□□□ -0.56
LRRC28-202ENST00000331450 PDE6DO43924 150 aa11.57□□□□□ -0.56
LRRC28-202ENST00000331450 RNASE4P34096 147 aaKnown RBP11.57□□□□□ -0.56
LRRC28-202ENST00000331450 Q6ZQT7 251 aa11.57□□□□□ -0.56
LRRC28-202ENST00000331450 ZNF767PQ75MW2 155 aa11.57□□□□□ -0.56
LRRC28-202ENST00000331450 FAM210AQ96ND0 272 aa11.57□□□□□ -0.56
LRRC28-202ENST00000331450 C8orf49Q96NF6 230 aa11.57□□□□□ -0.56
LRRC28-202ENST00000331450 TMEM208Q9BTX3 173 aa11.57□□□□□ -0.56
LRRC28-202ENST00000331450 LTAP01374 205 aa11.56□□□□□ -0.56
LRRC28-202ENST00000331450 S100A9P06702 114 aaKnown RBP11.56□□□□□ -0.56
LRRC28-202ENST00000331450 UBE2G1P62253 170 aa11.56□□□□□ -0.56
LRRC28-202ENST00000331450 SAPCD1Q5SSQ6 148 aa11.56□□□□□ -0.56
LRRC28-202ENST00000331450 COX8CQ7Z4L0 72 aa11.56□□□□□ -0.56
LRRC28-202ENST00000331450 LINC00467Q9BRT7 94 aa11.56□□□□□ -0.56
LRRC28-202ENST00000331450 NIPSNAP3BQ9BS92 247 aa11.56□□□□□ -0.56
LRRC28-202ENST00000331450 DERL1Q9BUN8 251 aa11.56□□□□□ -0.56
LRRC28-202ENST00000331450 A0A0J9YWU9 116 aa11.55□□□□□ -0.56
LRRC28-202ENST00000331450 NDUFS6O75380 124 aaKnown RBP11.55□□□□□ -0.56
LRRC28-202ENST00000331450 TAS2R60P59551 318 aa11.55□□□□□ -0.56
LRRC28-202ENST00000331450 TOR2AQ5JU69 321 aa11.55□□□□□ -0.56
LRRC28-202ENST00000331450 LINC01587Q99440 93 aa11.55□□□□□ -0.56
LRRC28-202ENST00000331450 PYGO2Q9BRQ0 406 aa11.55□□□□□ -0.56
LRRC28-202ENST00000331450 ZFP30Q9Y2G7 519 aa11.55□□□□□ -0.56
LRRC28-202ENST00000331450 ZNF705GA8MUZ8 300 aaPredicted RBP11.54□□□□□ -0.56
LRRC28-202ENST00000331450 PRM2P04554 102 aa11.54□□□□□ -0.56
LRRC28-202ENST00000331450 RPL35P42766 123 aaKnown RBP11.54□□□□□ -0.56
LRRC28-202ENST00000331450 ZNF80P51504 273 aaPredicted RBP11.54□□□□□ -0.56
LRRC28-202ENST00000331450 RRN3P1Q2M238 152 aa11.54□□□□□ -0.56
LRRC28-202ENST00000331450 SMUG1Q53HV7 270 aa11.54□□□□□ -0.56
LRRC28-202ENST00000331450 STAB2Q8WWQ8 2551 aa11.54□□□□□ -0.56
LRRC28-202ENST00000331450 PLAC8L1A1L4L8 177 aa11.53□□□□□ -0.56
LRRC28-202ENST00000331450 TMEM250H0YL14 139 aa11.53□□□□□ -0.56
LRRC28-202ENST00000331450 DEFB4AO15263 64 aa11.53□□□□□ -0.56
LRRC28-202ENST00000331450 GCGP01275 180 aa11.53□□□□□ -0.56
LRRC28-202ENST00000331450 CLLU1Q5K131 121 aa11.53□□□□□ -0.56
LRRC28-202ENST00000331450 RNASE8Q8TDE3 154 aaKnown RBP11.53□□□□□ -0.56
LRRC28-202ENST00000331450 MLST8Q9BVC4 326 aa11.53□□□□□ -0.56
LRRC28-202ENST00000331450 TRBV20OR9-2A0A075B6H5 130 aa11.52□□□□□ -0.57
LRRC28-202ENST00000331450 TRAV21A0A0B4J279 112 aa11.52□□□□□ -0.57
LRRC28-202ENST00000331450 AZU1P20160 251 aa11.52□□□□□ -0.57
LRRC28-202ENST00000331450 TMEM183AQ8IXX5 376 aa11.52□□□□□ -0.57
LRRC28-202ENST00000331450 ZC2HC1AQ96GY0 325 aa11.52□□□□□ -0.57
LRRC28-202ENST00000331450 EIF5A2Q9GZV4 153 aaKnown RBP11.52□□□□□ -0.57
LRRC28-202ENST00000331450 MED9Q9NWA0 146 aa11.52□□□□□ -0.57
LRRC28-202ENST00000331450 IGHV1OR15-1A0A075B7D0 117 aa11.51□□□□□ -0.57
LRRC28-202ENST00000331450 TMEM189A5PLL7 270 aa11.51□□□□□ -0.57
LRRC28-202ENST00000331450 PFN1P07737 140 aaKnown RBP11.51□□□□□ -0.57
LRRC28-202ENST00000331450 RAB14P61106 215 aa11.51□□□□□ -0.57
LRRC28-202ENST00000331450 TDRG1Q3Y452 100 aa11.51□□□□□ -0.57
LRRC28-202ENST00000331450 ANXA2RQ3ZCQ2 193 aa11.51□□□□□ -0.57
LRRC28-202ENST00000331450 EIF4E3Q8N5X7 224 aaKnown RBP11.51□□□□□ -0.57
LRRC28-202ENST00000331450 TMEM263Q8WUH6 116 aaKnown RBP11.51□□□□□ -0.57
LRRC28-202ENST00000331450 C16orf74Q96GX8 76 aa11.51□□□□□ -0.57
LRRC28-202ENST00000331450 RGS13O14921 159 aa11.5□□□□□ -0.57
LRRC28-202ENST00000331450 CRIP1P50238 77 aa11.5□□□□□ -0.57
LRRC28-202ENST00000331450 CENPWQ5EE01 88 aa11.5□□□□□ -0.57
LRRC28-202ENST00000331450 ZNF493Q6ZR52 646 aa11.5□□□□□ -0.57
LRRC28-202ENST00000331450 NHLRC2Q8NBF2 726 aa11.5□□□□□ -0.57
LRRC28-202ENST00000331450 C11orf21Q9P2W6 132 aa11.5□□□□□ -0.57
LRRC28-202ENST00000331450 RAB19A4D1S5 217 aa11.49□□□□□ -0.57
LRRC28-202ENST00000331450 IGLV2-8P01709 118 aa11.49□□□□□ -0.57
LRRC28-202ENST00000331450 SRP19P09132 144 aaKnown RBP11.49□□□□□ -0.57
LRRC28-202ENST00000331450 HTN1P15515 57 aa11.49□□□□□ -0.57
LRRC28-202ENST00000331450 ZNF674Q2M3X9 581 aa11.49□□□□□ -0.57
LRRC28-202ENST00000331450 MUC21Q5SSG8 566 aa11.49□□□□□ -0.57
LRRC28-202ENST00000331450 BAGE2Q86Y30 109 aa11.49□□□□□ -0.57
LRRC28-202ENST00000331450 C11orf72Q8NBR9 251 aa11.49□□□□□ -0.57
LRRC28-202ENST00000331450 IL17DQ8TAD2 202 aa11.49□□□□□ -0.57
LRRC28-202ENST00000331450 SMIM12Q96EX1 92 aa11.49□□□□□ -0.57
LRRC28-202ENST00000331450 WWC2-AS2Q96NR7 200 aa11.49□□□□□ -0.57
LRRC28-202ENST00000331450 PARLQ9H300 379 aa11.49□□□□□ -0.57
LRRC28-202ENST00000331450 CELA1Q9UNI1 258 aa11.49□□□□□ -0.57
LRRC28-202ENST00000331450 SRSF3P84103 164 aaKnown RBP11.48□□□□□ -0.57
LRRC28-202ENST00000331450 IBA57Q5T440 356 aaKnown RBP11.48□□□□□ -0.57
LRRC28-202ENST00000331450 FAM159AQ6UWV7 190 aa11.48□□□□□ -0.57
LRRC28-202ENST00000331450 TP53TG3Q9ULZ0 132 aa11.48□□□□□ -0.57
LRRC28-202ENST00000331450 CBY3A6NI87 242 aa11.47□□□□□ -0.57
LRRC28-202ENST00000331450 FABP5P3A8MUU1 101 aa11.47□□□□□ -0.57
LRRC28-202ENST00000331450 C9JCJ5 164 aa11.47□□□□□ -0.57
LRRC28-202ENST00000331450 C9JQL5 133 aa11.47□□□□□ -0.57
LRRC28-202ENST00000331450 SH2D1AO60880 128 aa11.47□□□□□ -0.57
LRRC28-202ENST00000331450 GNG4P50150 75 aa11.47□□□□□ -0.57
LRRC28-202ENST00000331450 SMDT1Q9H4I9 107 aa11.47□□□□□ -0.57
LRRC28-202ENST00000331450 DKK2Q9UBU2 259 aa11.47□□□□□ -0.57
LRRC28-202ENST00000331450 NAGKQ9UJ70 344 aa11.47□□□□□ -0.57
LRRC28-202ENST00000331450 EMP1P54849 157 aa11.46□□□□□ -0.57
LRRC28-202ENST00000331450 FAM162BQ5T6X4 162 aa11.46□□□□□ -0.57
LRRC28-202ENST00000331450 FAM222AQ5U5X8 452 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms