RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 ATRQ13535 2644 aa7.24□□□□□ -1.25
C11orf54-201ENST00000331239 HIGD1CA8MV81 97 aa7.24□□□□□ -1.25
C11orf54-201ENST00000331239 M0R143 59 aa7.24□□□□□ -1.25
C11orf54-201ENST00000331239 IGHV3-23P01764 117 aa7.24□□□□□ -1.25
C11orf54-201ENST00000331239 RPL7P18124 248 aaKnown RBP7.24□□□□□ -1.25
C11orf54-201ENST00000331239 KRTAP10-3P60369 221 aa7.24□□□□□ -1.25
C11orf54-201ENST00000331239 LYZP61626 148 aa7.24□□□□□ -1.25
C11orf54-201ENST00000331239 ATP5L2Q7Z4Y8 100 aa7.24□□□□□ -1.25
C11orf54-201ENST00000331239 SNHG12Q9BXW3 62 aa7.24□□□□□ -1.25
C11orf54-201ENST00000331239 SLC25A39Q9BZJ4 359 aaPredicted RBP7.24□□□□□ -1.25
C11orf54-201ENST00000331239 PAM16Q9Y3D7 125 aa7.24□□□□□ -1.25
C11orf54-201ENST00000331239 TRAV2A0A0B4J234 112 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 TRAV25A0A0B4J276 109 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 M0QZ24 198 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 TCRAP04437 139 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 KHDC1LQ5JSQ8 128 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 LEMD1Q68G75 181 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 C18orf32Q8TCD1 76 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 SGK494Q96LW2 274 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 MCRIP2Q9BUT9 160 aaKnown RBP7.23□□□□□ -1.25
C11orf54-201ENST00000331239 MLST8Q9BVC4 326 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 Q9H3A6 140 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 RPP21Q9H633 154 aaKnown RBP7.23□□□□□ -1.25
C11orf54-201ENST00000331239 IGHV7-4-1A0A0J9YVY3 117 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 DIRC3C9JPN6 131 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 H3BTX0 84 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 LTAP01374 205 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 TRBV12-3P01733 135 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 INSL3P51460 131 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 TDRG1Q3Y452 100 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 CT83Q5H943 113 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 GDF5OSQ5U4N7 250 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 C3orf56Q8N813 242 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 OR4B1Q8NGF8 309 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 ZNF492Q9P255 531 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 SMPXQ9UHP9 88 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 S4R3C0 116 aa7.23□□□□□ -1.25
C11orf54-201ENST00000331239 A0A087X0K7 114 aa7.22□□□□□ -1.25
C11orf54-201ENST00000331239 A0A1B0GXF2 115 aa7.22□□□□□ -1.25
C11orf54-201ENST00000331239 BUB3O43684 328 aa7.22□□□□□ -1.25
C11orf54-201ENST00000331239 PDE6HQ13956 83 aa7.22□□□□□ -1.25
C11orf54-201ENST00000331239 C8orf86Q6ZUL3 223 aa7.22□□□□□ -1.25
C11orf54-201ENST00000331239 MRPL52Q86TS9 123 aaKnown RBP7.22□□□□□ -1.25
C11orf54-201ENST00000331239 BPIFA4PQ86YQ2 179 aa7.22□□□□□ -1.25
C11orf54-201ENST00000331239 Q8N976 141 aa7.22□□□□□ -1.25
C11orf54-201ENST00000331239 OR9G4Q8NGQ1 327 aa7.22□□□□□ -1.25
C11orf54-201ENST00000331239 MIEN1Q9BRT3 115 aa7.22□□□□□ -1.25
C11orf54-201ENST00000331239 OTORQ9NRC9 128 aa7.22□□□□□ -1.25
C11orf54-201ENST00000331239 P01737 135 aa7.22□□□□□ -1.25
C11orf54-201ENST00000331239 ZNF705AQ6ZN79 300 aaPredicted RBP7.22□□□□□ -1.25
C11orf54-201ENST00000331239 Q86TA4 180 aa7.22□□□□□ -1.25
C11orf54-201ENST00000331239 NIT1Q86X76 327 aa7.22□□□□□ -1.25
C11orf54-201ENST00000331239 LYPD1Q8N2G4 141 aa7.22□□□□□ -1.25
C11orf54-201ENST00000331239 WFDC9Q8NEX5 89 aa7.22□□□□□ -1.25
C11orf54-201ENST00000331239 A8MWL6 223 aa7.21□□□□□ -1.26
C11orf54-201ENST00000331239 OVOL1O14753 267 aa7.21□□□□□ -1.26
C11orf54-201ENST00000331239 DLEU1O43261 78 aa7.21□□□□□ -1.26
C11orf54-201ENST00000331239 CAMPP49913 170 aa7.21□□□□□ -1.26
C11orf54-201ENST00000331239 HBBP68871 147 aa7.21□□□□□ -1.26
C11orf54-201ENST00000331239 TMEM213A2RRL7 107 aa7.21□□□□□ -1.26
C11orf54-201ENST00000331239 C19orf71A6NCJ1 209 aa7.21□□□□□ -1.26
C11orf54-201ENST00000331239 C2orf70A6NJV1 201 aa7.21□□□□□ -1.26
C11orf54-201ENST00000331239 NTF3P20783 257 aa7.21□□□□□ -1.26
C11orf54-201ENST00000331239 LINC00322Q6ZN03 302 aaPredicted RBP7.21□□□□□ -1.26
C11orf54-201ENST00000331239 TCF24Q7RTU0 167 aa7.21□□□□□ -1.26
C11orf54-201ENST00000331239 SMIM15Q7Z3B0 74 aa7.21□□□□□ -1.26
C11orf54-201ENST00000331239 FAM19A2Q8N3H0 131 aa7.21□□□□□ -1.26
C11orf54-201ENST00000331239 ALKBH7Q9BT30 221 aaPredicted RBP7.21□□□□□ -1.26
C11orf54-201ENST00000331239 SSBP4Q9BWG4 385 aaPredicted RBP7.21□□□□□ -1.26
C11orf54-201ENST00000331239 CHEK1O14757 476 aa7.2□□□□□ -1.26
C11orf54-201ENST00000331239 HSBP1O75506 76 aa7.2□□□□□ -1.26
C11orf54-201ENST00000331239 C3orf79P0CE67 100 aa7.2□□□□□ -1.26
C11orf54-201ENST00000331239 CMC4P56277 68 aaPredicted RBP7.2□□□□□ -1.26
C11orf54-201ENST00000331239 SRSF2Q01130 221 aaKnown RBP7.2□□□□□ -1.26
C11orf54-201ENST00000331239 UNQ9165/PRO28630Q6UXU0 137 aa7.2□□□□□ -1.26
C11orf54-201ENST00000331239 LINC00482Q8N8I6 264 aa7.2□□□□□ -1.26
C11orf54-201ENST00000331239 GLMPQ8WWB7 406 aa7.2□□□□□ -1.26
C11orf54-201ENST00000331239 BORCS7Q96B45 105 aa7.2□□□□□ -1.26
C11orf54-201ENST00000331239 DAZAP1Q96EP5 407 aaKnown RBP7.2□□□□□ -1.26
C11orf54-201ENST00000331239 SYNJ2BPP57105 145 aa7.2□□□□□ -1.26
C11orf54-201ENST00000331239 C18orf65Q6ZTR6 163 aa7.2□□□□□ -1.26
C11orf54-201ENST00000331239 OR2D3Q8NGH3 330 aa7.2□□□□□ -1.26
C11orf54-201ENST00000331239 DLX4Q92988 240 aaPredicted RBP7.2□□□□□ -1.26
C11orf54-201ENST00000331239 GFRA4Q9GZZ7 299 aa7.2□□□□□ -1.26
C11orf54-201ENST00000331239 TRAV8-1A0A0A6YYK1 113 aa7.19□□□□□ -1.26
C11orf54-201ENST00000331239 MRPS12O15235 138 aaKnown RBP7.19□□□□□ -1.26
C11orf54-201ENST00000331239 WIPF1O43516 503 aa7.19□□□□□ -1.26
C11orf54-201ENST00000331239 PF4P02776 101 aa7.19□□□□□ -1.26
C11orf54-201ENST00000331239 CSN3P07498 182 aa7.19□□□□□ -1.26
C11orf54-201ENST00000331239 PSG9Q00887 426 aa7.19□□□□□ -1.26
C11orf54-201ENST00000331239 NSUN5P1Q3KNT7 163 aa7.19□□□□□ -1.26
C11orf54-201ENST00000331239 GOLT1AQ6ZVE7 132 aa7.19□□□□□ -1.26
C11orf54-201ENST00000331239 EXOC3-AS1Q8N2X6 119 aa7.19□□□□□ -1.26
C11orf54-201ENST00000331239 GTSF1Q8WW33 167 aa7.19□□□□□ -1.26
C11orf54-201ENST00000331239 RHPN1-AS1Q9BWJ2 59 aa7.19□□□□□ -1.26
C11orf54-201ENST00000331239 NPIPB6E9PJ23 425 aa7.19□□□□□ -1.26
C11orf54-201ENST00000331239 CTRLP40313 264 aa7.19□□□□□ -1.26
C11orf54-201ENST00000331239 SLURP1P55000 103 aa7.19□□□□□ -1.26
C11orf54-201ENST00000331239 RNASEKQ6P5S7 137 aaKnown RBP7.19□□□□□ -1.26
C11orf54-201ENST00000331239 RBPMS2Q6ZRY4 209 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms