RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 IGKV2-40A0A087WW87 121 aaPredicted RBP18.95■□□□□ 0.62
SOX1-201ENST00000330949 LINC01549A6NIU2 74 aa18.95■□□□□ 0.62
SOX1-201ENST00000330949 IGKV2D-40P01614 121 aaPredicted RBP18.95■□□□□ 0.62
SOX1-201ENST00000330949 CRYGBP07316 175 aa18.95■□□□□ 0.62
SOX1-201ENST00000330949 GATA1P15976 413 aaPredicted RBP18.95■□□□□ 0.62
SOX1-201ENST00000330949 ORM1P02763 201 aa18.94■□□□□ 0.62
SOX1-201ENST00000330949 ZNF688P0C7X2 276 aa18.94■□□□□ 0.62
SOX1-201ENST00000330949 CCL8P80075 99 aa18.94■□□□□ 0.62
SOX1-201ENST00000330949 FAM27E3Q08E93 113 aa18.94■□□□□ 0.62
SOX1-201ENST00000330949 PTH2Q96A98 100 aa18.94■□□□□ 0.62
SOX1-201ENST00000330949 F8VRH5 84 aa18.94■□□□□ 0.62
SOX1-201ENST00000330949 H7C1H1 209 aa18.94■□□□□ 0.62
SOX1-201ENST00000330949 ZNF80P51504 273 aaPredicted RBP18.94■□□□□ 0.62
SOX1-201ENST00000330949 UFC1Q9Y3C8 167 aa18.94■□□□□ 0.62
SOX1-201ENST00000330949 UBE2D3P61077 147 aa18.93■□□□□ 0.62
SOX1-201ENST00000330949 UBE2D2P62837 147 aa18.93■□□□□ 0.62
SOX1-201ENST00000330949 DTX2Q86UW9 622 aa18.93■□□□□ 0.62
SOX1-201ENST00000330949 PPP1R27Q86WC6 154 aa18.93■□□□□ 0.62
SOX1-201ENST00000330949 B5MCH6 92 aa18.93■□□□□ 0.62
SOX1-201ENST00000330949 TRAV12-1A0A0B4J245 112 aa18.92■□□□□ 0.62
SOX1-201ENST00000330949 TNFRSF13BO14836 293 aaPredicted RBP18.92■□□□□ 0.62
SOX1-201ENST00000330949 CNTFRP26992 372 aa18.92■□□□□ 0.62
SOX1-201ENST00000330949 LRBAP50851 2863 aa18.92■□□□□ 0.62
SOX1-201ENST00000330949 LGALS1P09382 135 aaKnown RBP18.92■□□□□ 0.62
SOX1-201ENST00000330949 UBE2D1P51668 147 aa18.92■□□□□ 0.62
SOX1-201ENST00000330949 ZNF575Q86XF7 245 aa18.92■□□□□ 0.62
SOX1-201ENST00000330949 NBASA2RRP1 2371 aa18.91■□□□□ 0.62
SOX1-201ENST00000330949 Q8TAT8 98 aa18.91■□□□□ 0.62
SOX1-201ENST00000330949 SVEP1Q4LDE5 3571 aa18.91■□□□□ 0.62
SOX1-201ENST00000330949 A8MWV9 139 aa18.9■□□□□ 0.62
SOX1-201ENST00000330949 ZFP2Q6ZN57 461 aa18.9■□□□□ 0.62
SOX1-201ENST00000330949 TRBV20-1A0A075B6N2 111 aa18.9■□□□□ 0.62
SOX1-201ENST00000330949 TMEM95Q3KNT9 176 aa18.9■□□□□ 0.62
SOX1-201ENST00000330949 TMEM78Q5T7P6 136 aa18.9■□□□□ 0.62
SOX1-201ENST00000330949 RAXQ9Y2V3 346 aa18.89■□□□□ 0.61
SOX1-201ENST00000330949 FABP5P3A8MUU1 101 aa18.89■□□□□ 0.61
SOX1-201ENST00000330949 K7EIM0 57 aa18.89■□□□□ 0.61
SOX1-201ENST00000330949 PRB3Q04118 309 aaPredicted RBP18.88■□□□□ 0.61
SOX1-201ENST00000330949 SBSPONQ8IVN8 264 aa18.88■□□□□ 0.61
SOX1-201ENST00000330949 ZZEF1O43149 2961 aa18.88■□□□□ 0.61
SOX1-201ENST00000330949 OR11H6Q8NGC7 330 aa18.88■□□□□ 0.61
SOX1-201ENST00000330949 CITED1Q99966 193 aa18.88■□□□□ 0.61
SOX1-201ENST00000330949 APC2O95996 2303 aa18.88■□□□□ 0.61
SOX1-201ENST00000330949 SRD5A1P18405 259 aa18.87■□□□□ 0.61
SOX1-201ENST00000330949 SFTA2Q6UW10 78 aa18.87■□□□□ 0.61
SOX1-201ENST00000330949 FAM215AQ9Y5M1 114 aa18.87■□□□□ 0.61
SOX1-201ENST00000330949 EFNA4P52798 201 aa18.87■□□□□ 0.61
SOX1-201ENST00000330949 SRSF9Q13242 221 aaKnown RBP eCLIP18.87■□□□□ 0.61
SOX1-201ENST00000330949 ZNF318Q5VUA4 2279 aa18.86■□□□□ 0.61
SOX1-201ENST00000330949 FCN3O75636 299 aa18.86■□□□□ 0.61
SOX1-201ENST00000330949 FAM90A27PA6NNH2 459 aa18.86■□□□□ 0.61
SOX1-201ENST00000330949 SCGB1D4Q6XE38 83 aa18.86■□□□□ 0.61
SOX1-201ENST00000330949 SRSF8Q9BRL6 282 aaKnown RBP18.86■□□□□ 0.61
SOX1-201ENST00000330949 CEP295Q9C0D2 2601 aa18.85■□□□□ 0.61
SOX1-201ENST00000330949 PSMG3-AS1Q96PY0 264 aa18.85■□□□□ 0.61
SOX1-201ENST00000330949 TRBV7-9A0A0J9YWB2 115 aa18.85■□□□□ 0.61
SOX1-201ENST00000330949 NDUFB3O43676 98 aa18.85■□□□□ 0.61
SOX1-201ENST00000330949 NHLRC4P0CG21 123 aaPredicted RBP18.85■□□□□ 0.61
SOX1-201ENST00000330949 C3orf36Q3SXR2 165 aa18.85■□□□□ 0.61
SOX1-201ENST00000330949 NRACQ8N912 160 aa18.85■□□□□ 0.61
SOX1-201ENST00000330949 FAM110AQ9BQ89 295 aa18.85■□□□□ 0.61
SOX1-201ENST00000330949 RAB1BQ9H0U4 201 aa18.85■□□□□ 0.61
SOX1-201ENST00000330949 SPTA1P02549 2419 aa18.84■□□□□ 0.61
SOX1-201ENST00000330949 RHODO00212 210 aa18.84■□□□□ 0.61
SOX1-201ENST00000330949 FBXL15Q9H469 300 aa18.84■□□□□ 0.61
SOX1-201ENST00000330949 MALRD1Q5VYJ5 2156 aa18.84■□□□□ 0.61
SOX1-201ENST00000330949 ZNF815PA8K554 130 aa18.84■□□□□ 0.61
SOX1-201ENST00000330949 RPL7P18124 248 aaKnown RBP18.84■□□□□ 0.61
SOX1-201ENST00000330949 TCL1BO95988 128 aa18.83■□□□□ 0.61
SOX1-201ENST00000330949 IL17RELQ6ZVW7 336 aa18.83■□□□□ 0.61
SOX1-201ENST00000330949 DLX1P56177 255 aa18.83■□□□□ 0.6
SOX1-201ENST00000330949 ANKRD29Q8N6D5 301 aa18.83■□□□□ 0.6
SOX1-201ENST00000330949 LINC01548A6NM66 108 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 IGHV1-8P0DP01 117 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 IGFL2Q6UWQ7 119 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 PRADC1Q9BSG0 188 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 CD7P09564 240 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE12JA6NER3 117 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 H3BVH4 76 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE7O76087 117 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE12FP0CL80 117 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE12GP0CL81 117 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE12IP0CL82 117 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 ASIPP42127 132 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 DLX6P56179 175 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE2BQ13066 116 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE4Q13068 117 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE2EQ4V326 116 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE2DQ9UEU5 116 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 MBD3L4A6NDZ8 208 aaPredicted RBP18.81■□□□□ 0.6
SOX1-201ENST00000330949 MBD3L3A6NE82 208 aaPredicted RBP18.81■□□□□ 0.6
SOX1-201ENST00000330949 MBD3L5A6NJ08 208 aaPredicted RBP18.81■□□□□ 0.6
SOX1-201ENST00000330949 SHISA2Q6UWI4 295 aa18.81■□□□□ 0.6
SOX1-201ENST00000330949 MBD3L2Q8NHZ7 208 aaPredicted RBP18.81■□□□□ 0.6
SOX1-201ENST00000330949 KIR2DL4Q99706 377 aa18.81■□□□□ 0.6
SOX1-201ENST00000330949 PIP4P1Q86T03 277 aa18.81■□□□□ 0.6
SOX1-201ENST00000330949 NDUFV3P56181 108 aaKnown RBP18.8■□□□□ 0.6
SOX1-201ENST00000330949 ZNF672Q499Z4 452 aaPredicted RBP18.8■□□□□ 0.6
SOX1-201ENST00000330949 NDUFA11Q86Y39 141 aa18.8■□□□□ 0.6
SOX1-201ENST00000330949 TRGV3P03979 118 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms