RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 PRR20DP86480 221 aa16.65■□□□□ 0.26
RNF40-201ENST00000324685 PRR20BP86481 221 aa16.65■□□□□ 0.26
RNF40-201ENST00000324685 PRR20AP86496 221 aa16.65■□□□□ 0.26
RNF40-201ENST00000324685 C12orf74Q32Q52 190 aa16.64■□□□□ 0.25
RNF40-201ENST00000324685 MPDZO75970 2070 aa16.64■□□□□ 0.25
RNF40-201ENST00000324685 ANGP03950 147 aaKnown RBP16.64■□□□□ 0.25
RNF40-201ENST00000324685 K7ERJ3 54 aa16.64■□□□□ 0.25
RNF40-201ENST00000324685 ZNF503-AS2A6NEH8 195 aa16.64■□□□□ 0.25
RNF40-201ENST00000324685 CFHR4Q92496 578 aa16.63■□□□□ 0.25
RNF40-201ENST00000324685 KAAG1Q9UBP8 84 aa16.63■□□□□ 0.25
RNF40-201ENST00000324685 DKK2Q9UBU2 259 aa16.63■□□□□ 0.25
RNF40-201ENST00000324685 SIP14410 1827 aa16.63■□□□□ 0.25
RNF40-201ENST00000324685 ZNF491Q8N8L2 437 aa16.63■□□□□ 0.25
RNF40-201ENST00000324685 IGF2BP2-AS1Q96M15 143 aa16.63■□□□□ 0.25
RNF40-201ENST00000324685 H3BMG7 143 aa16.62■□□□□ 0.25
RNF40-201ENST00000324685 SCN5AQ14524 2016 aa16.62■□□□□ 0.25
RNF40-201ENST00000324685 MAPK1IP1LQ8NDC0 245 aa16.62■□□□□ 0.25
RNF40-201ENST00000324685 ARHGEF17Q96PE2 2063 aaPredicted RBP16.62■□□□□ 0.25
RNF40-201ENST00000324685 ZNF318Q5VUA4 2279 aa16.62■□□□□ 0.25
RNF40-201ENST00000324685 K7EN84 100 aa16.62■□□□□ 0.25
RNF40-201ENST00000324685 FAM120AOSQ5T036 256 aa16.62■□□□□ 0.25
RNF40-201ENST00000324685 PLXNA3P51805 1871 aa16.62■□□□□ 0.25
RNF40-201ENST00000324685 WIPF3A6NGB9 483 aa16.61■□□□□ 0.25
RNF40-201ENST00000324685 CGB3P0DN86 165 aa16.61■□□□□ 0.25
RNF40-201ENST00000324685 MRAPQ8TCY5 172 aa16.61■□□□□ 0.25
RNF40-201ENST00000324685 LENEPQ9Y5L5 61 aa16.61■□□□□ 0.25
RNF40-201ENST00000324685 IGLV3-1P01715 115 aa16.6■□□□□ 0.25
RNF40-201ENST00000324685 HERV-K104P63124 156 aa16.6■□□□□ 0.25
RNF40-201ENST00000324685 ZSWIM8A7E2V4 1837 aa16.6■□□□□ 0.25
RNF40-201ENST00000324685 SPTA1P02549 2419 aa16.6■□□□□ 0.25
RNF40-201ENST00000324685 TRAV12-1A0A0B4J245 112 aa16.6■□□□□ 0.25
RNF40-201ENST00000324685 TINCRA0A1B0GVN0 87 aa16.6■□□□□ 0.25
RNF40-201ENST00000324685 CFC1BP0CG36 223 aa16.6■□□□□ 0.25
RNF40-201ENST00000324685 CFC1P0CG37 223 aa16.6■□□□□ 0.25
RNF40-201ENST00000324685 DIAPH2-AS1Q14236 149 aa16.6■□□□□ 0.25
RNF40-201ENST00000324685 ZNF747Q9BV97 191 aa16.59■□□□□ 0.25
RNF40-201ENST00000324685 ORMDL1Q9P0S3 153 aa16.59■□□□□ 0.25
RNF40-201ENST00000324685 LINC01545Q5VT33 79 aa16.59■□□□□ 0.25
RNF40-201ENST00000324685 SLC25A29Q8N8R3 303 aa16.59■□□□□ 0.25
RNF40-201ENST00000324685 LY6G6EA0A0G2JKS1 128 aa16.58■□□□□ 0.25
RNF40-201ENST00000324685 CRYGCP07315 174 aa16.58■□□□□ 0.25
RNF40-201ENST00000324685 DYNAPQ8N1N2 210 aa16.58■□□□□ 0.25
RNF40-201ENST00000324685 U3KQA8 63 aa16.58■□□□□ 0.25
RNF40-201ENST00000324685 SHISA9B4DS77 424 aa16.58■□□□□ 0.24
RNF40-201ENST00000324685 ANK1P16157 1881 aa16.58■□□□□ 0.24
RNF40-201ENST00000324685 hADV29S1A0JD25 119 aa16.58■□□□□ 0.24
RNF40-201ENST00000324685 RNASE13Q5GAN3 156 aaKnown RBP16.58■□□□□ 0.24
RNF40-201ENST00000324685 NTN5Q8WTR8 489 aaPredicted RBP16.58■□□□□ 0.24
RNF40-201ENST00000324685 HOXB4P17483 251 aaPredicted RBP16.57■□□□□ 0.24
RNF40-201ENST00000324685 PRSS47A8MTI9 375 aa16.57■□□□□ 0.24
RNF40-201ENST00000324685 TMEM258P61165 79 aa16.57■□□□□ 0.24
RNF40-201ENST00000324685 RSPO1Q2MKA7 263 aaPredicted RBP16.57■□□□□ 0.24
RNF40-201ENST00000324685 C15orf53Q8NAA6 179 aa16.57■□□□□ 0.24
RNF40-201ENST00000324685 TRPM7Q96QT4 1865 aa16.57■□□□□ 0.24
RNF40-201ENST00000324685 A0A096LPF7 62 aa16.56■□□□□ 0.24
RNF40-201ENST00000324685 IGLC7A0M8Q6 106 aa16.56■□□□□ 0.24
RNF40-201ENST00000324685 ACYP1P07311 99 aa16.56■□□□□ 0.24
RNF40-201ENST00000324685 EGR2P11161 476 aaPredicted RBP16.56■□□□□ 0.24
RNF40-201ENST00000324685 CRYBA4P53673 196 aa16.56■□□□□ 0.24
RNF40-201ENST00000324685 C22orf46C9J442 243 aa16.56■□□□□ 0.24
RNF40-201ENST00000324685 PKIGQ9Y2B9 76 aa16.56■□□□□ 0.24
RNF40-201ENST00000324685 GNRH2O43555 120 aa16.55■□□□□ 0.24
RNF40-201ENST00000324685 AGPAT4-IT1Q9H0P7 198 aa16.55■□□□□ 0.24
RNF40-201ENST00000324685 U3KQE9 123 aa16.55■□□□□ 0.24
RNF40-201ENST00000324685 BAALC-AS2P0C853 105 aa16.55■□□□□ 0.24
RNF40-201ENST00000324685 CLPSL2Q6UWE3 100 aa16.55■□□□□ 0.24
RNF40-201ENST00000324685 WISP1O95388 367 aa16.55■□□□□ 0.24
RNF40-201ENST00000324685 CGB7P0DN87 165 aa16.55■□□□□ 0.24
RNF40-201ENST00000324685 LYPD6BQ8NI32 183 aa16.55■□□□□ 0.24
RNF40-201ENST00000324685 C17orf77Q96MU5 243 aa16.55■□□□□ 0.24
RNF40-201ENST00000324685 Q9H8V8 135 aa16.55■□□□□ 0.24
RNF40-201ENST00000324685 NOP10Q9NPE3 64 aaKnown RBP16.54■□□□□ 0.24
RNF40-201ENST00000324685 TP53BP1Q12888 1972 aaPredicted RBP16.54■□□□□ 0.24
RNF40-201ENST00000324685 ASPHD1Q5U4P2 390 aa16.54■□□□□ 0.24
RNF40-201ENST00000324685 IL15RAQ13261 267 aa16.54■□□□□ 0.24
RNF40-201ENST00000324685 SDK2Q58EX2 2172 aa16.54■□□□□ 0.24
RNF40-201ENST00000324685 CACNA1DQ01668 2161 aa16.54■□□□□ 0.24
RNF40-201ENST00000324685 LTBP1Q14766 1721 aa16.54■□□□□ 0.24
RNF40-201ENST00000324685 NBL1P41271 181 aa16.54■□□□□ 0.24
RNF40-201ENST00000324685 XCL1P47992 114 aa16.54■□□□□ 0.24
RNF40-201ENST00000324685 AMTNQ6UX39 209 aa16.53■□□□□ 0.24
RNF40-201ENST00000324685 FOXE3Q13461 319 aa16.53■□□□□ 0.24
RNF40-201ENST00000324685 CITED1Q99966 193 aa16.53■□□□□ 0.24
RNF40-201ENST00000324685 FAM215AQ9Y5M1 114 aa16.53■□□□□ 0.24
RNF40-201ENST00000324685 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.52■□□□□ 0.24
RNF40-201ENST00000324685 IGKV2-29A2NJV5 120 aaPredicted RBP16.52■□□□□ 0.24
RNF40-201ENST00000324685 RNF152Q8N8N0 203 aa16.52■□□□□ 0.24
RNF40-201ENST00000324685 UBE2BP63146 152 aa16.52■□□□□ 0.23
RNF40-201ENST00000324685 VPREB3Q9UKI3 123 aa16.51■□□□□ 0.23
RNF40-201ENST00000324685 IGKV2D-24A0A075B6R9 120 aa16.51■□□□□ 0.23
RNF40-201ENST00000324685 Q8NFD4 153 aa16.51■□□□□ 0.23
RNF40-201ENST00000324685 NDUFS5O43920 106 aa16.5■□□□□ 0.23
RNF40-201ENST00000324685 SBF1O95248 1867 aa16.5■□□□□ 0.23
RNF40-201ENST00000324685 F6UB75 175 aa16.5■□□□□ 0.23
RNF40-201ENST00000324685 ZNF524Q96C55 264 aa16.5■□□□□ 0.23
RNF40-201ENST00000324685 ZMAT4Q9H898 229 aa16.5■□□□□ 0.23
RNF40-201ENST00000324685 IGKV1OR2-108A0A075B7D4 117 aa16.49■□□□□ 0.23
RNF40-201ENST00000324685 LHBP01229 141 aa16.49■□□□□ 0.23
RNF40-201ENST00000324685 RBM3P98179 157 aaKnown RBP16.49■□□□□ 0.23
RNF40-201ENST00000324685 PTPRDP23468 1912 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms