RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 SCGB1D1O95968 90 aa13.9□□□□□ -0.18
CCDC43-201ENST00000315286 IGLC6P0CF74 106 aa13.9□□□□□ -0.18
CCDC43-201ENST00000315286 FAM19A2Q8N3H0 131 aa13.9□□□□□ -0.18
CCDC43-201ENST00000315286 RNF152Q8N8N0 203 aa13.9□□□□□ -0.18
CCDC43-201ENST00000315286 FER1L6-AS1Q8NA97 138 aa13.9□□□□□ -0.18
CCDC43-201ENST00000315286 UBE2E2Q96LR5 201 aa13.9□□□□□ -0.18
CCDC43-201ENST00000315286 ACANP16112 2415 aa13.9□□□□□ -0.18
CCDC43-201ENST00000315286 LINC00587B1AMM8 73 aa13.89□□□□□ -0.19
CCDC43-201ENST00000315286 LINC01559Q495D7 138 aa13.89□□□□□ -0.19
CCDC43-201ENST00000315286 C11orf21Q9P2W6 132 aa13.89□□□□□ -0.19
CCDC43-201ENST00000315286 IGHV4OR15-8A0A075B7B6 117 aa13.89□□□□□ -0.19
CCDC43-201ENST00000315286 A0A087WW49 117 aa13.89□□□□□ -0.19
CCDC43-201ENST00000315286 OVOL1O14753 267 aa13.89□□□□□ -0.19
CCDC43-201ENST00000315286 CTRLP40313 264 aa13.89□□□□□ -0.19
CCDC43-201ENST00000315286 HIST1H1AQ02539 215 aaPredicted RBP13.89□□□□□ -0.19
CCDC43-201ENST00000315286 IGKV3D-20A0A0C4DH25 116 aa13.88□□□□□ -0.19
CCDC43-201ENST00000315286 Q6ZQT7 251 aa13.88□□□□□ -0.19
CCDC43-201ENST00000315286 ZNF493Q6ZR52 646 aa13.88□□□□□ -0.19
CCDC43-201ENST00000315286 NIT1Q86X76 327 aa13.88□□□□□ -0.19
CCDC43-201ENST00000315286 OR10J6PQ8NGY7 276 aa13.88□□□□□ -0.19
CCDC43-201ENST00000315286 URB1-AS1Q96HZ7 61 aa13.88□□□□□ -0.19
CCDC43-201ENST00000315286 LINC00477Q96M19 166 aa13.88□□□□□ -0.19
CCDC43-201ENST00000315286 RNF114Q9Y508 228 aa13.88□□□□□ -0.19
CCDC43-201ENST00000315286 RNASEKQ6P5S7 137 aaKnown RBP13.87□□□□□ -0.19
CCDC43-201ENST00000315286 TEX29Q8N6K0 151 aa13.87□□□□□ -0.19
CCDC43-201ENST00000315286 NAGKQ9UJ70 344 aa13.87□□□□□ -0.19
CCDC43-201ENST00000315286 F6UB75 175 aa13.87□□□□□ -0.19
CCDC43-201ENST00000315286 M0QZ24 198 aa13.87□□□□□ -0.19
CCDC43-201ENST00000315286 NTF3P20783 257 aa13.87□□□□□ -0.19
CCDC43-201ENST00000315286 SYNJ2BPP57105 145 aa13.87□□□□□ -0.19
CCDC43-201ENST00000315286 KRTAP1-1Q07627 177 aa13.87□□□□□ -0.19
CCDC43-201ENST00000315286 GCN1Q92616 2671 aaKnown RBP13.87□□□□□ -0.19
CCDC43-201ENST00000315286 AKAP9Q99996 3911 aa13.86□□□□□ -0.19
CCDC43-201ENST00000315286 HSBP1O75506 76 aa13.86□□□□□ -0.19
CCDC43-201ENST00000315286 PRR9Q5T870 116 aa13.86□□□□□ -0.19
CCDC43-201ENST00000315286 TMEM86BQ8N661 226 aa13.86□□□□□ -0.19
CCDC43-201ENST00000315286 KLHDC1Q8N7A1 406 aa13.86□□□□□ -0.19
CCDC43-201ENST00000315286 FOXC2Q99958 501 aa13.86□□□□□ -0.19
CCDC43-201ENST00000315286 LENEPQ9Y5L5 61 aa13.86□□□□□ -0.19
CCDC43-201ENST00000315286 C18orf65Q6ZTR6 163 aa13.86□□□□□ -0.19
CCDC43-201ENST00000315286 WFDC3Q8IUB2 231 aa13.86□□□□□ -0.19
CCDC43-201ENST00000315286 DCANP1Q8TF63 244 aa13.86□□□□□ -0.19
CCDC43-201ENST00000315286 PRO1933Q9H354 126 aa13.86□□□□□ -0.19
CCDC43-201ENST00000315286 HOXD3P31249 432 aaPredicted RBP13.85□□□□□ -0.19
CCDC43-201ENST00000315286 TWIST1Q15672 202 aa13.85□□□□□ -0.19
CCDC43-201ENST00000315286 REC114Q7Z4M0 266 aa13.85□□□□□ -0.19
CCDC43-201ENST00000315286 OR8A1Q8NGG7 326 aa13.85□□□□□ -0.19
CCDC43-201ENST00000315286 J3KRW8 73 aa13.84□□□□□ -0.19
CCDC43-201ENST00000315286 ZNF664Q8N3J9 261 aa13.84□□□□□ -0.19
CCDC43-201ENST00000315286 ZFAND2AQ8N6M9 145 aa13.84□□□□□ -0.19
CCDC43-201ENST00000315286 LGALS9O00182 355 aa13.84□□□□□ -0.19
CCDC43-201ENST00000315286 FAM104BQ5XKR9 115 aa13.84□□□□□ -0.19
CCDC43-201ENST00000315286 AMN1Q8IY45 258 aa13.84□□□□□ -0.19
CCDC43-201ENST00000315286 CNFNQ9BYD5 112 aa13.84□□□□□ -0.19
CCDC43-201ENST00000315286 MSRB1Q9NZV6 116 aa13.84□□□□□ -0.19
CCDC43-201ENST00000315286 DNAJC9-AS1A6NH13 148 aa13.83□□□□□ -0.2
CCDC43-201ENST00000315286 KRTDAPP60985 99 aa13.83□□□□□ -0.2
CCDC43-201ENST00000315286 PKIAP61925 76 aa13.83□□□□□ -0.2
CCDC43-201ENST00000315286 NF1P21359 2839 aa13.83□□□□□ -0.2
CCDC43-201ENST00000315286 DEFB136Q30KP8 78 aa13.83□□□□□ -0.2
CCDC43-201ENST00000315286 FAM19A4Q96LR4 140 aa13.83□□□□□ -0.2
CCDC43-201ENST00000315286 MS4A6AQ9H2W1 248 aa13.83□□□□□ -0.2
CCDC43-201ENST00000315286 M0R2Z0 102 aa13.82□□□□□ -0.2
CCDC43-201ENST00000315286 CD5LO43866 347 aa13.82□□□□□ -0.2
CCDC43-201ENST00000315286 ID1P41134 155 aa13.82□□□□□ -0.2
CCDC43-201ENST00000315286 TFPI2P48307 235 aa13.82□□□□□ -0.2
CCDC43-201ENST00000315286 TCTEX1D4Q5JR98 221 aa13.82□□□□□ -0.2
CCDC43-201ENST00000315286 Q6ZSV7 163 aa13.82□□□□□ -0.2
CCDC43-201ENST00000315286 YAE1D1Q9NRH1 226 aa13.82□□□□□ -0.2
CCDC43-201ENST00000315286 ANK3Q12955 4377 aaKnown RBP13.82□□□□□ -0.2
CCDC43-201ENST00000315286 LINC00614P0C842 121 aa13.81□□□□□ -0.2
CCDC43-201ENST00000315286 ESM1Q9NQ30 184 aa13.81□□□□□ -0.2
CCDC43-201ENST00000315286 FASNP49327 2511 aaKnown RBP13.81□□□□□ -0.2
CCDC43-201ENST00000315286 SAMD13Q5VXD3 122 aa13.81□□□□□ -0.2
CCDC43-201ENST00000315286 CHCHD1Q96BP2 118 aaKnown RBP13.81□□□□□ -0.2
CCDC43-201ENST00000315286 C2orf70A6NJV1 201 aa13.8□□□□□ -0.2
CCDC43-201ENST00000315286 D6R8Y8 96 aa13.8□□□□□ -0.2
CCDC43-201ENST00000315286 TSTD3H0UI37 97 aa13.8□□□□□ -0.2
CCDC43-201ENST00000315286 CSN3P07498 182 aa13.8□□□□□ -0.2
CCDC43-201ENST00000315286 SLURP1P55000 103 aa13.8□□□□□ -0.2
CCDC43-201ENST00000315286 PMCHL1Q16048 86 aa13.8□□□□□ -0.2
CCDC43-201ENST00000315286 MRPL51Q4U2R6 128 aaKnown RBP13.8□□□□□ -0.2
CCDC43-201ENST00000315286 Q8N976 141 aa13.8□□□□□ -0.2
CCDC43-201ENST00000315286 CUBNO60494 3623 aa13.8□□□□□ -0.2
CCDC43-201ENST00000315286 C3orf79P0CE67 100 aa13.79□□□□□ -0.2
CCDC43-201ENST00000315286 KIR3DS1Q14943 382 aa13.79□□□□□ -0.2
CCDC43-201ENST00000315286 TMEM191AQ9H0A3 160 aa13.79□□□□□ -0.2
CCDC43-201ENST00000315286 U3KQK5 164 aa13.79□□□□□ -0.2
CCDC43-201ENST00000315286 SORL1Q92673 2214 aa13.79□□□□□ -0.2
CCDC43-201ENST00000315286 HECTD1Q9ULT8 2610 aa13.78□□□□□ -0.2
CCDC43-201ENST00000315286 TRAV21A0A0B4J279 112 aa13.78□□□□□ -0.2
CCDC43-201ENST00000315286 ZNF688P0C7X2 276 aa13.78□□□□□ -0.2
CCDC43-201ENST00000315286 RNASE4P34096 147 aaKnown RBP13.78□□□□□ -0.2
CCDC43-201ENST00000315286 HIST2H2BDQ6DRA6 164 aa13.78□□□□□ -0.2
CCDC43-201ENST00000315286 ADAMTSL5Q6ZMM2 481 aa13.78□□□□□ -0.2
CCDC43-201ENST00000315286 IGHV1-24A0A0C4DH33 117 aa13.78□□□□□ -0.2
CCDC43-201ENST00000315286 TDRG1Q3Y452 100 aa13.78□□□□□ -0.2
CCDC43-201ENST00000315286 APRG1Q8IVJ8 170 aa13.78□□□□□ -0.2
CCDC43-201ENST00000315286 OR10AG1Q8NH19 301 aa13.78□□□□□ -0.2
CCDC43-201ENST00000315286 MTORP42345 2549 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms