RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 FABP5P3A8MUU1 101 aa12.8□□□□□ -0.36
SSH3-201ENST00000308127 IGF1P05019 195 aa12.8□□□□□ -0.36
SSH3-201ENST00000308127 ODF1Q14990 250 aa12.8□□□□□ -0.36
SSH3-201ENST00000308127 ZC2HC1BQ5TFG8 222 aa12.8□□□□□ -0.36
SSH3-201ENST00000308127 TRAV40A0A0B4J280 105 aa12.8□□□□□ -0.36
SSH3-201ENST00000308127 LCNL1Q6ZST4 164 aa12.8□□□□□ -0.36
SSH3-201ENST00000308127 TTC9CQ8N5M4 171 aa12.8□□□□□ -0.36
SSH3-201ENST00000308127 SRSF8Q9BRL6 282 aaKnown RBP12.8□□□□□ -0.36
SSH3-201ENST00000308127 OR1N2Q8NGR9 330 aa12.79□□□□□ -0.36
SSH3-201ENST00000308127 ODF3BA8MYP8 253 aa12.79□□□□□ -0.36
SSH3-201ENST00000308127 K7EP34 96 aa12.79□□□□□ -0.36
SSH3-201ENST00000308127 ATP6V0E1O15342 81 aa12.79□□□□□ -0.36
SSH3-201ENST00000308127 PRTN3P24158 256 aa12.79□□□□□ -0.36
SSH3-201ENST00000308127 GTF2H5Q6ZYL4 71 aa12.79□□□□□ -0.36
SSH3-201ENST00000308127 TIMD4Q96H15 378 aa12.79□□□□□ -0.36
SSH3-201ENST00000308127 AGPAT4-IT1Q9H0P7 198 aa12.79□□□□□ -0.36
SSH3-201ENST00000308127 NHP2Q9NX24 153 aaKnown RBP12.79□□□□□ -0.36
SSH3-201ENST00000308127 IGKV3-7A0A075B6H7 116 aa12.79□□□□□ -0.36
SSH3-201ENST00000308127 TMEM8BA6NDV4 472 aa12.79□□□□□ -0.36
SSH3-201ENST00000308127 HHLA3Q9XRX5 114 aa12.79□□□□□ -0.36
SSH3-201ENST00000308127 VKORC1Q9BQB6 163 aa12.78□□□□□ -0.36
SSH3-201ENST00000308127 CREBBPQ92793 2442 aa12.78□□□□□ -0.36
SSH3-201ENST00000308127 A0A1W2PPM0 123 aa12.78□□□□□ -0.36
SSH3-201ENST00000308127 FCER1GP30273 86 aa12.78□□□□□ -0.36
SSH3-201ENST00000308127 RPL24P83731 157 aaKnown RBP12.78□□□□□ -0.36
SSH3-201ENST00000308127 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.78□□□□□ -0.36
SSH3-201ENST00000308127 MRPL35Q9NZE8 188 aaKnown RBP12.78□□□□□ -0.36
SSH3-201ENST00000308127 TMEM219Q86XT9 240 aa12.77□□□□□ -0.36
SSH3-201ENST00000308127 OR9G4Q8NGQ1 327 aa12.77□□□□□ -0.36
SSH3-201ENST00000308127 CSPG4Q6UVK1 2322 aa12.77□□□□□ -0.37
SSH3-201ENST00000308127 MAPKAPK5-AS1Q8N8E1 139 aa12.77□□□□□ -0.37
SSH3-201ENST00000308127 Q8N9W7 124 aa12.77□□□□□ -0.37
SSH3-201ENST00000308127 CHAC1Q9BUX1 264 aa12.77□□□□□ -0.37
SSH3-201ENST00000308127 MSRB2Q9Y3D2 182 aa12.77□□□□□ -0.37
SSH3-201ENST00000308127 BUB3O43684 328 aa12.76□□□□□ -0.37
SSH3-201ENST00000308127 GOSR1O95249 250 aa12.76□□□□□ -0.37
SSH3-201ENST00000308127 H3BVH4 76 aa12.76□□□□□ -0.37
SSH3-201ENST00000308127 IGKCP01834 107 aa12.76□□□□□ -0.37
SSH3-201ENST00000308127 SMIM17P0DL12 118 aa12.76□□□□□ -0.37
SSH3-201ENST00000308127 SMIM15Q7Z3B0 74 aa12.76□□□□□ -0.37
SSH3-201ENST00000308127 CSMD2Q7Z408 3487 aa12.76□□□□□ -0.37
SSH3-201ENST00000308127 SORL1Q92673 2214 aa12.76□□□□□ -0.37
SSH3-201ENST00000308127 SAMD5Q5TGI4 173 aa12.75□□□□□ -0.37
SSH3-201ENST00000308127 S100A7AQ86SG5 101 aa12.75□□□□□ -0.37
SSH3-201ENST00000308127 OR4X2Q8NGF9 303 aa12.75□□□□□ -0.37
SSH3-201ENST00000308127 CSTL1Q9H114 145 aa12.75□□□□□ -0.37
SSH3-201ENST00000308127 TRBV25-1A0A075B6N4 114 aa12.75□□□□□ -0.37
SSH3-201ENST00000308127 A0A1W2PPR1 153 aa12.75□□□□□ -0.37
SSH3-201ENST00000308127 RPS20P60866 119 aaKnown RBP12.75□□□□□ -0.37
SSH3-201ENST00000308127 DOPEY2Q9Y3R5 2298 aa12.75□□□□□ -0.37
SSH3-201ENST00000308127 PRR9Q5T870 116 aa12.75□□□□□ -0.37
SSH3-201ENST00000308127 CCDC140Q96MF4 163 aa12.75□□□□□ -0.37
SSH3-201ENST00000308127 PSMG3-AS1Q96PY0 264 aa12.75□□□□□ -0.37
SSH3-201ENST00000308127 ZFAND3Q9H8U3 227 aa12.75□□□□□ -0.37
SSH3-201ENST00000308127 CLPSL1A2RUU4 121 aa12.74□□□□□ -0.37
SSH3-201ENST00000308127 SMIM13P0DJ93 91 aa12.74□□□□□ -0.37
SSH3-201ENST00000308127 SPANXN1Q5VSR9 72 aa12.74□□□□□ -0.37
SSH3-201ENST00000308127 DPF1Q92782 380 aa12.74□□□□□ -0.37
SSH3-201ENST00000308127 TRAV8-2A0A0B4J237 113 aa12.73□□□□□ -0.37
SSH3-201ENST00000308127 M0R381 172 aa12.73□□□□□ -0.37
SSH3-201ENST00000308127 FABP2P12104 132 aa12.73□□□□□ -0.37
SSH3-201ENST00000308127 Q8N6K4 173 aa12.73□□□□□ -0.37
SSH3-201ENST00000308127 ZNF502Q8TBZ5 544 aa12.73□□□□□ -0.37
SSH3-201ENST00000308127 CENPEQ02224 2701 aa12.73□□□□□ -0.37
SSH3-201ENST00000308127 GLMPQ8WWB7 406 aa12.73□□□□□ -0.37
SSH3-201ENST00000308127 COL25A1Q9BXS0 654 aaPredicted RBP12.73□□□□□ -0.37
SSH3-201ENST00000308127 AMTNQ6UX39 209 aa12.72□□□□□ -0.37
SSH3-201ENST00000308127 TMEM78Q5T7P6 136 aa12.72□□□□□ -0.37
SSH3-201ENST00000308127 C8orf86Q6ZUL3 223 aa12.72□□□□□ -0.37
SSH3-201ENST00000308127 NPFFR1Q9GZQ6 430 aa12.72□□□□□ -0.37
SSH3-201ENST00000308127 M0R1W7 72 aa12.71□□□□□ -0.37
SSH3-201ENST00000308127 DPM2O94777 84 aa12.71□□□□□ -0.37
SSH3-201ENST00000308127 LINC01559Q495D7 138 aa12.71□□□□□ -0.37
SSH3-201ENST00000308127 CCDC144NLQ6NUI1 221 aa12.71□□□□□ -0.37
SSH3-201ENST00000308127 SFTA2Q6UW10 78 aa12.71□□□□□ -0.37
SSH3-201ENST00000308127 NXT2Q9NPJ8 142 aaKnown RBP12.71□□□□□ -0.37
SSH3-201ENST00000308127 HIF1ANQ9NWT6 349 aa12.71□□□□□ -0.37
SSH3-201ENST00000308127 UTP20O75691 2785 aaKnown RBP12.71□□□□□ -0.37
SSH3-201ENST00000308127 TEX48A0A1B0GUV7 120 aa12.71□□□□□ -0.37
SSH3-201ENST00000308127 SAA4P35542 130 aa12.71□□□□□ -0.37
SSH3-201ENST00000308127 NEGR1Q7Z3B1 354 aa12.71□□□□□ -0.37
SSH3-201ENST00000308127 WFDC12Q8WWY7 111 aa12.71□□□□□ -0.37
SSH3-201ENST00000308127 ZNF48Q96MX3 618 aaPredicted RBP12.71□□□□□ -0.37
SSH3-201ENST00000308127 IGHV7-4-1A0A0J9YVY3 117 aa12.71□□□□□ -0.38
SSH3-201ENST00000308127 ADORA2A-AS1P86434 159 aa12.71□□□□□ -0.38
SSH3-201ENST00000308127 COX8CQ7Z4L0 72 aa12.71□□□□□ -0.38
SSH3-201ENST00000308127 IGLV2-18A0A075B6J9 118 aa12.7□□□□□ -0.38
SSH3-201ENST00000308127 F6UB75 175 aa12.7□□□□□ -0.38
SSH3-201ENST00000308127 G3V4G9 280 aa12.7□□□□□ -0.38
SSH3-201ENST00000308127 Q8N8P6 123 aa12.7□□□□□ -0.38
SSH3-201ENST00000308127 NRACQ8N912 160 aa12.7□□□□□ -0.38
SSH3-201ENST00000308127 RPL39LQ96EH5 51 aaKnown RBP12.7□□□□□ -0.38
SSH3-201ENST00000308127 TRBV12-3P01733 135 aa12.69□□□□□ -0.38
SSH3-201ENST00000308127 SIVA1O15304 175 aa12.69□□□□□ -0.38
SSH3-201ENST00000308127 MYOZ3Q8TDC0 251 aa12.69□□□□□ -0.38
SSH3-201ENST00000308127 C16orf92Q96LL3 132 aa12.69□□□□□ -0.38
SSH3-201ENST00000308127 C20orf173Q96LM9 149 aa12.69□□□□□ -0.38
SSH3-201ENST00000308127 CNFNQ9BYD5 112 aa12.69□□□□□ -0.38
SSH3-201ENST00000308127 RPL11P62913 178 aaKnown RBP12.68□□□□□ -0.38
SSH3-201ENST00000308127 ZMAT4Q9H898 229 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms