RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 PDE6DO43924 150 aa17.72■□□□□ 0.43
HOXC9-201ENST00000303450 MIFP14174 115 aa17.72■□□□□ 0.43
HOXC9-201ENST00000303450 SAPCD1Q5SSQ6 148 aa17.72■□□□□ 0.43
HOXC9-201ENST00000303450 NEU1Q99519 415 aa17.72■□□□□ 0.43
HOXC9-201ENST00000303450 KLF12Q9Y4X4 402 aa17.72■□□□□ 0.43
HOXC9-201ENST00000303450 SMIM9A6NGZ8 99 aa17.71■□□□□ 0.43
HOXC9-201ENST00000303450 H7BYZ3 331 aa17.71■□□□□ 0.43
HOXC9-201ENST00000303450 C2CD4CQ8TF44 421 aa17.71■□□□□ 0.43
HOXC9-201ENST00000303450 S100A9P06702 114 aaKnown RBP17.7■□□□□ 0.42
HOXC9-201ENST00000303450 RAB14P61106 215 aa17.7■□□□□ 0.42
HOXC9-201ENST00000303450 TMEM183BQ1AE95 376 aa17.7■□□□□ 0.42
HOXC9-201ENST00000303450 ZNF767PQ75MW2 155 aa17.7■□□□□ 0.42
HOXC9-201ENST00000303450 Q86TA4 180 aa17.7■□□□□ 0.42
HOXC9-201ENST00000303450 STAB2Q8WWQ8 2551 aa17.7■□□□□ 0.42
HOXC9-201ENST00000303450 HTN1P15515 57 aa17.69■□□□□ 0.42
HOXC9-201ENST00000303450 RRN3P1Q2M238 152 aa17.69■□□□□ 0.42
HOXC9-201ENST00000303450 Q8NAQ8 132 aa17.69■□□□□ 0.42
HOXC9-201ENST00000303450 C11orf52Q96A22 123 aa17.69■□□□□ 0.42
HOXC9-201ENST00000303450 IGHV4-28A0A0C4DH34 117 aa17.68■□□□□ 0.42
HOXC9-201ENST00000303450 ZNF324O75467 553 aaPredicted RBP17.68■□□□□ 0.42
HOXC9-201ENST00000303450 TAS2R60P59551 318 aa17.68■□□□□ 0.42
HOXC9-201ENST00000303450 C8orf49Q96NF6 230 aa17.68■□□□□ 0.42
HOXC9-201ENST00000303450 EIF5A2Q9GZV4 153 aaKnown RBP17.68■□□□□ 0.42
HOXC9-201ENST00000303450 A0A0J9YWU9 116 aa17.67■□□□□ 0.42
HOXC9-201ENST00000303450 TRBV6-1A0A0K0K1D8 114 aa17.67■□□□□ 0.42
HOXC9-201ENST00000303450 ZNF705GA8MUZ8 300 aaPredicted RBP17.67■□□□□ 0.42
HOXC9-201ENST00000303450 IFITM2Q01629 132 aa17.67■□□□□ 0.42
HOXC9-201ENST00000303450 TOR2AQ5JU69 321 aa17.67■□□□□ 0.42
HOXC9-201ENST00000303450 ZNF506Q5JVG8 444 aa17.67■□□□□ 0.42
HOXC9-201ENST00000303450 FAM210AQ96ND0 272 aa17.67■□□□□ 0.42
HOXC9-201ENST00000303450 ZFP30Q9Y2G7 519 aa17.67■□□□□ 0.42
HOXC9-201ENST00000303450 DEFB4AO15263 64 aa17.67■□□□□ 0.42
HOXC9-201ENST00000303450 SMUG1Q53HV7 270 aa17.67■□□□□ 0.42
HOXC9-201ENST00000303450 PYGO2Q9BRQ0 406 aa17.67■□□□□ 0.42
HOXC9-201ENST00000303450 MED9Q9NWA0 146 aa17.67■□□□□ 0.42
HOXC9-201ENST00000303450 PRM2P04554 102 aa17.66■□□□□ 0.42
HOXC9-201ENST00000303450 RPL35P42766 123 aaKnown RBP17.66■□□□□ 0.42
HOXC9-201ENST00000303450 Q6AWC8 147 aa17.66■□□□□ 0.42
HOXC9-201ENST00000303450 C11orf68Q9H3H3 251 aaKnown RBP17.66■□□□□ 0.42
HOXC9-201ENST00000303450 RGS13O14921 159 aa17.65■□□□□ 0.42
HOXC9-201ENST00000303450 GCGP01275 180 aa17.65■□□□□ 0.42
HOXC9-201ENST00000303450 LTAP01374 205 aa17.65■□□□□ 0.42
HOXC9-201ENST00000303450 Q6ZQT7 251 aa17.65■□□□□ 0.42
HOXC9-201ENST00000303450 TRAV21A0A0B4J279 112 aa17.64■□□□□ 0.41
HOXC9-201ENST00000303450 DERL1Q9BUN8 251 aa17.64■□□□□ 0.41
HOXC9-201ENST00000303450 EDA2RQ9HAV5 297 aa17.64■□□□□ 0.41
HOXC9-201ENST00000303450 AZU1P20160 251 aa17.62■□□□□ 0.41
HOXC9-201ENST00000303450 ZNF80P51504 273 aaPredicted RBP17.62■□□□□ 0.41
HOXC9-201ENST00000303450 EMP1P54849 157 aa17.62■□□□□ 0.41
HOXC9-201ENST00000303450 BAGE2Q86Y30 109 aa17.62■□□□□ 0.41
HOXC9-201ENST00000303450 TMEM189A5PLL7 270 aa17.62■□□□□ 0.41
HOXC9-201ENST00000303450 TMEM183AQ8IXX5 376 aa17.62■□□□□ 0.41
HOXC9-201ENST00000303450 IGHV1OR15-1A0A075B7D0 117 aa17.61■□□□□ 0.41
HOXC9-201ENST00000303450 CBY3A6NI87 242 aa17.61■□□□□ 0.41
HOXC9-201ENST00000303450 TMEM250H0YL14 139 aa17.61■□□□□ 0.41
HOXC9-201ENST00000303450 PFN1P07737 140 aaKnown RBP17.61■□□□□ 0.41
HOXC9-201ENST00000303450 MUC21Q5SSG8 566 aa17.61■□□□□ 0.41
HOXC9-201ENST00000303450 EIF4E3Q8N5X7 224 aaKnown RBP17.61■□□□□ 0.41
HOXC9-201ENST00000303450 NHLRC2Q8NBF2 726 aa17.61■□□□□ 0.41
HOXC9-201ENST00000303450 LINC00467Q9BRT7 94 aa17.61■□□□□ 0.41
HOXC9-201ENST00000303450 NAGKQ9UJ70 344 aa17.61■□□□□ 0.41
HOXC9-201ENST00000303450 CLLU1Q5K131 121 aa17.6■□□□□ 0.41
HOXC9-201ENST00000303450 FAM159AQ6UWV7 190 aa17.6■□□□□ 0.41
HOXC9-201ENST00000303450 TMEM263Q8WUH6 116 aaKnown RBP17.6■□□□□ 0.41
HOXC9-201ENST00000303450 C16orf74Q96GX8 76 aa17.6■□□□□ 0.41
HOXC9-201ENST00000303450 ZC2HC1AQ96GY0 325 aa17.6■□□□□ 0.41
HOXC9-201ENST00000303450 ZNF493Q6ZR52 646 aa17.59■□□□□ 0.41
HOXC9-201ENST00000303450 COX8CQ7Z4L0 72 aa17.59■□□□□ 0.41
HOXC9-201ENST00000303450 RAB19A4D1S5 217 aa17.58■□□□□ 0.41
HOXC9-201ENST00000303450 CEBPGP53567 150 aa17.58■□□□□ 0.41
HOXC9-201ENST00000303450 CENPWQ5EE01 88 aa17.58■□□□□ 0.41
HOXC9-201ENST00000303450 WWC2-AS2Q96NR7 200 aa17.58■□□□□ 0.41
HOXC9-201ENST00000303450 FABP5P3A8MUU1 101 aa17.57■□□□□ 0.4
HOXC9-201ENST00000303450 NDUFS6O75380 124 aaKnown RBP17.57■□□□□ 0.4
HOXC9-201ENST00000303450 GNG4P50150 75 aa17.57■□□□□ 0.4
HOXC9-201ENST00000303450 ANXA2RQ3ZCQ2 193 aa17.57■□□□□ 0.4
HOXC9-201ENST00000303450 RNASE8Q8TDE3 154 aaKnown RBP17.57■□□□□ 0.4
HOXC9-201ENST00000303450 PEA15Q15121 130 aa17.57■□□□□ 0.4
HOXC9-201ENST00000303450 ZNF674Q2M3X9 581 aa17.57■□□□□ 0.4
HOXC9-201ENST00000303450 MLST8Q9BVC4 326 aa17.57■□□□□ 0.4
HOXC9-201ENST00000303450 FAM162BQ5T6X4 162 aa17.56■□□□□ 0.4
HOXC9-201ENST00000303450 PARLQ9H300 379 aa17.56■□□□□ 0.4
HOXC9-201ENST00000303450 TP53TG3Q9ULZ0 132 aa17.56■□□□□ 0.4
HOXC9-201ENST00000303450 SRP19P09132 144 aaKnown RBP17.55■□□□□ 0.4
HOXC9-201ENST00000303450 TDRG1Q3Y452 100 aa17.55■□□□□ 0.4
HOXC9-201ENST00000303450 C11orf45Q8TAV5 145 aa17.55■□□□□ 0.4
HOXC9-201ENST00000303450 KCNS1Q96KK3 526 aa17.55■□□□□ 0.4
HOXC9-201ENST00000303450 PLAC8L1A1L4L8 177 aa17.54■□□□□ 0.4
HOXC9-201ENST00000303450 CRIP1P50238 77 aa17.54■□□□□ 0.4
HOXC9-201ENST00000303450 IL17DQ8TAD2 202 aa17.54■□□□□ 0.4
HOXC9-201ENST00000303450 SMDT1Q9H4I9 107 aa17.54■□□□□ 0.4
HOXC9-201ENST00000303450 SDF2L1Q9HCN8 221 aa17.54■□□□□ 0.4
HOXC9-201ENST00000303450 CXorf65A6NEN9 183 aa17.53■□□□□ 0.4
HOXC9-201ENST00000303450 SNURFLB1AK76 121 aa17.53■□□□□ 0.4
HOXC9-201ENST00000303450 SH2D1AO60880 128 aa17.53■□□□□ 0.4
HOXC9-201ENST00000303450 SPART-AS1P0CW21 52 aa17.53■□□□□ 0.4
HOXC9-201ENST00000303450 SRSF3P84103 164 aaKnown RBP17.53■□□□□ 0.4
HOXC9-201ENST00000303450 SMIM12Q96EX1 92 aa17.53■□□□□ 0.4
HOXC9-201ENST00000303450 C11orf21Q9P2W6 132 aa17.53■□□□□ 0.4
HOXC9-201ENST00000303450 CELA1Q9UNI1 258 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms