RNA–Protein interactions for RNA: ENST00000301765.9

VPS37C-201, Transcript of VPS37C, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37C, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-201ENST00000301765 RAXQ9Y2V3 346 aa13.12□□□□□ -0.31
VPS37C-201ENST00000301765 IGHV3OR16-8A0A075B7F1 116 aa13.12□□□□□ -0.31
VPS37C-201ENST00000301765 IGKV2-40A0A087WW87 121 aaPredicted RBP13.12□□□□□ -0.31
VPS37C-201ENST00000301765 IGKV2D-40P01614 121 aaPredicted RBP13.12□□□□□ -0.31
VPS37C-201ENST00000301765 TMEM155Q4W5P6 130 aa13.12□□□□□ -0.31
VPS37C-201ENST00000301765 PPP1R27Q86WC6 154 aa13.12□□□□□ -0.31
VPS37C-201ENST00000301765 TMEM158Q8WZ71 300 aa13.12□□□□□ -0.31
VPS37C-201ENST00000301765 LOC107984156A0A0G2JMH3 177 aa13.11□□□□□ -0.31
VPS37C-201ENST00000301765 SH2D1AO60880 128 aa13.11□□□□□ -0.31
VPS37C-201ENST00000301765 ARL17AQ8IVW1 177 aa13.11□□□□□ -0.31
VPS37C-201ENST00000301765 CDIP1Q9H305 208 aa13.11□□□□□ -0.31
VPS37C-201ENST00000301765 PRO0461Q9UI25 63 aa13.11□□□□□ -0.31
VPS37C-201ENST00000301765 CYSLTR1Q9Y271 337 aa13.11□□□□□ -0.31
VPS37C-201ENST00000301765 C3orf36Q3SXR2 165 aa13.11□□□□□ -0.31
VPS37C-201ENST00000301765 TM2D2Q9BX73 214 aa13.11□□□□□ -0.31
VPS37C-201ENST00000301765 I3L2K1 104 aa13.1□□□□□ -0.31
VPS37C-201ENST00000301765 IGHV3-23P01764 117 aa13.1□□□□□ -0.31
VPS37C-201ENST00000301765 NGBQ9NPG2 151 aa13.1□□□□□ -0.31
VPS37C-201ENST00000301765 CRYBG3Q68DQ2 2970 aa13.1□□□□□ -0.31
VPS37C-201ENST00000301765 TRBV19A0A075B6N1 114 aa13.1□□□□□ -0.31
VPS37C-201ENST00000301765 IGHV1-3A0A0C4DH29 117 aa13.1□□□□□ -0.31
VPS37C-201ENST00000301765 TNFRSF13BO14836 293 aaPredicted RBP13.1□□□□□ -0.31
VPS37C-201ENST00000301765 CRYGBP07316 175 aa13.1□□□□□ -0.31
VPS37C-201ENST00000301765 FOXI1Q12951 378 aa13.1□□□□□ -0.31
VPS37C-201ENST00000301765 LINC00311Q8N616 119 aa13.1□□□□□ -0.31
VPS37C-201ENST00000301765 IL4P05112 153 aa13.1□□□□□ -0.31
VPS37C-201ENST00000301765 SIGLEC15Q6ZMC9 328 aa13.1□□□□□ -0.31
VPS37C-201ENST00000301765 KLK15Q9H2R5 256 aa13.1□□□□□ -0.31
VPS37C-201ENST00000301765 UTP20O75691 2785 aaKnown RBP13.09□□□□□ -0.31
VPS37C-201ENST00000301765 K7ENP7 123 aa13.09□□□□□ -0.31
VPS37C-201ENST00000301765 CNIH1O95406 144 aa13.09□□□□□ -0.31
VPS37C-201ENST00000301765 RRN3P1Q2M238 152 aa13.09□□□□□ -0.31
VPS37C-201ENST00000301765 ZNF493Q6ZR52 646 aa13.09□□□□□ -0.31
VPS37C-201ENST00000301765 TTC9CQ8N5M4 171 aa13.09□□□□□ -0.31
VPS37C-201ENST00000301765 PGPEP1Q9NXJ5 209 aa13.09□□□□□ -0.31
VPS37C-201ENST00000301765 DPM2O94777 84 aa13.09□□□□□ -0.31
VPS37C-201ENST00000301765 EGR2P11161 476 aaPredicted RBP13.09□□□□□ -0.31
VPS37C-201ENST00000301765 PSMB2P49721 201 aa13.09□□□□□ -0.31
VPS37C-201ENST00000301765 HIGD1BQ9P298 99 aa13.09□□□□□ -0.31
VPS37C-201ENST00000301765 B5MCH6 92 aa13.08□□□□□ -0.32
VPS37C-201ENST00000301765 IGHV3-35A0A0C4DH35 117 aa13.08□□□□□ -0.32
VPS37C-201ENST00000301765 SMCPP49901 116 aaPredicted RBP13.08□□□□□ -0.32
VPS37C-201ENST00000301765 PVRIGQ6DKI7 326 aa13.08□□□□□ -0.32
VPS37C-201ENST00000301765 ZFP2Q6ZN57 461 aa13.08□□□□□ -0.32
VPS37C-201ENST00000301765 MAP1LC3AQ9H492 121 aa13.08□□□□□ -0.32
VPS37C-201ENST00000301765 U3KQK5 164 aa13.08□□□□□ -0.32
VPS37C-201ENST00000301765 K7EIM0 57 aa13.07□□□□□ -0.32
VPS37C-201ENST00000301765 ORM1P02763 201 aa13.07□□□□□ -0.32
VPS37C-201ENST00000301765 HOXB4P17483 251 aaPredicted RBP13.07□□□□□ -0.32
VPS37C-201ENST00000301765 EFNA4P52798 201 aa13.07□□□□□ -0.32
VPS37C-201ENST00000301765 TRAV26-2A0A0B4J265 109 aa13.07□□□□□ -0.32
VPS37C-201ENST00000301765 A0A1B0GW15 77 aa13.06□□□□□ -0.32
VPS37C-201ENST00000301765 PRSS29PA6NIE9 313 aa13.06□□□□□ -0.32
VPS37C-201ENST00000301765 H3BVH4 76 aa13.06□□□□□ -0.32
VPS37C-201ENST00000301765 HLA-DMBP28068 263 aa13.06□□□□□ -0.32
VPS37C-201ENST00000301765 ZNF80P51504 273 aaPredicted RBP13.06□□□□□ -0.32
VPS37C-201ENST00000301765 Q6ZUT4 128 aa13.06□□□□□ -0.32
VPS37C-201ENST00000301765 KIR2DL4Q99706 377 aa13.06□□□□□ -0.32
VPS37C-201ENST00000301765 CELSR2Q9HCU4 2923 aa13.06□□□□□ -0.32
VPS37C-201ENST00000301765 ZNF491Q8N8L2 437 aa13.06□□□□□ -0.32
VPS37C-201ENST00000301765 ZNF502Q8TBZ5 544 aa13.06□□□□□ -0.32
VPS37C-201ENST00000301765 BUB1B-PAK6H3BSN5 160 aa13.06□□□□□ -0.32
VPS37C-201ENST00000301765 CCL21O00585 134 aa13.06□□□□□ -0.32
VPS37C-201ENST00000301765 TNFRSF6BO95407 300 aa13.06□□□□□ -0.32
VPS37C-201ENST00000301765 ANAPC13Q9BS18 74 aa13.06□□□□□ -0.32
VPS37C-201ENST00000301765 SHANK2-AS3Q9BTD1 123 aa13.06□□□□□ -0.32
VPS37C-201ENST00000301765 IGLV1-47P01700 117 aa13.05□□□□□ -0.32
VPS37C-201ENST00000301765 TMEM14CQ9P0S9 112 aa13.05□□□□□ -0.32
VPS37C-201ENST00000301765 Q6AWC8 147 aa13.05□□□□□ -0.32
VPS37C-201ENST00000301765 DEFB104AQ8WTQ1 72 aa13.05□□□□□ -0.32
VPS37C-201ENST00000301765 RPEQ96AT9 228 aa13.05□□□□□ -0.32
VPS37C-201ENST00000301765 CD3EP07766 207 aa13.04□□□□□ -0.32
VPS37C-201ENST00000301765 RNF125Q96EQ8 232 aa13.04□□□□□ -0.32
VPS37C-201ENST00000301765 C1QTNF4Q9BXJ3 329 aa13.04□□□□□ -0.32
VPS37C-201ENST00000301765 UFC1Q9Y3C8 167 aa13.04□□□□□ -0.32
VPS37C-201ENST00000301765 LINC01549A6NIU2 74 aa13.04□□□□□ -0.32
VPS37C-201ENST00000301765 H3BRN7 92 aa13.04□□□□□ -0.32
VPS37C-201ENST00000301765 MORN3Q6PF18 240 aaPredicted RBP13.04□□□□□ -0.32
VPS37C-201ENST00000301765 TIMM23O14925 209 aa13.03□□□□□ -0.32
VPS37C-201ENST00000301765 GATD1Q8NB37 220 aa13.03□□□□□ -0.32
VPS37C-201ENST00000301765 ZMAT4Q9H898 229 aa13.03□□□□□ -0.32
VPS37C-201ENST00000301765 CENPEQ02224 2701 aa13.03□□□□□ -0.32
VPS37C-201ENST00000301765 CFAP46Q8IYW2 2715 aa13.03□□□□□ -0.32
VPS37C-201ENST00000301765 MRPS12O15235 138 aaKnown RBP13.03□□□□□ -0.32
VPS37C-201ENST00000301765 HLA-DRB4P13762 266 aa13.03□□□□□ -0.32
VPS37C-201ENST00000301765 RNF185Q96GF1 192 aa13.03□□□□□ -0.32
VPS37C-201ENST00000301765 HLA-DRB4X5D2U9 266 aa13.03□□□□□ -0.32
VPS37C-201ENST00000301765 FLNCQ14315 2725 aa13.02□□□□□ -0.32
VPS37C-201ENST00000301765 KLRD1Q13241 179 aa13.02□□□□□ -0.33
VPS37C-201ENST00000301765 HOXA3O43365 443 aaPredicted RBP13.02□□□□□ -0.33
VPS37C-201ENST00000301765 C8orf31Q8N9H6 132 aa13.02□□□□□ -0.33
VPS37C-201ENST00000301765 ONECUT1Q9UBC0 465 aa13.02□□□□□ -0.33
VPS37C-201ENST00000301765 TRBV20-1A0A075B6N2 111 aa13.01□□□□□ -0.33
VPS37C-201ENST00000301765 NCBP2LA6PVI3 153 aaKnown RBP13.01□□□□□ -0.33
VPS37C-201ENST00000301765 CFAP126Q5VTH2 177 aa13.01□□□□□ -0.33
VPS37C-201ENST00000301765 SHISA2Q6UWI4 295 aa13.01□□□□□ -0.33
VPS37C-201ENST00000301765 SPRY2O43597 315 aa13□□□□□ -0.33
VPS37C-201ENST00000301765 TSPAN13O95857 204 aa13□□□□□ -0.33
VPS37C-201ENST00000301765 VKORC1Q9BQB6 163 aa13□□□□□ -0.33
VPS37C-201ENST00000301765 AAMDCQ9H7C9 122 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms