RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 IGHV1OR15-1A0A075B7D0 117 aa11.85□□□□□ -0.51
SCN3B-201ENST00000299333 ORMDL1Q9P0S3 153 aa11.85□□□□□ -0.51
SCN3B-201ENST00000299333 BRCA1P38398 1863 aaKnown RBP11.85□□□□□ -0.51
SCN3B-201ENST00000299333 CFHR4Q92496 578 aa11.85□□□□□ -0.51
SCN3B-201ENST00000299333 ZNF493Q6ZR52 646 aa11.85□□□□□ -0.51
SCN3B-201ENST00000299333 NDUFV3P56181 108 aaKnown RBP11.85□□□□□ -0.51
SCN3B-201ENST00000299333 TEX36Q5VZQ5 186 aa11.85□□□□□ -0.51
SCN3B-201ENST00000299333 SPANXB1Q9NS25 103 aaPredicted RBP11.85□□□□□ -0.51
SCN3B-201ENST00000299333 HERVK_113P63121 156 aa11.84□□□□□ -0.51
SCN3B-201ENST00000299333 CR1LQ2VPA4 569 aa11.84□□□□□ -0.51
SCN3B-201ENST00000299333 PLXNA1Q9UIW2 1896 aa11.84□□□□□ -0.51
SCN3B-201ENST00000299333 POLR2AP24928 1970 aaKnown RBP11.84□□□□□ -0.51
SCN3B-201ENST00000299333 NDUFC2-KCTD14E9PQ53 114 aa11.84□□□□□ -0.51
SCN3B-201ENST00000299333 M0QXV9 152 aa11.84□□□□□ -0.51
SCN3B-201ENST00000299333 COLQQ9Y215 455 aaPredicted RBP11.84□□□□□ -0.51
SCN3B-201ENST00000299333 DOCK10Q96BY6 2186 aa11.84□□□□□ -0.51
SCN3B-201ENST00000299333 FAM120AOSQ5T036 256 aa11.84□□□□□ -0.51
SCN3B-201ENST00000299333 LOC285556D6RIA3 1793 aa11.83□□□□□ -0.51
SCN3B-201ENST00000299333 SCN10AQ9Y5Y9 1956 aa11.83□□□□□ -0.52
SCN3B-201ENST00000299333 ABCA1O95477 2261 aa11.83□□□□□ -0.52
SCN3B-201ENST00000299333 ATP6V0E1O15342 81 aa11.83□□□□□ -0.52
SCN3B-201ENST00000299333 IGFBPL1Q8WX77 278 aa11.83□□□□□ -0.52
SCN3B-201ENST00000299333 ZNF883P0CG24 379 aa11.83□□□□□ -0.52
SCN3B-201ENST00000299333 CFPP27918 469 aa11.83□□□□□ -0.52
SCN3B-201ENST00000299333 C11orf52Q96A22 123 aa11.83□□□□□ -0.52
SCN3B-201ENST00000299333 PYGO2Q9BRQ0 406 aa11.83□□□□□ -0.52
SCN3B-201ENST00000299333 SDK2Q58EX2 2172 aa11.83□□□□□ -0.52
SCN3B-201ENST00000299333 NCOR1O75376 2440 aa11.83□□□□□ -0.52
SCN3B-201ENST00000299333 NUPR1O60356 82 aa11.83□□□□□ -0.52
SCN3B-201ENST00000299333 FAM236DA0A1B0GTK5 79 aa11.82□□□□□ -0.52
SCN3B-201ENST00000299333 H3BRN7 92 aa11.82□□□□□ -0.52
SCN3B-201ENST00000299333 FAM236CP0DP71 79 aa11.82□□□□□ -0.52
SCN3B-201ENST00000299333 DEFB105AQ8NG35 78 aa11.82□□□□□ -0.52
SCN3B-201ENST00000299333 FXYD5Q96DB9 178 aa11.82□□□□□ -0.52
SCN3B-201ENST00000299333 NYNRINQ9P2P1 1898 aaKnown RBP11.82□□□□□ -0.52
SCN3B-201ENST00000299333 COL8A2P25067 703 aa11.82□□□□□ -0.52
SCN3B-201ENST00000299333 PTH2Q96A98 100 aa11.82□□□□□ -0.52
SCN3B-201ENST00000299333 PDCD11Q14690 1871 aaKnown RBP11.82□□□□□ -0.52
SCN3B-201ENST00000299333 SAA4P35542 130 aa11.82□□□□□ -0.52
SCN3B-201ENST00000299333 C20orf78Q9BR46 151 aa11.82□□□□□ -0.52
SCN3B-201ENST00000299333 PRDM6Q9NQX0 595 aa11.82□□□□□ -0.52
SCN3B-201ENST00000299333 LY6HO94772 140 aa11.82□□□□□ -0.52
SCN3B-201ENST00000299333 FANCMQ8IYD8 2048 aa11.82□□□□□ -0.52
SCN3B-201ENST00000299333 ZFP2Q6ZN57 461 aa11.82□□□□□ -0.52
SCN3B-201ENST00000299333 TMEM14CQ9P0S9 112 aa11.81□□□□□ -0.52
SCN3B-201ENST00000299333 FHL1Q13642 323 aa11.81□□□□□ -0.52
SCN3B-201ENST00000299333 CLPSL2Q6UWE3 100 aa11.81□□□□□ -0.52
SCN3B-201ENST00000299333 Q9H8V8 135 aa11.81□□□□□ -0.52
SCN3B-201ENST00000299333 FAM110DQ8TAY7 271 aaPredicted RBP11.81□□□□□ -0.52
SCN3B-201ENST00000299333 LINC00173Q6ZV60 143 aa11.81□□□□□ -0.52
SCN3B-201ENST00000299333 LTAP01374 205 aa11.8□□□□□ -0.52
SCN3B-201ENST00000299333 WIPF2Q8TF74 440 aaPredicted RBP11.8□□□□□ -0.52
SCN3B-201ENST00000299333 MLST8Q9BVC4 326 aa11.8□□□□□ -0.52
SCN3B-201ENST00000299333 CSRP2Q16527 193 aa11.8□□□□□ -0.52
SCN3B-201ENST00000299333 C10orf105Q8TEF2 133 aa11.8□□□□□ -0.52
SCN3B-201ENST00000299333 ANKRD39Q53RE8 183 aa11.8□□□□□ -0.52
SCN3B-201ENST00000299333 Q6ZUT4 128 aa11.8□□□□□ -0.52
SCN3B-201ENST00000299333 G3V318 75 aa11.79□□□□□ -0.52
SCN3B-201ENST00000299333 Q71RC1 249 aaPredicted RBP11.79□□□□□ -0.52
SCN3B-201ENST00000299333 RNF152Q8N8N0 203 aa11.79□□□□□ -0.52
SCN3B-201ENST00000299333 UQCRQO14949 82 aa11.79□□□□□ -0.52
SCN3B-201ENST00000299333 MT-ATP8P03928 68 aa11.79□□□□□ -0.52
SCN3B-201ENST00000299333 LYPD6Q86Y78 171 aa11.79□□□□□ -0.52
SCN3B-201ENST00000299333 ZFP36L1Q07352 338 aaKnown RBP11.79□□□□□ -0.52
SCN3B-201ENST00000299333 IGHV4-28A0A0C4DH34 117 aa11.79□□□□□ -0.52
SCN3B-201ENST00000299333 DEFB121Q5J5C9 76 aa11.79□□□□□ -0.52
SCN3B-201ENST00000299333 C16orf54Q6UWD8 224 aa11.79□□□□□ -0.52
SCN3B-201ENST00000299333 FOXL2NBQ6ZUU3 175 aa11.79□□□□□ -0.52
SCN3B-201ENST00000299333 RNF166Q96A37 237 aaPredicted RBP11.79□□□□□ -0.52
SCN3B-201ENST00000299333 ARFGEF3Q5TH69 2177 aa11.79□□□□□ -0.52
SCN3B-201ENST00000299333 KIAA2026Q5HYC2 2103 aa11.79□□□□□ -0.52
SCN3B-201ENST00000299333 IGHV4-4A0A075B6R2 117 aa11.78□□□□□ -0.52
SCN3B-201ENST00000299333 A0A096LPF7 62 aa11.78□□□□□ -0.52
SCN3B-201ENST00000299333 GATA1P15976 413 aaPredicted RBP11.78□□□□□ -0.52
SCN3B-201ENST00000299333 CXCL5P42830 114 aa11.78□□□□□ -0.52
SCN3B-201ENST00000299333 WT1-ASQ06250 92 aa11.78□□□□□ -0.52
SCN3B-201ENST00000299333 VOPP1Q96AW1 172 aa11.78□□□□□ -0.52
SCN3B-201ENST00000299333 Q0VFX4 171 aa11.78□□□□□ -0.52
SCN3B-201ENST00000299333 C1orf147Q96MC9 270 aaPredicted RBP11.78□□□□□ -0.52
SCN3B-201ENST00000299333 BUB3O43684 328 aa11.78□□□□□ -0.52
SCN3B-201ENST00000299333 FXYD2P54710 66 aa11.78□□□□□ -0.52
SCN3B-201ENST00000299333 ICOSQ9Y6W8 199 aa11.78□□□□□ -0.52
SCN3B-201ENST00000299333 B4DSR2 109 aa11.77□□□□□ -0.52
SCN3B-201ENST00000299333 RUSC1-AS1Q66K80 236 aa11.77□□□□□ -0.52
SCN3B-201ENST00000299333 TPSG1Q9NRR2 321 aa11.77□□□□□ -0.52
SCN3B-201ENST00000299333 ATP5G1P05496 136 aa11.77□□□□□ -0.52
SCN3B-201ENST00000299333 LCTP09848 1927 aa11.77□□□□□ -0.52
SCN3B-201ENST00000299333 COA6Q5JTJ3 125 aaKnown RBP11.77□□□□□ -0.53
SCN3B-201ENST00000299333 ZNF833PQ6ZTB9 187 aa11.77□□□□□ -0.53
SCN3B-201ENST00000299333 C17orf77Q96MU5 243 aa11.77□□□□□ -0.53
SCN3B-201ENST00000299333 C20orf197Q8N268 126 aa11.77□□□□□ -0.53
SCN3B-201ENST00000299333 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.76□□□□□ -0.53
SCN3B-201ENST00000299333 IGKV2-29A2NJV5 120 aaPredicted RBP11.76□□□□□ -0.53
SCN3B-201ENST00000299333 B3GALT5-AS1P59052 145 aa11.76□□□□□ -0.53
SCN3B-201ENST00000299333 DYNAPQ8N1N2 210 aa11.76□□□□□ -0.53
SCN3B-201ENST00000299333 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.76□□□□□ -0.53
SCN3B-201ENST00000299333 A4D1N5 150 aa11.76□□□□□ -0.53
SCN3B-201ENST00000299333 LINC01620Q4KN68 170 aa11.76□□□□□ -0.53
SCN3B-201ENST00000299333 K7EM74 188 aa11.76□□□□□ -0.53
SCN3B-201ENST00000299333 TRBV12-3P01733 135 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms