RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 PPP1R14DQ9NXH3 145 aa17.18■□□□□ 0.34
VSTM4-201ENST00000298454 SSTP61278 116 aa17.16■□□□□ 0.34
VSTM4-201ENST00000298454 OR10J3Q5JRS4 329 aa17.16■□□□□ 0.34
VSTM4-201ENST00000298454 OR10J6PQ8NGY7 276 aa17.16■□□□□ 0.34
VSTM4-201ENST00000298454 TMEM18Q96B42 140 aa17.16■□□□□ 0.34
VSTM4-201ENST00000298454 DUX3Q96PT4 197 aa17.16■□□□□ 0.34
VSTM4-201ENST00000298454 RIGQ13278 110 aa17.16■□□□□ 0.34
VSTM4-201ENST00000298454 KLF5Q13887 457 aaPredicted RBP17.16■□□□□ 0.34
VSTM4-201ENST00000298454 TFPI2P48307 235 aa17.15■□□□□ 0.34
VSTM4-201ENST00000298454 Q6ZQT7 251 aa17.15■□□□□ 0.34
VSTM4-201ENST00000298454 OR11H1Q8NG94 326 aa17.15■□□□□ 0.34
VSTM4-201ENST00000298454 LINC00477Q96M19 166 aa17.15■□□□□ 0.34
VSTM4-201ENST00000298454 RCHY1Q96PM5 261 aa17.15■□□□□ 0.34
VSTM4-201ENST00000298454 MS4A6AQ9H2W1 248 aa17.15■□□□□ 0.34
VSTM4-201ENST00000298454 C11orf21Q9P2W6 132 aa17.15■□□□□ 0.34
VSTM4-201ENST00000298454 MUC21A0A0G2JKD1 596 aa17.15■□□□□ 0.34
VSTM4-201ENST00000298454 MUC21A0A140T8X8 626 aa17.15■□□□□ 0.34
VSTM4-201ENST00000298454 C2orf70A6NJV1 201 aa17.15■□□□□ 0.34
VSTM4-201ENST00000298454 RPS20P60866 119 aaKnown RBP17.15■□□□□ 0.34
VSTM4-201ENST00000298454 SRSF2Q01130 221 aaKnown RBP17.15■□□□□ 0.34
VSTM4-201ENST00000298454 HIST1H1AQ02539 215 aaPredicted RBP17.15■□□□□ 0.34
VSTM4-201ENST00000298454 MUC21Q5SSG8 566 aa17.15■□□□□ 0.34
VSTM4-201ENST00000298454 PRR9Q5T870 116 aa17.15■□□□□ 0.34
VSTM4-201ENST00000298454 C4orf3Q8WVX3 66 aa17.15■□□□□ 0.34
VSTM4-201ENST00000298454 ALKBH7Q9BT30 221 aaPredicted RBP17.15■□□□□ 0.34
VSTM4-201ENST00000298454 NIT2Q9NQR4 276 aa17.15■□□□□ 0.34
VSTM4-201ENST00000298454 IQCJQ1A5X6 159 aa17.14■□□□□ 0.33
VSTM4-201ENST00000298454 OR8A1Q8NGG7 326 aa17.14■□□□□ 0.33
VSTM4-201ENST00000298454 LINC01559Q495D7 138 aa17.13■□□□□ 0.33
VSTM4-201ENST00000298454 C18orf32Q8TCD1 76 aa17.13■□□□□ 0.33
VSTM4-201ENST00000298454 IGKV3D-20A0A0C4DH25 116 aa17.13■□□□□ 0.33
VSTM4-201ENST00000298454 LINC01619G3V211 115 aa17.13■□□□□ 0.33
VSTM4-201ENST00000298454 J3KRW8 73 aa17.13■□□□□ 0.33
VSTM4-201ENST00000298454 ESDP10768 282 aa17.13■□□□□ 0.33
VSTM4-201ENST00000298454 CDPF1Q6NVV7 123 aa17.13■□□□□ 0.33
VSTM4-201ENST00000298454 FER1L6-AS1Q8NA97 138 aa17.13■□□□□ 0.33
VSTM4-201ENST00000298454 KLHL30-AS1Q8NEE0 82 aa17.13■□□□□ 0.33
VSTM4-201ENST00000298454 BORCS7Q96B45 105 aa17.13■□□□□ 0.33
VSTM4-201ENST00000298454 PCP4L1A6NKN8 68 aa17.12■□□□□ 0.33
VSTM4-201ENST00000298454 IGLC6P0CF74 106 aa17.12■□□□□ 0.33
VSTM4-201ENST00000298454 ID1P41134 155 aa17.12■□□□□ 0.33
VSTM4-201ENST00000298454 ADAMTSL5Q6ZMM2 481 aa17.12■□□□□ 0.33
VSTM4-201ENST00000298454 LENEPQ9Y5L5 61 aa17.12■□□□□ 0.33
VSTM4-201ENST00000298454 NF1P21359 2839 aa17.12■□□□□ 0.33
VSTM4-201ENST00000298454 RNASE1P07998 156 aaKnown RBP17.12■□□□□ 0.33
VSTM4-201ENST00000298454 ZFAND2AQ8N6M9 145 aa17.11■□□□□ 0.33
VSTM4-201ENST00000298454 C11orf44Q8N8P7 122 aa17.11■□□□□ 0.33
VSTM4-201ENST00000298454 OR1N2Q8NGR9 330 aa17.11■□□□□ 0.33
VSTM4-201ENST00000298454 DPF1Q92782 380 aa17.11■□□□□ 0.33
VSTM4-201ENST00000298454 TMEM160Q9NX00 188 aa17.11■□□□□ 0.33
VSTM4-201ENST00000298454 LOC102724200A0A096LPH7 203 aaPredicted RBP17.1■□□□□ 0.33
VSTM4-201ENST00000298454 CTRLP40313 264 aa17.1■□□□□ 0.33
VSTM4-201ENST00000298454 SAMD13Q5VXD3 122 aa17.1■□□□□ 0.33
VSTM4-201ENST00000298454 GATD1Q8NB37 220 aa17.1■□□□□ 0.33
VSTM4-201ENST00000298454 A0A1B0GW15 77 aa17.09■□□□□ 0.33
VSTM4-201ENST00000298454 LY6G6DO95868 133 aa17.09■□□□□ 0.33
VSTM4-201ENST00000298454 ZNF688P0C7X2 276 aa17.09■□□□□ 0.33
VSTM4-201ENST00000298454 SCGB2A2Q13296 93 aa17.09■□□□□ 0.33
VSTM4-201ENST00000298454 FAM19A4Q96LR4 140 aa17.09■□□□□ 0.33
VSTM4-201ENST00000298454 MTORP42345 2549 aa17.09■□□□□ 0.33
VSTM4-201ENST00000298454 K7EQG2 157 aa17.08■□□□□ 0.33
VSTM4-201ENST00000298454 PSMG4Q5JS54 123 aa17.08■□□□□ 0.32
VSTM4-201ENST00000298454 ZNF418Q8TF45 676 aaPredicted RBP17.08■□□□□ 0.32
VSTM4-201ENST00000298454 M0QZ24 198 aa17.07■□□□□ 0.32
VSTM4-201ENST00000298454 KIR3DS1Q14943 382 aa17.07■□□□□ 0.32
VSTM4-201ENST00000298454 LINC01006Q8NI28 216 aa17.07■□□□□ 0.32
VSTM4-201ENST00000298454 DLX4Q92988 240 aaPredicted RBP17.07■□□□□ 0.32
VSTM4-201ENST00000298454 OTOGQ6ZRI0 2925 aa17.07■□□□□ 0.32
VSTM4-201ENST00000298454 NOTCH2Q04721 2471 aa17.07■□□□□ 0.32
VSTM4-201ENST00000298454 CD28P10747 220 aa17.06■□□□□ 0.32
VSTM4-201ENST00000298454 NTF3P20783 257 aa17.06■□□□□ 0.32
VSTM4-201ENST00000298454 HILS1P60008 231 aa17.06■□□□□ 0.32
VSTM4-201ENST00000298454 PAFAH1B2P68402 229 aa17.06■□□□□ 0.32
VSTM4-201ENST00000298454 TWIST1Q15672 202 aa17.06■□□□□ 0.32
VSTM4-201ENST00000298454 ZNF493Q6ZR52 646 aa17.06■□□□□ 0.32
VSTM4-201ENST00000298454 OR9G4Q8NGQ1 327 aa17.06■□□□□ 0.32
VSTM4-201ENST00000298454 KCNS1Q96KK3 526 aa17.06■□□□□ 0.32
VSTM4-201ENST00000298454 SAMD10Q9BYL1 202 aa17.06■□□□□ 0.32
VSTM4-201ENST00000298454 CD33P20138 364 aa17.06■□□□□ 0.32
VSTM4-201ENST00000298454 JOSD1Q15040 202 aaPredicted RBP17.06■□□□□ 0.32
VSTM4-201ENST00000298454 A0A1W2PRX2 142 aa17.05■□□□□ 0.32
VSTM4-201ENST00000298454 GPX1P07203 203 aa17.05■□□□□ 0.32
VSTM4-201ENST00000298454 SNRPD3P62318 126 aaKnown RBP17.05■□□□□ 0.32
VSTM4-201ENST00000298454 C16orf95Q9H693 158 aa17.05■□□□□ 0.32
VSTM4-201ENST00000298454 MSRB1Q9NZV6 116 aa17.05■□□□□ 0.32
VSTM4-201ENST00000298454 WFDC12Q8WWY7 111 aa17.04■□□□□ 0.32
VSTM4-201ENST00000298454 PEMTQ9UBM1 199 aa17.04■□□□□ 0.32
VSTM4-201ENST00000298454 NAGKQ9UJ70 344 aa17.04■□□□□ 0.32
VSTM4-201ENST00000298454 PMCHP20382 165 aa17.04■□□□□ 0.32
VSTM4-201ENST00000298454 RNASE4P34096 147 aaKnown RBP17.04■□□□□ 0.32
VSTM4-201ENST00000298454 CNFNQ9BYD5 112 aa17.04■□□□□ 0.32
VSTM4-201ENST00000298454 APRG1Q8IVJ8 170 aa17.03■□□□□ 0.32
VSTM4-201ENST00000298454 AMN1Q8IY45 258 aa17.03■□□□□ 0.32
VSTM4-201ENST00000298454 TRAV21A0A0B4J279 112 aa17.02■□□□□ 0.32
VSTM4-201ENST00000298454 AMTP48728 403 aa17.02■□□□□ 0.32
VSTM4-201ENST00000298454 Q6ZWC4 215 aa17.02■□□□□ 0.32
VSTM4-201ENST00000298454 URB1-AS1Q96HZ7 61 aa17.02■□□□□ 0.32
VSTM4-201ENST00000298454 RAX2Q96IS3 184 aa17.02■□□□□ 0.32
VSTM4-201ENST00000298454 FAM19A2Q8N3H0 131 aa17.02■□□□□ 0.31
VSTM4-201ENST00000298454 CITED2Q99967 270 aaPredicted RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms