RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 TBX6O95947 436 aaPredicted RBP9.76□□□□□ -0.85
PCF11-201ENST00000298281 NOP10Q9NPE3 64 aaKnown RBP9.76□□□□□ -0.85
PCF11-201ENST00000298281 BUB1B-PAK6H3BSN5 160 aa9.75□□□□□ -0.85
PCF11-201ENST00000298281 FLVCR1-AS1Q8TAF5 88 aa9.75□□□□□ -0.85
PCF11-201ENST00000298281 CD59P13987 128 aa9.75□□□□□ -0.85
PCF11-201ENST00000298281 FOXE3Q13461 319 aa9.75□□□□□ -0.85
PCF11-201ENST00000298281 TMEM131Q92545 1883 aa9.75□□□□□ -0.85
PCF11-201ENST00000298281 H0YJW9 148 aa9.75□□□□□ -0.85
PCF11-201ENST00000298281 LYPD3O95274 346 aa9.75□□□□□ -0.85
PCF11-201ENST00000298281 PRR4Q16378 134 aa9.75□□□□□ -0.85
PCF11-201ENST00000298281 AMN1Q8IY45 258 aa9.75□□□□□ -0.85
PCF11-201ENST00000298281 COX7B2Q8TF08 81 aa9.75□□□□□ -0.85
PCF11-201ENST00000298281 NUP35Q8NFH5 326 aa9.75□□□□□ -0.85
PCF11-201ENST00000298281 TECTAO75443 2155 aa9.75□□□□□ -0.85
PCF11-201ENST00000298281 BOD1L2Q8IYS8 172 aa9.74□□□□□ -0.85
PCF11-201ENST00000298281 HERV-K104P63124 156 aa9.74□□□□□ -0.85
PCF11-201ENST00000298281 HIGD2BQ4VC39 106 aa9.74□□□□□ -0.85
PCF11-201ENST00000298281 NMSQ5H8A3 153 aa9.74□□□□□ -0.85
PCF11-201ENST00000298281 ATRAIDQ6UW56 229 aa9.74□□□□□ -0.85
PCF11-201ENST00000298281 ARMS2P0C7Q2 107 aa9.74□□□□□ -0.85
PCF11-201ENST00000298281 NREPQ16612 68 aa9.74□□□□□ -0.85
PCF11-201ENST00000298281 CAMK2N2Q96S95 79 aa9.74□□□□□ -0.85
PCF11-201ENST00000298281 NYNRINQ9P2P1 1898 aaKnown RBP9.74□□□□□ -0.85
PCF11-201ENST00000298281 OVOL3O00110 214 aa9.74□□□□□ -0.85
PCF11-201ENST00000298281 ZC2HC1BQ5TFG8 222 aa9.74□□□□□ -0.85
PCF11-201ENST00000298281 EXPH5Q8NEV8 1989 aa9.74□□□□□ -0.85
PCF11-201ENST00000298281 IGKV1-12A0A0C4DH73 117 aa9.74□□□□□ -0.85
PCF11-201ENST00000298281 Q6ZS49 121 aa9.73□□□□□ -0.85
PCF11-201ENST00000298281 BRK1Q8WUW1 75 aa9.73□□□□□ -0.85
PCF11-201ENST00000298281 NRXN2Q9P2S2 1712 aa9.73□□□□□ -0.85
PCF11-201ENST00000298281 IGLV10-54A0A075B6I4 117 aa9.73□□□□□ -0.85
PCF11-201ENST00000298281 IGHV3-30P01768 117 aa9.73□□□□□ -0.85
PCF11-201ENST00000298281 IGHV3-33P01772 117 aa9.73□□□□□ -0.85
PCF11-201ENST00000298281 IGHV3-30-3P0DP02 117 aa9.73□□□□□ -0.85
PCF11-201ENST00000298281 IGHV3-30-5P0DP03 117 aa9.73□□□□□ -0.85
PCF11-201ENST00000298281 TMEM141Q96I45 108 aa9.73□□□□□ -0.85
PCF11-201ENST00000298281 GFRA4Q9GZZ7 299 aa9.73□□□□□ -0.85
PCF11-201ENST00000298281 DENND4CQ5VZ89 1909 aa9.73□□□□□ -0.85
PCF11-201ENST00000298281 COL4A5P29400 1685 aa9.73□□□□□ -0.85
PCF11-201ENST00000298281 PINLYPA6NC86 204 aa9.73□□□□□ -0.85
PCF11-201ENST00000298281 C10orf55Q5SWW7 151 aa9.73□□□□□ -0.85
PCF11-201ENST00000298281 DYNAPQ8N1N2 210 aa9.73□□□□□ -0.85
PCF11-201ENST00000298281 RNF138Q8WVD3 245 aa9.73□□□□□ -0.85
PCF11-201ENST00000298281 WFDC1Q9HC57 220 aa9.73□□□□□ -0.85
PCF11-201ENST00000298281 NDUFB8O95169 186 aa9.72□□□□□ -0.85
PCF11-201ENST00000298281 Q0VFX4 171 aa9.72□□□□□ -0.85
PCF11-201ENST00000298281 HIST3H2BBQ8N257 126 aa9.72□□□□□ -0.85
PCF11-201ENST00000298281 RPP25LQ8N5L8 163 aaKnown RBP9.72□□□□□ -0.85
PCF11-201ENST00000298281 CARD19Q96LW7 228 aa9.72□□□□□ -0.85
PCF11-201ENST00000298281 MSMBP08118 114 aa9.72□□□□□ -0.85
PCF11-201ENST00000298281 FGFBP3Q8TAT2 258 aa9.72□□□□□ -0.85
PCF11-201ENST00000298281 PRR15LQ9BU68 103 aa9.72□□□□□ -0.85
PCF11-201ENST00000298281 KIF26AQ9ULI4 1882 aaPredicted RBP9.72□□□□□ -0.85
PCF11-201ENST00000298281 A0A1B0GUS0 222 aa9.72□□□□□ -0.85
PCF11-201ENST00000298281 IGKV1D-8A0A087WSZ0 117 aa9.72□□□□□ -0.85
PCF11-201ENST00000298281 HERVK_113P63121 156 aa9.72□□□□□ -0.85
PCF11-201ENST00000298281 SPANXDQ9BXN6 97 aa9.72□□□□□ -0.85
PCF11-201ENST00000298281 LY6HO94772 140 aa9.71□□□□□ -0.85
PCF11-201ENST00000298281 CTSGP08311 255 aa9.71□□□□□ -0.85
PCF11-201ENST00000298281 IGHV1OR15-1A0A075B7D0 117 aa9.71□□□□□ -0.85
PCF11-201ENST00000298281 C1orf194Q5T5A4 169 aa9.71□□□□□ -0.85
PCF11-201ENST00000298281 IGHV4-59P01825 116 aa9.71□□□□□ -0.86
PCF11-201ENST00000298281 CD177Q8N6Q3 437 aa9.71□□□□□ -0.86
PCF11-201ENST00000298281 UBE2D4Q9Y2X8 147 aa9.71□□□□□ -0.86
PCF11-201ENST00000298281 C17orf82Q86X59 251 aaPredicted RBP9.71□□□□□ -0.86
PCF11-201ENST00000298281 HOXB4P17483 251 aaPredicted RBP9.7□□□□□ -0.86
PCF11-201ENST00000298281 ZNF664Q8N3J9 261 aa9.7□□□□□ -0.86
PCF11-201ENST00000298281 B9D2Q9BPU9 175 aa9.7□□□□□ -0.86
PCF11-201ENST00000298281 BVES-AS1Q5T3Y7 98 aa9.7□□□□□ -0.86
PCF11-201ENST00000298281 A0A0G2JNJ9 132 aa9.7□□□□□ -0.86
PCF11-201ENST00000298281 C3orf22Q8N5N4 141 aa9.7□□□□□ -0.86
PCF11-201ENST00000298281 Q9UFV3 132 aa9.7□□□□□ -0.86
PCF11-201ENST00000298281 BAALC-AS2P0C853 105 aa9.7□□□□□ -0.86
PCF11-201ENST00000298281 SPATA31B1PQ5VZV4 182 aa9.7□□□□□ -0.86
PCF11-201ENST00000298281 ANAPC1Q9H1A4 1944 aa9.7□□□□□ -0.86
PCF11-201ENST00000298281 FAM231BA6NCW3 169 aa9.7□□□□□ -0.86
PCF11-201ENST00000298281 SYS1-DBNDD2H3BUS1 97 aa9.7□□□□□ -0.86
PCF11-201ENST00000298281 PFN1P07737 140 aaKnown RBP9.7□□□□□ -0.86
PCF11-201ENST00000298281 SRSF3P84103 164 aaKnown RBP9.69□□□□□ -0.86
PCF11-201ENST00000298281 GAFA1Q96PS6 74 aa9.69□□□□□ -0.86
PCF11-201ENST00000298281 TSSC4Q9Y5U2 329 aaPredicted RBP9.69□□□□□ -0.86
PCF11-201ENST00000298281 SMIM27A0A1W2PRY6 76 aa9.69□□□□□ -0.86
PCF11-201ENST00000298281 Q6ZS92 163 aa9.69□□□□□ -0.86
PCF11-201ENST00000298281 NDUFA12Q9UI09 145 aa9.69□□□□□ -0.86
PCF11-201ENST00000298281 CSPG4Q6UVK1 2322 aa9.69□□□□□ -0.86
PCF11-201ENST00000298281 J3QKU1 62 aa9.69□□□□□ -0.86
PCF11-201ENST00000298281 CDKN1BP46527 198 aa9.69□□□□□ -0.86
PCF11-201ENST00000298281 GLRX5Q86SX6 157 aa9.69□□□□□ -0.86
PCF11-201ENST00000298281 C8orf49Q96NF6 230 aa9.69□□□□□ -0.86
PCF11-201ENST00000298281 KIR2DL5BQ8NHK3 375 aa9.68□□□□□ -0.86
PCF11-201ENST00000298281 LOC105371267A0A1B0GV96 52 aa9.68□□□□□ -0.86
PCF11-201ENST00000298281 C5orf38Q86SI9 138 aa9.68□□□□□ -0.86
PCF11-201ENST00000298281 IGKV1-27A0A075B6S5 117 aa9.68□□□□□ -0.86
PCF11-201ENST00000298281 PSMB8P28062 276 aa9.68□□□□□ -0.86
PCF11-201ENST00000298281 Q6P435 159 aa9.68□□□□□ -0.86
PCF11-201ENST00000298281 PRSS57Q6UWY2 283 aa9.68□□□□□ -0.86
PCF11-201ENST00000298281 SHANK2-AS3Q9BTD1 123 aa9.68□□□□□ -0.86
PCF11-201ENST00000298281 CCL24O00175 119 aa9.68□□□□□ -0.86
PCF11-201ENST00000298281 C9orf66Q5T8R8 295 aa9.68□□□□□ -0.86
PCF11-201ENST00000298281 GFI1Q99684 422 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms